RNA–Protein interactions for RNA: ENST00000637223.1

CLN6-218, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-218ENST00000637223 ACRP10323 421 aa19.13■□□□□ 0.65
CLN6-218ENST00000637223 DNM2P50570 870 aa19.13■□□□□ 0.65
CLN6-218ENST00000637223 EPHB4P54760 987 aa19.13■□□□□ 0.65
CLN6-218ENST00000637223 PPIGQ13427 754 aaKnown RBP eCLIP19.13■□□□□ 0.657e-7■□□□□ 9.4
CLN6-218ENST00000637223 KIZQ2M2Z5 673 aa19.13■□□□□ 0.65
CLN6-218ENST00000637223 TPRNQ4KMQ1 711 aa19.13■□□□□ 0.65
CLN6-218ENST00000637223 FAM26DQ5JW98 314 aa19.13■□□□□ 0.65
CLN6-218ENST00000637223 IER5Q5VY09 327 aa19.13■□□□□ 0.65
CLN6-218ENST00000637223 EXOC8Q8IYI6 725 aa19.13■□□□□ 0.65
CLN6-218ENST00000637223 PANK2Q9BZ23 570 aa19.13■□□□□ 0.65
CLN6-218ENST00000637223 OSBPL7Q9BZF2 842 aa19.13■□□□□ 0.65
CLN6-218ENST00000637223 SEMA6BQ9H3T3 888 aa19.13■□□□□ 0.65
CLN6-218ENST00000637223 CCDC39Q9UFE4 941 aa19.13■□□□□ 0.65
CLN6-218ENST00000637223 TRPV2Q9Y5S1 764 aa19.13■□□□□ 0.65
CLN6-218ENST00000637223 NBNO60934 754 aa19.12■□□□□ 0.65
CLN6-218ENST00000637223 PLA2G4BP0C869 781 aa19.12■□□□□ 0.65
CLN6-218ENST00000637223 GPNMBQ14956 572 aa19.12■□□□□ 0.65
CLN6-218ENST00000637223 CELF4Q9BZC1 486 aaKnown RBP19.12■□□□□ 0.65
CLN6-218ENST00000637223 CDHR5Q9HBB8 845 aa19.12■□□□□ 0.65
CLN6-218ENST00000637223 IL23AQ9NPF7 189 aa19.12■□□□□ 0.65
CLN6-218ENST00000637223 GPRC5CQ9NQ84 441 aa19.12■□□□□ 0.65
CLN6-218ENST00000637223 TRIP12Q14669 1992 aaPredicted RBP19.12■□□□□ 0.65
CLN6-218ENST00000637223 WDR81Q562E7 1941 aa19.12■□□□□ 0.65
CLN6-218ENST00000637223 LTBP2Q14767 1821 aa19.11■□□□□ 0.65
CLN6-218ENST00000637223 A0A087X0B3 334 aa19.11■□□□□ 0.65
CLN6-218ENST00000637223 GAS2O43903 313 aaKnown RBP19.11■□□□□ 0.65
CLN6-218ENST00000637223 GHRP10912 638 aa19.11■□□□□ 0.65
CLN6-218ENST00000637223 COL9A1P20849 921 aa19.11■□□□□ 0.65
CLN6-218ENST00000637223 RFC2P35250 354 aa19.11■□□□□ 0.65
CLN6-218ENST00000637223 NLRP11P59045 1033 aaKnown RBP19.11■□□□□ 0.65
CLN6-218ENST00000637223 DHX8Q14562 1220 aaKnown RBP19.11■□□□□ 0.65
CLN6-218ENST00000637223 FAM102BQ5T8I3 360 aa19.11■□□□□ 0.65
CLN6-218ENST00000637223 RRAGBQ5VZM2 374 aa19.11■□□□□ 0.65
CLN6-218ENST00000637223 RHPN2Q8IUC4 686 aa19.11■□□□□ 0.65
CLN6-218ENST00000637223 KSR1Q8IVT5 923 aa19.11■□□□□ 0.65
CLN6-218ENST00000637223 KCTD17Q8N5Z5 321 aa19.11■□□□□ 0.65
CLN6-218ENST00000637223 PDILTQ8N807 584 aa19.11■□□□□ 0.65
CLN6-218ENST00000637223 TCP11Q8WWU5 503 aa19.11■□□□□ 0.65
CLN6-218ENST00000637223 PRPF31Q8WWY3 499 aaKnown RBP19.11■□□□□ 0.65
CLN6-218ENST00000637223 MYLIPQ8WY64 445 aa19.11■□□□□ 0.65
CLN6-218ENST00000637223 RAD54LQ92698 747 aa19.11■□□□□ 0.65
CLN6-218ENST00000637223 VWCEQ96DN2 955 aa19.11■□□□□ 0.65
CLN6-218ENST00000637223 SCLT1Q96NL6 688 aa19.11■□□□□ 0.65
CLN6-218ENST00000637223 OSMRQ99650 979 aa19.11■□□□□ 0.65
CLN6-218ENST00000637223 RUSC1Q9BVN2 902 aa19.11■□□□□ 0.65
CLN6-218ENST00000637223 BLOC1S4Q9NUP1 217 aa19.11■□□□□ 0.65
CLN6-218ENST00000637223 GPR32O75388 356 aa19.1■□□□□ 0.65
CLN6-218ENST00000637223 PARNO95453 639 aaKnown RBP19.1■□□□□ 0.65
CLN6-218ENST00000637223 CYP11B2P19099 503 aa19.1■□□□□ 0.65
CLN6-218ENST00000637223 GPC3P51654 580 aa19.1■□□□□ 0.65
CLN6-218ENST00000637223 SLC12A3P55017 1021 aa19.1■□□□□ 0.65
CLN6-218ENST00000637223 MCM6Q14566 821 aa19.1■□□□□ 0.65
CLN6-218ENST00000637223 RESP18Q5W5W9 173 aa19.1■□□□□ 0.65
CLN6-218ENST00000637223 C16orf59Q7L2K0 433 aa19.1■□□□□ 0.65
CLN6-218ENST00000637223 SYT2Q8N9I0 419 aaPredicted RBP19.1■□□□□ 0.65
CLN6-218ENST00000637223 MCPH1Q8NEM0 835 aa19.1■□□□□ 0.65
CLN6-218ENST00000637223 NLRP7Q8WX94 980 aa19.1■□□□□ 0.65
CLN6-218ENST00000637223 PSPC1Q8WXF1 523 aaKnown RBP19.1■□□□□ 0.65
CLN6-218ENST00000637223 NLRP4Q96MN2 994 aa19.1■□□□□ 0.65
CLN6-218ENST00000637223 POLR3FQ9H1D9 316 aaPredicted RBP19.1■□□□□ 0.65
CLN6-218ENST00000637223 ADAMTS10Q9H324 1103 aa19.1■□□□□ 0.65
CLN6-218ENST00000637223 POLD4Q9HCU8 107 aa19.1■□□□□ 0.65
CLN6-218ENST00000637223 FAM13BQ9NYF5 915 aa19.1■□□□□ 0.65
CLN6-218ENST00000637223 COL4A3BPQ9Y5P4 624 aa19.1■□□□□ 0.65
CLN6-218ENST00000637223 STAT6P42226 847 aa19.09■□□□□ 0.65
CLN6-218ENST00000637223 LAMTOR4Q0VGL1 99 aa19.09■□□□□ 0.65
CLN6-218ENST00000637223 LPIN1Q14693 890 aa19.09■□□□□ 0.65
CLN6-218ENST00000637223 SHHQ15465 462 aa19.09■□□□□ 0.65
CLN6-218ENST00000637223 NAALADL2Q58DX5 795 aa19.09■□□□□ 0.65
CLN6-218ENST00000637223 FBXO47Q5MNV8 452 aa19.09■□□□□ 0.65
CLN6-218ENST00000637223 ADALQ6DHV7 355 aa19.09■□□□□ 0.65
CLN6-218ENST00000637223 RINT1Q6NUQ1 792 aa19.09■□□□□ 0.65
CLN6-218ENST00000637223 CCDC73Q6ZRK6 1079 aa19.09■□□□□ 0.65
CLN6-218ENST00000637223 RPUSD2Q8IZ73 545 aaKnown RBP19.09■□□□□ 0.65
CLN6-218ENST00000637223 ASAP3Q8TDY4 903 aa19.09■□□□□ 0.65
CLN6-218ENST00000637223 TMEM40Q8WWA1 233 aa19.09■□□□□ 0.65
CLN6-218ENST00000637223 LARP4BQ92615 738 aaKnown RBP19.09■□□□□ 0.65
CLN6-218ENST00000637223 CXCL10P02778 98 aa19.08■□□□□ 0.64
CLN6-218ENST00000637223 SRGAP2CP0DJJ0 459 aa19.08■□□□□ 0.64
CLN6-218ENST00000637223 ARL2P36404 184 aa19.08■□□□□ 0.64
CLN6-218ENST00000637223 CRYBB1P53674 252 aaPredicted RBP19.08■□□□□ 0.64
CLN6-218ENST00000637223 RAD51AP2Q09MP3 1159 aa19.08■□□□□ 0.64
CLN6-218ENST00000637223 C1orf186Q6ZWK4 172 aa19.08■□□□□ 0.64
CLN6-218ENST00000637223 ZNF365Q70YC5 407 aa19.08■□□□□ 0.64
CLN6-218ENST00000637223 GPBP1Q86WP2 473 aa19.08■□□□□ 0.64
CLN6-218ENST00000637223 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.08■□□□□ 0.64
CLN6-218ENST00000637223 STK17AQ9UEE5 414 aa19.08■□□□□ 0.64
CLN6-218ENST00000637223 KAT6AQ92794 2004 aa19.07■□□□□ 0.64
CLN6-218ENST00000637223 A0A087WZ62 844 aa19.07■□□□□ 0.64
CLN6-218ENST00000637223 NPHP3-ACAD11A0A0J9YXS1 232 aa19.07■□□□□ 0.64
CLN6-218ENST00000637223 A0A1B0GVL5 298 aa19.07■□□□□ 0.64
CLN6-218ENST00000637223 PFKMP08237 780 aa19.07■□□□□ 0.64
CLN6-218ENST00000637223 GLRA2P23416 452 aa19.07■□□□□ 0.64
CLN6-218ENST00000637223 CMA1P23946 247 aa19.07■□□□□ 0.64
CLN6-218ENST00000637223 CD52P31358 61 aa19.07■□□□□ 0.64
CLN6-218ENST00000637223 TCTN1Q2MV58 587 aa19.07■□□□□ 0.64
CLN6-218ENST00000637223 TMEM240Q5SV17 173 aa19.07■□□□□ 0.64
CLN6-218ENST00000637223 C9orf50Q5SZB4 431 aa19.07■□□□□ 0.64
CLN6-218ENST00000637223 PSRC1Q6PGN9 363 aaPredicted RBP19.07■□□□□ 0.64
CLN6-218ENST00000637223 TSHZ1Q6ZSZ6 1077 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms