RNA–Protein interactions for RNA: ENST00000633899.1

SF1-221, Transcript of splicing factor 1, humanhuman

TSL 4

Gene SF1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-221ENST00000633899 ADAMTS10Q9H324 1103 aa23.28■■□□□ 1.32
SF1-221ENST00000633899 PRDM12Q9H4Q4 367 aa23.28■■□□□ 1.32
SF1-221ENST00000633899 DHX33Q9H6R0 707 aaKnown RBP23.28■■□□□ 1.32
SF1-221ENST00000633899 STK24Q9Y6E0 443 aa23.28■■□□□ 1.32
SF1-221ENST00000633899 LCHNA4D1U4 455 aa23.27■■□□□ 1.32
SF1-221ENST00000633899 ZBTB39O15060 712 aa23.27■■□□□ 1.32
SF1-221ENST00000633899 TAP1Q03518 808 aa23.27■■□□□ 1.32
SF1-221ENST00000633899 DTHD1Q6ZMT9 781 aa23.27■■□□□ 1.32
SF1-221ENST00000633899 ZNF410Q86VK4 478 aa23.27■■□□□ 1.32
SF1-221ENST00000633899 CATSPER3Q86XQ3 398 aa23.27■■□□□ 1.32
SF1-221ENST00000633899 PIGOQ8TEQ8 1089 aa23.27■■□□□ 1.32
SF1-221ENST00000633899 PSPC1Q8WXF1 523 aaKnown RBP23.27■■□□□ 1.32
SF1-221ENST00000633899 NLRP4Q96MN2 994 aa23.27■■□□□ 1.32
SF1-221ENST00000633899 TSPYL2Q9H2G4 693 aaPredicted RBP23.27■■□□□ 1.32
SF1-221ENST00000633899 CERS4Q9HA82 394 aa23.27■■□□□ 1.32
SF1-221ENST00000633899 MED24O75448 989 aa23.26■■□□□ 1.31
SF1-221ENST00000633899 XRCC6P12956 609 aaKnown RBP eCLIP23.26■■□□□ 1.311e-7■■■□□ 17.8
SF1-221ENST00000633899 RPA1P27694 616 aa23.26■■□□□ 1.31
SF1-221ENST00000633899 CCT6AP40227 531 aaKnown RBP23.26■■□□□ 1.31
SF1-221ENST00000633899 PRPHP41219 470 aa23.26■■□□□ 1.31
SF1-221ENST00000633899 HTRA4P83105 476 aaPredicted RBP23.26■■□□□ 1.31
SF1-221ENST00000633899 FERMT3Q86UX7 667 aa23.26■■□□□ 1.31
SF1-221ENST00000633899 LINC01599Q8WXQ3 324 aa23.26■■□□□ 1.31
SF1-221ENST00000633899 ARNTL2Q8WYA1 636 aa23.26■■□□□ 1.31
SF1-221ENST00000633899 TMEM143Q96AN5 459 aa23.26■■□□□ 1.31
SF1-221ENST00000633899 NACC1Q96RE7 527 aa23.26■■□□□ 1.31
SF1-221ENST00000633899 INO80BQ9C086 356 aaPredicted RBP23.26■■□□□ 1.31
SF1-221ENST00000633899 TMX1Q9H3N1 280 aa23.26■■□□□ 1.31
SF1-221ENST00000633899 ATP6V0A4Q9HBG4 840 aa23.26■■□□□ 1.31
SF1-221ENST00000633899 RNF216Q9NWF9 866 aaPredicted RBP23.26■■□□□ 1.31
SF1-221ENST00000633899 LRFN2Q9ULH4 789 aa23.26■■□□□ 1.31
SF1-221ENST00000633899 COL4A3BPQ9Y5P4 624 aa23.26■■□□□ 1.31
SF1-221ENST00000633899 A0A087WZ62 844 aa23.25■■□□□ 1.31
SF1-221ENST00000633899 DGAT1O75907 488 aa23.25■■□□□ 1.31
SF1-221ENST00000633899 STAG3L1P0CL83 205 aa23.25■■□□□ 1.31
SF1-221ENST00000633899 SPATA31C1P0DKV0 1188 aa23.25■■□□□ 1.31
SF1-221ENST00000633899 DARSP14868 501 aaKnown RBP23.25■■□□□ 1.31
SF1-221ENST00000633899 ZSCAN20P17040 1043 aaPredicted RBP23.25■■□□□ 1.31
SF1-221ENST00000633899 RARRES1P49788 294 aa23.25■■□□□ 1.31
SF1-221ENST00000633899 PDIA5Q14554 519 aa23.25■■□□□ 1.31
SF1-221ENST00000633899 POTEGQ6S5H5 508 aa23.25■■□□□ 1.31
SF1-221ENST00000633899 ADAM2Q99965 735 aa23.25■■□□□ 1.31
SF1-221ENST00000633899 FDXACB1Q9BRP7 624 aaPredicted RBP23.25■■□□□ 1.31
SF1-221ENST00000633899 C1orf112Q9NSG2 853 aa23.25■■□□□ 1.31
SF1-221ENST00000633899 NLRC5Q86WI3 1866 aa23.25■■□□□ 1.31
SF1-221ENST00000633899 SYT1P21579 422 aa23.24■■□□□ 1.31
SF1-221ENST00000633899 MUTP22033 750 aa23.24■■□□□ 1.31
SF1-221ENST00000633899 SFPQP23246 707 aaKnown RBP eCLIP23.24■■□□□ 1.31
SF1-221ENST00000633899 ATP2C1P98194 919 aaPredicted RBP23.24■■□□□ 1.31
SF1-221ENST00000633899 KRT79Q5XKE5 535 aa23.24■■□□□ 1.31
SF1-221ENST00000633899 RTN4RL1Q86UN2 441 aaPredicted RBP23.24■■□□□ 1.31
SF1-221ENST00000633899 NPAS4Q8IUM7 802 aa23.24■■□□□ 1.31
SF1-221ENST00000633899 SNX29Q8TEQ0 813 aa23.24■■□□□ 1.31
SF1-221ENST00000633899 A0A087WWV3 80 aa23.23■■□□□ 1.31
SF1-221ENST00000633899 LINC01553A4QN01 128 aa23.23■■□□□ 1.31
SF1-221ENST00000633899 ARHGEF15O94989 841 aa23.23■■□□□ 1.31
SF1-221ENST00000633899 SARSP49591 514 aaKnown RBP23.23■■□□□ 1.31
SF1-221ENST00000633899 KSR1Q8IVT5 923 aa23.23■■□□□ 1.31
SF1-221ENST00000633899 IGSF22Q8N9C0 903 aa23.23■■□□□ 1.31
SF1-221ENST00000633899 PRPF31Q8WWY3 499 aaKnown RBP23.23■■□□□ 1.31
SF1-221ENST00000633899 TGS1Q96RS0 853 aaKnown RBP23.23■■□□□ 1.31
SF1-221ENST00000633899 RGS18Q9NS28 235 aa23.23■■□□□ 1.31
SF1-221ENST00000633899 DBR1Q9UK59 544 aaKnown RBP23.23■■□□□ 1.31
SF1-221ENST00000633899 MTUS1Q9ULD2 1270 aa23.23■■□□□ 1.31
SF1-221ENST00000633899 PCDHB7Q9Y5E2 793 aa23.23■■□□□ 1.31
SF1-221ENST00000633899 RALGAPA2Q2PPJ7 1873 aa23.22■■□□□ 1.31
SF1-221ENST00000633899 ASAP2O43150 1006 aa23.22■■□□□ 1.31
SF1-221ENST00000633899 MGEA5O60502 916 aa23.22■■□□□ 1.31
SF1-221ENST00000633899 USO1O60763 962 aaKnown RBP23.22■■□□□ 1.31
SF1-221ENST00000633899 BMP15O95972 392 aa23.22■■□□□ 1.31
SF1-221ENST00000633899 SRGAP2CP0DJJ0 459 aa23.22■■□□□ 1.31
SF1-221ENST00000633899 IGFBP4P22692 258 aa23.22■■□□□ 1.31
SF1-221ENST00000633899 SLC24A5Q71RS6 500 aa23.22■■□□□ 1.31
SF1-221ENST00000633899 SP7Q8TDD2 431 aaPredicted RBP23.22■■□□□ 1.31
SF1-221ENST00000633899 CHD9Q3L8U1 2897 aa23.21■■□□□ 1.31
SF1-221ENST00000633899 ARHGEF35A5YM69 484 aa23.21■■□□□ 1.31
SF1-221ENST00000633899 FGFR4P22455 802 aa23.21■■□□□ 1.31
SF1-221ENST00000633899 LAMTOR4Q0VGL1 99 aa23.21■■□□□ 1.31
SF1-221ENST00000633899 TFDP1Q14186 410 aa23.21■■□□□ 1.31
SF1-221ENST00000633899 MXD4Q14582 209 aaPredicted RBP23.21■■□□□ 1.31
SF1-221ENST00000633899 ARL6IP4Q66PJ3 421 aaKnown RBP23.21■■□□□ 1.31
SF1-221ENST00000633899 FIBCD1Q8N539 461 aa23.21■■□□□ 1.31
SF1-221ENST00000633899 KIAA1024Q9UPX6 916 aa23.21■■□□□ 1.31
SF1-221ENST00000633899 ADGRA3Q8IWK6 1321 aa23.21■■□□□ 1.31
SF1-221ENST00000633899 COL4A4P53420 1690 aaPredicted RBP23.21■■□□□ 1.31
SF1-221ENST00000633899 COL4A6Q14031 1691 aa23.21■■□□□ 1.31
SF1-221ENST00000633899 VWA3AA6NCI4 1184 aa23.2■■□□□ 1.3
SF1-221ENST00000633899 GTPBP6O43824 516 aaPredicted RBP23.2■■□□□ 1.3
SF1-221ENST00000633899 CSDE1O75534 798 aaKnown RBP23.2■■□□□ 1.3
SF1-221ENST00000633899 BTG3Q14201 252 aaPredicted RBP23.2■■□□□ 1.3
SF1-221ENST00000633899 CATSPER4Q7RTX7 472 aa23.2■■□□□ 1.3
SF1-221ENST00000633899 RNF149Q8NC42 400 aa23.2■■□□□ 1.3
SF1-221ENST00000633899 MCPH1Q8NEM0 835 aa23.2■■□□□ 1.3
SF1-221ENST00000633899 MAFAQ8NHW3 353 aaPredicted RBP23.2■■□□□ 1.3
SF1-221ENST00000633899 SAMD11Q96NU1 681 aa23.2■■□□□ 1.3
SF1-221ENST00000633899 XPNPEP1Q9NQW7 623 aa23.2■■□□□ 1.3
SF1-221ENST00000633899 DDX19AQ9NUU7 478 aaKnown RBP23.2■■□□□ 1.3
SF1-221ENST00000633899 DACT1Q9NYF0 836 aa23.2■■□□□ 1.3
SF1-221ENST00000633899 CDH23Q9H251 3354 aa23.2■■□□□ 1.3
SF1-221ENST00000633899 STX6O43752 255 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms