RNA–Protein interactions for RNA: ENST00000635747.1

CLN6-210, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,181 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-210ENST00000635747 SLC7A3Q8WY07 619 aa20.47■□□□□ 0.87
CLN6-210ENST00000635747 GCOM2Q9BZD3 368 aaPredicted RBP20.47■□□□□ 0.87
CLN6-210ENST00000635747 INO80BQ9C086 356 aaPredicted RBP20.47■□□□□ 0.87
CLN6-210ENST00000635747 LMAN2LQ9H0V9 348 aa20.47■□□□□ 0.87
CLN6-210ENST00000635747 ELAC1Q9H777 363 aaKnown RBP20.47■□□□□ 0.87
CLN6-210ENST00000635747 ZSWIM4Q9H7M6 989 aa20.47■□□□□ 0.87
CLN6-210ENST00000635747 CYP26B1Q9NR63 512 aa20.47■□□□□ 0.87
CLN6-210ENST00000635747 C9IYK1 514 aa20.46■□□□□ 0.87
CLN6-210ENST00000635747 DARSP14868 501 aaKnown RBP20.46■□□□□ 0.87
CLN6-210ENST00000635747 FAM189BP81408 668 aa20.46■□□□□ 0.87
CLN6-210ENST00000635747 SPIRE1Q08AE8 756 aa20.46■□□□□ 0.87
CLN6-210ENST00000635747 TIGD5Q53EQ6 642 aa20.46■□□□□ 0.87
CLN6-210ENST00000635747 ZNF410Q86VK4 478 aa20.46■□□□□ 0.87
CLN6-210ENST00000635747 NEK9Q8TD19 979 aa20.46■□□□□ 0.87
CLN6-210ENST00000635747 CEP170P1Q96L14 293 aa20.46■□□□□ 0.87
CLN6-210ENST00000635747 LXNQ9BS40 222 aa20.46■□□□□ 0.87
CLN6-210ENST00000635747 FOXP1Q9H334 677 aaPredicted RBP20.46■□□□□ 0.87
CLN6-210ENST00000635747 TMEM150BA6NC51 233 aa20.45■□□□□ 0.86
CLN6-210ENST00000635747 GAS2O43903 313 aaKnown RBP20.45■□□□□ 0.86
CLN6-210ENST00000635747 RFC5P40937 340 aa20.45■□□□□ 0.86
CLN6-210ENST00000635747 ORC2Q13416 577 aaPredicted RBP20.45■□□□□ 0.86
CLN6-210ENST00000635747 DSC3Q14574 896 aa20.45■□□□□ 0.86
CLN6-210ENST00000635747 FBXO18Q8NFZ0 1043 aa20.45■□□□□ 0.86
CLN6-210ENST00000635747 P2RX5Q93086 422 aa20.45■□□□□ 0.86
CLN6-210ENST00000635747 TTC12Q9H892 705 aaPredicted RBP20.45■□□□□ 0.86
CLN6-210ENST00000635747 ATP6V0A4Q9HBG4 840 aa20.45■□□□□ 0.86
CLN6-210ENST00000635747 TMEM161AQ9NX61 479 aa20.45■□□□□ 0.86
CLN6-210ENST00000635747 SUCLA2Q9P2R7 463 aaPredicted RBP20.45■□□□□ 0.86
CLN6-210ENST00000635747 KIF3AQ9Y496 699 aa20.45■□□□□ 0.86
CLN6-210ENST00000635747 WDR81Q562E7 1941 aa20.45■□□□□ 0.86
CLN6-210ENST00000635747 HOXA2O43364 376 aa20.44■□□□□ 0.86
CLN6-210ENST00000635747 LINC00271P0C7V0 271 aa20.44■□□□□ 0.86
CLN6-210ENST00000635747 YWHABP31946 246 aaKnown RBP20.44■□□□□ 0.86
CLN6-210ENST00000635747 POLGP54098 1239 aaPredicted RBP20.44■□□□□ 0.86
CLN6-210ENST00000635747 GUCY1B3Q02153 619 aa20.44■□□□□ 0.86
CLN6-210ENST00000635747 GNL2Q13823 731 aaKnown RBP20.44■□□□□ 0.86
CLN6-210ENST00000635747 DYDC2Q96IM9 177 aa20.44■□□□□ 0.86
CLN6-210ENST00000635747 MTMR9Q96QG7 549 aa20.44■□□□□ 0.86
CLN6-210ENST00000635747 SH2D3AQ9BRG2 576 aa20.44■□□□□ 0.86
CLN6-210ENST00000635747 DACT1Q9NYF0 836 aa20.44■□□□□ 0.86
CLN6-210ENST00000635747 RGL1Q9NZL6 768 aa20.44■□□□□ 0.86
CLN6-210ENST00000635747 LOXHD1Q8IVV2 1947 aa20.43■□□□□ 0.86
CLN6-210ENST00000635747 SFPQP23246 707 aaKnown RBP eCLIP20.43■□□□□ 0.86
CLN6-210ENST00000635747 TXKP42681 527 aa20.43■□□□□ 0.86
CLN6-210ENST00000635747 NPEPPSP55786 919 aa20.43■□□□□ 0.86
CLN6-210ENST00000635747 DRP2Q13474 957 aa20.43■□□□□ 0.86
CLN6-210ENST00000635747 PAN2Q504Q3 1202 aaKnown RBP20.43■□□□□ 0.86
CLN6-210ENST00000635747 PLA2G4FQ68DD2 849 aa20.43■□□□□ 0.86
CLN6-210ENST00000635747 RHPN2Q8IUC4 686 aa20.43■□□□□ 0.86
CLN6-210ENST00000635747 TPH2Q8IWU9 490 aa20.43■□□□□ 0.86
CLN6-210ENST00000635747 TCP11Q8WWU5 503 aa20.43■□□□□ 0.86
CLN6-210ENST00000635747 EIF2AK1Q9BQI3 630 aaKnown RBP20.43■□□□□ 0.86
CLN6-210ENST00000635747 DHX33Q9H6R0 707 aaKnown RBP20.43■□□□□ 0.86
CLN6-210ENST00000635747 CHST12Q9NRB3 414 aa20.43■□□□□ 0.86
CLN6-210ENST00000635747 AAASQ9NRG9 546 aa20.43■□□□□ 0.86
CLN6-210ENST00000635747 MRPL42Q9Y6G3 142 aaKnown RBP20.43■□□□□ 0.86
CLN6-210ENST00000635747 COL4A4P53420 1690 aaPredicted RBP20.42■□□□□ 0.86
CLN6-210ENST00000635747 ASAP2O43150 1006 aa20.42■□□□□ 0.86
CLN6-210ENST00000635747 NCK2O43639 380 aa20.42■□□□□ 0.86
CLN6-210ENST00000635747 SLITRK3O94933 977 aa20.42■□□□□ 0.86
CLN6-210ENST00000635747 LYPLA2O95372 231 aa20.42■□□□□ 0.86
CLN6-210ENST00000635747 IBSPP21815 317 aaPredicted RBP20.42■□□□□ 0.86
CLN6-210ENST00000635747 CTTNQ14247 550 aaKnown RBP20.42■□□□□ 0.86
CLN6-210ENST00000635747 PSPC1Q8WXF1 523 aaKnown RBP20.42■□□□□ 0.86
CLN6-210ENST00000635747 ZNF668Q96K58 619 aaPredicted RBP20.42■□□□□ 0.86
CLN6-210ENST00000635747 HSD17B14Q9BPX1 270 aa20.42■□□□□ 0.86
CLN6-210ENST00000635747 NSUN3Q9H649 340 aaKnown RBP20.42■□□□□ 0.86
CLN6-210ENST00000635747 WRAP73Q9P2S5 460 aaPredicted RBP20.42■□□□□ 0.86
CLN6-210ENST00000635747 RALGAPA2Q2PPJ7 1873 aa20.41■□□□□ 0.86
CLN6-210ENST00000635747 A0A087WZ62 844 aa20.41■□□□□ 0.86
CLN6-210ENST00000635747 TBKBP1A7MCY6 615 aa20.41■□□□□ 0.86
CLN6-210ENST00000635747 EOMESO95936 686 aa20.41■□□□□ 0.86
CLN6-210ENST00000635747 ATP2B1P20020 1258 aa20.41■□□□□ 0.86
CLN6-210ENST00000635747 MCM7P33993 719 aa20.41■□□□□ 0.86
CLN6-210ENST00000635747 TRAPPC10P48553 1259 aa20.41■□□□□ 0.86
CLN6-210ENST00000635747 CYP4A11Q02928 519 aa20.41■□□□□ 0.86
CLN6-210ENST00000635747 TFF2Q03403 129 aa20.41■□□□□ 0.86
CLN6-210ENST00000635747 XKR9Q5GH70 373 aa20.41■□□□□ 0.86
CLN6-210ENST00000635747 NOSTRINQ8IVI9 506 aa20.41■□□□□ 0.86
CLN6-210ENST00000635747 FDXACB1Q9BRP7 624 aaPredicted RBP20.41■□□□□ 0.86
CLN6-210ENST00000635747 ANKEF1Q9NU02 776 aa20.41■□□□□ 0.86
CLN6-210ENST00000635747 PCDHB12Q9Y5F1 795 aa20.41■□□□□ 0.86
CLN6-210ENST00000635747 COL4A3BPQ9Y5P4 624 aa20.41■□□□□ 0.86
CLN6-210ENST00000635747 GTF3C3Q9Y5Q9 886 aa20.41■□□□□ 0.86
CLN6-210ENST00000635747 SPTBN5Q9NRC6 3674 aaKnown RBP20.41■□□□□ 0.86
CLN6-210ENST00000635747 A0A0U1RQF3 1178 aa20.4■□□□□ 0.86
CLN6-210ENST00000635747 SKIP12755 728 aa20.4■□□□□ 0.86
CLN6-210ENST00000635747 XRCC6P12956 609 aaKnown RBP eCLIP20.4■□□□□ 0.86
CLN6-210ENST00000635747 BMP1P13497 986 aa20.4■□□□□ 0.86
CLN6-210ENST00000635747 MCM2P49736 904 aa20.4■□□□□ 0.86
CLN6-210ENST00000635747 CSPP1Q1MSJ5 1256 aa20.4■□□□□ 0.86
CLN6-210ENST00000635747 SPOUT1Q5T280 376 aaKnown RBP20.4■□□□□ 0.86
CLN6-210ENST00000635747 FAM102BQ5T8I3 360 aa20.4■□□□□ 0.86
CLN6-210ENST00000635747 ECHDC2Q86YB7 292 aa20.4■□□□□ 0.86
CLN6-210ENST00000635747 ABI1Q8IZP0 508 aa20.4■□□□□ 0.86
CLN6-210ENST00000635747 RSPH1Q8WYR4 309 aa20.4■□□□□ 0.86
CLN6-210ENST00000635747 TMEM117Q9H0C3 514 aa20.4■□□□□ 0.86
CLN6-210ENST00000635747 NOL7Q9UMY1 257 aaKnown RBP20.4■□□□□ 0.86
CLN6-210ENST00000635747 PLAGL2Q9UPG8 496 aa20.4■□□□□ 0.86
CLN6-210ENST00000635747 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms