RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 C1QTNF1Q9BXJ1 281 aa20.12■□□□□ 0.81
PNKP-225ENST00000636214 NIFKQ9BYG3 293 aaKnown RBP20.12■□□□□ 0.81
PNKP-225ENST00000636214 IGFLR1Q9H665 355 aa20.12■□□□□ 0.81
PNKP-225ENST00000636214 ELAC1Q9H777 363 aaKnown RBP20.12■□□□□ 0.81
PNKP-225ENST00000636214 FNDC1Q4ZHG4 1894 aaPredicted RBP20.11■□□□□ 0.81
PNKP-225ENST00000636214 TBX3O15119 743 aa20.11■□□□□ 0.81
PNKP-225ENST00000636214 ITGB1P05556 798 aa20.11■□□□□ 0.81
PNKP-225ENST00000636214 DARSP14868 501 aaKnown RBP20.11■□□□□ 0.81
PNKP-225ENST00000636214 SFPQP23246 707 aaKnown RBP eCLIP20.11■□□□□ 0.81
PNKP-225ENST00000636214 EXOC8Q8IYI6 725 aa20.11■□□□□ 0.81
PNKP-225ENST00000636214 THNSL1Q8IYQ7 743 aa20.11■□□□□ 0.81
PNKP-225ENST00000636214 RNF169Q8NCN4 708 aa20.11■□□□□ 0.81
PNKP-225ENST00000636214 NEK9Q8TD19 979 aa20.11■□□□□ 0.81
PNKP-225ENST00000636214 POF1BQ8WVV4 589 aa20.11■□□□□ 0.81
PNKP-225ENST00000636214 GTF3C6Q969F1 213 aa20.11■□□□□ 0.81
PNKP-225ENST00000636214 INO80BQ9C086 356 aaPredicted RBP20.11■□□□□ 0.81
PNKP-225ENST00000636214 DACT1Q9NYF0 836 aa20.11■□□□□ 0.81
PNKP-225ENST00000636214 LAG3P18627 525 aa20.1■□□□□ 0.81
PNKP-225ENST00000636214 QARSP47897 775 aaKnown RBP20.1■□□□□ 0.81
PNKP-225ENST00000636214 PPP2R5CQ13362 524 aa20.1■□□□□ 0.81
PNKP-225ENST00000636214 TARBP2Q15633 366 aaKnown RBP20.1■□□□□ 0.81
PNKP-225ENST00000636214 FAM102BQ5T8I3 360 aa20.1■□□□□ 0.81
PNKP-225ENST00000636214 B3GNT9Q6UX72 402 aa20.1■□□□□ 0.81
PNKP-225ENST00000636214 SLFN12Q8IYM2 578 aa20.1■□□□□ 0.81
PNKP-225ENST00000636214 NECAB1Q8N987 351 aa20.1■□□□□ 0.81
PNKP-225ENST00000636214 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.1■□□□□ 0.81
PNKP-225ENST00000636214 SPPL3Q8TCT6 385 aa20.1■□□□□ 0.81
PNKP-225ENST00000636214 OXER1Q8TDS5 423 aa20.1■□□□□ 0.81
PNKP-225ENST00000636214 MICAL1Q8TDZ2 1067 aa20.1■□□□□ 0.81
PNKP-225ENST00000636214 TMEM117Q9H0C3 514 aa20.1■□□□□ 0.81
PNKP-225ENST00000636214 CTDNEP1O95476 244 aa20.09■□□□□ 0.81
PNKP-225ENST00000636214 P4HBP07237 508 aaKnown RBP20.09■□□□□ 0.81
PNKP-225ENST00000636214 FGFR1P11362 822 aa20.09■□□□□ 0.81
PNKP-225ENST00000636214 IL9P15248 144 aa20.09■□□□□ 0.81
PNKP-225ENST00000636214 DSC3Q14574 896 aa20.09■□□□□ 0.81
PNKP-225ENST00000636214 ME3Q16798 604 aa20.09■□□□□ 0.81
PNKP-225ENST00000636214 NCAPH2Q6IBW4 605 aa20.09■□□□□ 0.81
PNKP-225ENST00000636214 SLC7A3Q8WY07 619 aa20.09■□□□□ 0.81
PNKP-225ENST00000636214 SH2D3AQ9BRG2 576 aa20.09■□□□□ 0.81
PNKP-225ENST00000636214 KCNMB3Q9NPA1 279 aa20.09■□□□□ 0.81
PNKP-225ENST00000636214 GJB4Q9NTQ9 266 aa20.09■□□□□ 0.81
PNKP-225ENST00000636214 TYW1Q9NV66 732 aaKnown RBP20.09■□□□□ 0.81
PNKP-225ENST00000636214 SUCLA2Q9P2R7 463 aaPredicted RBP20.09■□□□□ 0.81
PNKP-225ENST00000636214 PPME1Q9Y570 386 aa20.09■□□□□ 0.81
PNKP-225ENST00000636214 ATG2AQ2TAZ0 1938 aa20.09■□□□□ 0.81
PNKP-225ENST00000636214 TMEM150BA6NC51 233 aa20.08■□□□□ 0.81
PNKP-225ENST00000636214 GRXCR2A6NFK2 248 aa20.08■□□□□ 0.81
PNKP-225ENST00000636214 NDUFV1P49821 464 aa20.08■□□□□ 0.81
PNKP-225ENST00000636214 POLGP54098 1239 aaPredicted RBP20.08■□□□□ 0.81
PNKP-225ENST00000636214 FAM189BP81408 668 aa20.08■□□□□ 0.81
PNKP-225ENST00000636214 UBE3AQ05086 875 aa20.08■□□□□ 0.81
PNKP-225ENST00000636214 HYAL1Q12794 435 aa20.08■□□□□ 0.81
PNKP-225ENST00000636214 PLA2G4FQ68DD2 849 aa20.08■□□□□ 0.81
PNKP-225ENST00000636214 ZNF410Q86VK4 478 aa20.08■□□□□ 0.81
PNKP-225ENST00000636214 RHPN2Q8IUC4 686 aa20.08■□□□□ 0.81
PNKP-225ENST00000636214 LRRC43Q8N309 656 aa20.08■□□□□ 0.81
PNKP-225ENST00000636214 CEP170P1Q96L14 293 aa20.08■□□□□ 0.81
PNKP-225ENST00000636214 VAV3Q9UKW4 847 aa20.08■□□□□ 0.81
PNKP-225ENST00000636214 EML1O00423 815 aa20.07■□□□□ 0.8
PNKP-225ENST00000636214 DTNBO60941 627 aa20.07■□□□□ 0.8
PNKP-225ENST00000636214 MAFO75444 373 aaPredicted RBP20.07■□□□□ 0.8
PNKP-225ENST00000636214 FGFR4P22455 802 aa20.07■□□□□ 0.8
PNKP-225ENST00000636214 FOSBP53539 338 aa20.07■□□□□ 0.8
PNKP-225ENST00000636214 NR5A1Q13285 461 aa20.07■□□□□ 0.8
PNKP-225ENST00000636214 COL19A1Q14993 1142 aa20.07■□□□□ 0.8
PNKP-225ENST00000636214 OTUD6AQ7L8S5 288 aa20.07■□□□□ 0.8
PNKP-225ENST00000636214 ECHDC2Q86YB7 292 aa20.07■□□□□ 0.8
PNKP-225ENST00000636214 POTEDQ86YR6 584 aa20.07■□□□□ 0.8
PNKP-225ENST00000636214 FAM178BQ8IXR5 827 aa20.07■□□□□ 0.8
PNKP-225ENST00000636214 GJD3Q8N144 294 aa20.07■□□□□ 0.8
PNKP-225ENST00000636214 COLGALT1Q8NBJ5 622 aa20.07■□□□□ 0.8
PNKP-225ENST00000636214 NLRP4Q96MN2 994 aa20.07■□□□□ 0.8
PNKP-225ENST00000636214 CCDC43Q96MW1 224 aaKnown RBP20.07■□□□□ 0.8
PNKP-225ENST00000636214 LXNQ9BS40 222 aa20.07■□□□□ 0.8
PNKP-225ENST00000636214 CYP26B1Q9NR63 512 aa20.07■□□□□ 0.8
PNKP-225ENST00000636214 TLR9Q9NR96 1032 aa20.07■□□□□ 0.8
PNKP-225ENST00000636214 PUF60Q9UHX1 559 aaKnown RBP20.07■□□□□ 0.8
PNKP-225ENST00000636214 A0A087WZ62 844 aa20.06■□□□□ 0.8
PNKP-225ENST00000636214 IGKV6-21A0A0C4DH24 114 aa20.06■□□□□ 0.8
PNKP-225ENST00000636214 FSD2A1L4K1 749 aa20.06■□□□□ 0.8
PNKP-225ENST00000636214 FGF18O76093 207 aa20.06■□□□□ 0.8
PNKP-225ENST00000636214 LARGE1O95461 756 aa20.06■□□□□ 0.8
PNKP-225ENST00000636214 EOMESO95936 686 aa20.06■□□□□ 0.8
PNKP-225ENST00000636214 SKIP12755 728 aa20.06■□□□□ 0.8
PNKP-225ENST00000636214 PPM1AP35813 382 aa20.06■□□□□ 0.8
PNKP-225ENST00000636214 RFC5P40937 340 aa20.06■□□□□ 0.8
PNKP-225ENST00000636214 DRP2Q13474 957 aa20.06■□□□□ 0.8
PNKP-225ENST00000636214 EPHA7Q15375 998 aa20.06■□□□□ 0.8
PNKP-225ENST00000636214 SAFBQ15424 915 aaKnown RBP eCLIP20.06■□□□□ 0.8
PNKP-225ENST00000636214 CLUL1Q15846 466 aa20.06■□□□□ 0.8
PNKP-225ENST00000636214 TWF2Q6IBS0 349 aaKnown RBP20.06■□□□□ 0.8
PNKP-225ENST00000636214 ANO5Q75V66 913 aa20.06■□□□□ 0.8
PNKP-225ENST00000636214 CATSPER4Q7RTX7 472 aa20.06■□□□□ 0.8
PNKP-225ENST00000636214 NSUN7Q8NE18 718 aaKnown RBP20.06■□□□□ 0.8
PNKP-225ENST00000636214 FDXACB1Q9BRP7 624 aaPredicted RBP20.06■□□□□ 0.8
PNKP-225ENST00000636214 MRPL9Q9BYD2 267 aaKnown RBP20.06■□□□□ 0.8
PNKP-225ENST00000636214 CHST12Q9NRB3 414 aa20.06■□□□□ 0.8
PNKP-225ENST00000636214 A0A0U1RQF3 1178 aa20.05■□□□□ 0.8
PNKP-225ENST00000636214 CSDE1O75534 798 aaKnown RBP20.05■□□□□ 0.8
PNKP-225ENST00000636214 COL9A1P20849 921 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms