RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 ASIC4Q96FT7 647 aa12.56□□□□□ -0.4
SHPRH-211ENST00000629427 PLEKHF1Q96S99 279 aa12.56□□□□□ -0.4
SHPRH-211ENST00000629427 TUBB6Q9BUF5 446 aa12.56□□□□□ -0.4
SHPRH-211ENST00000629427 DYRK4Q9NR20 520 aa12.56□□□□□ -0.4
SHPRH-211ENST00000629427 FBXO40Q9UH90 709 aa12.56□□□□□ -0.4
SHPRH-211ENST00000629427 FAM196BA6NMK8 535 aa12.56□□□□□ -0.4
SHPRH-211ENST00000629427 PEX19P40855 299 aa12.56□□□□□ -0.4
SHPRH-211ENST00000629427 ZBED6P86452 979 aa12.56□□□□□ -0.4
SHPRH-211ENST00000629427 SWSAP1Q6NVH7 229 aa12.56□□□□□ -0.4
SHPRH-211ENST00000629427 TOGARAM2Q6ZUX3 1019 aa12.56□□□□□ -0.4
SHPRH-211ENST00000629427 NR1H4Q96RI1 486 aaPredicted RBP12.56□□□□□ -0.4
SHPRH-211ENST00000629427 TRIM4Q9C037 500 aa12.56□□□□□ -0.4
SHPRH-211ENST00000629427 CLASP1Q7Z460 1538 aa12.55□□□□□ -0.4
SHPRH-211ENST00000629427 ATP7BP35670 1465 aa12.55□□□□□ -0.4
SHPRH-211ENST00000629427 USP17L10C9JJH3 530 aa12.55□□□□□ -0.4
SHPRH-211ENST00000629427 IPO5O00410 1097 aaKnown RBP12.55□□□□□ -0.4
SHPRH-211ENST00000629427 YAF2Q8IY57 180 aa12.55□□□□□ -0.4
SHPRH-211ENST00000629427 SAYSD1Q9NPB0 183 aa12.55□□□□□ -0.4
SHPRH-211ENST00000629427 GTSE1Q9NYZ3 720 aa12.55□□□□□ -0.4
SHPRH-211ENST00000629427 AFF4Q9UHB7 1163 aaKnown RBP12.55□□□□□ -0.4
SHPRH-211ENST00000629427 ZNF335Q9H4Z2 1342 aaPredicted RBP12.55□□□□□ -0.4
SHPRH-211ENST00000629427 KITP10721 976 aa12.55□□□□□ -0.4
SHPRH-211ENST00000629427 MCAMP43121 646 aa12.55□□□□□ -0.4
SHPRH-211ENST00000629427 ULK4Q96C45 1275 aa12.55□□□□□ -0.4
SHPRH-211ENST00000629427 TXLNGQ9NUQ3 528 aa12.55□□□□□ -0.4
SHPRH-211ENST00000629427 SLC16A4O15374 487 aa12.55□□□□□ -0.4
SHPRH-211ENST00000629427 SSTR3P32745 418 aaPredicted RBP12.55□□□□□ -0.4
SHPRH-211ENST00000629427 AP3B2Q13367 1082 aa12.55□□□□□ -0.4
SHPRH-211ENST00000629427 MB21D1Q8N884 522 aa12.55□□□□□ -0.4
SHPRH-211ENST00000629427 TTC17Q96AE7 1141 aa12.55□□□□□ -0.4
SHPRH-211ENST00000629427 MAGEB5Q9BZ81 275 aa12.55□□□□□ -0.4
SHPRH-211ENST00000629427 KIAA1586Q9HCI6 787 aa12.55□□□□□ -0.4
SHPRH-211ENST00000629427 PYCARDQ9ULZ3 195 aa12.55□□□□□ -0.4
SHPRH-211ENST00000629427 NOVA2Q9UNW9 492 aaKnown RBP12.55□□□□□ -0.4
SHPRH-211ENST00000629427 L3MBTL1Q9Y468 752 aa12.55□□□□□ -0.4
SHPRH-211ENST00000629427 DNAJC6O75061 913 aa12.55□□□□□ -0.4
SHPRH-211ENST00000629427 CYP2D6P10635 497 aa12.55□□□□□ -0.4
SHPRH-211ENST00000629427 SMARCA1P28370 1054 aa12.55□□□□□ -0.4
SHPRH-211ENST00000629427 C6orf118Q5T5N4 469 aa12.55□□□□□ -0.4
SHPRH-211ENST00000629427 CYFIP1Q7L576 1253 aa12.55□□□□□ -0.4
SHPRH-211ENST00000629427 MORC4Q8TE76 937 aa12.55□□□□□ -0.4
SHPRH-211ENST00000629427 FBXO41Q8TF61 875 aa12.55□□□□□ -0.4
SHPRH-211ENST00000629427 PACSIN2Q9UNF0 486 aaPredicted RBP12.55□□□□□ -0.4
SHPRH-211ENST00000629427 CA4P22748 312 aa12.55□□□□□ -0.4
SHPRH-211ENST00000629427 HDLBPQ00341 1268 aaKnown RBP12.55□□□□□ -0.4
SHPRH-211ENST00000629427 PTPN12Q05209 780 aaKnown RBP12.55□□□□□ -0.4
SHPRH-211ENST00000629427 RAET1EQ8TD07 263 aa12.55□□□□□ -0.4
SHPRH-211ENST00000629427 ZNF212Q9UDV6 495 aa12.55□□□□□ -0.4
SHPRH-211ENST00000629427 DNAJC12Q9UKB3 198 aa12.55□□□□□ -0.4
SHPRH-211ENST00000629427 SETSIPP0DME0 302 aa12.54□□□□□ -0.4
SHPRH-211ENST00000629427 EEF1DP29692 281 aaKnown RBP12.54□□□□□ -0.4
SHPRH-211ENST00000629427 TBC1D9BQ66K14 1250 aa12.54□□□□□ -0.4
SHPRH-211ENST00000629427 RNF135Q8IUD6 432 aa12.54□□□□□ -0.4
SHPRH-211ENST00000629427 RHOT2Q8IXI1 618 aa12.54□□□□□ -0.4
SHPRH-211ENST00000629427 CNOT10Q9H9A5 744 aaKnown RBP12.54□□□□□ -0.4
SHPRH-211ENST00000629427 ADAMTS1Q9UHI8 967 aa12.54□□□□□ -0.4
SHPRH-211ENST00000629427 MAPK13O15264 365 aa12.54□□□□□ -0.4
SHPRH-211ENST00000629427 POU5F1BQ06416 359 aa12.54□□□□□ -0.4
SHPRH-211ENST00000629427 ARL6IP4Q66PJ3 421 aaKnown RBP12.54□□□□□ -0.4
SHPRH-211ENST00000629427 TTC23LQ6PF05 361 aa12.54□□□□□ -0.4
SHPRH-211ENST00000629427 TTC8Q8TAM2 541 aa12.54□□□□□ -0.4
SHPRH-211ENST00000629427 SH3KBP1Q96B97 665 aa12.54□□□□□ -0.4
SHPRH-211ENST00000629427 KLHL29Q96CT2 875 aa12.54□□□□□ -0.4
SHPRH-211ENST00000629427 HEMGNQ9BXL5 484 aa12.54□□□□□ -0.4
SHPRH-211ENST00000629427 RNF14Q9UBS8 474 aa12.54□□□□□ -0.4
SHPRH-211ENST00000629427 CNOT8Q9UFF9 292 aaKnown RBP12.54□□□□□ -0.4
SHPRH-211ENST00000629427 PHLPP2Q6ZVD8 1323 aa12.54□□□□□ -0.4
SHPRH-211ENST00000629427 E2F6O75461 281 aa12.54□□□□□ -0.4
SHPRH-211ENST00000629427 GCLMP48507 274 aa12.54□□□□□ -0.4
SHPRH-211ENST00000629427 SPP2Q13103 211 aa12.54□□□□□ -0.4
SHPRH-211ENST00000629427 NSUN6Q8TEA1 469 aaKnown RBP12.54□□□□□ -0.4
SHPRH-211ENST00000629427 PBXIP1Q96AQ6 731 aa12.54□□□□□ -0.4
SHPRH-211ENST00000629427 CPB1P15086 417 aa12.54□□□□□ -0.4
SHPRH-211ENST00000629427 HOXA7P31268 230 aaPredicted RBP12.54□□□□□ -0.4
SHPRH-211ENST00000629427 GPSM2P81274 684 aa12.54□□□□□ -0.4
SHPRH-211ENST00000629427 RBBP7Q16576 425 aa12.54□□□□□ -0.4
SHPRH-211ENST00000629427 ALKBH5Q6P6C2 394 aaKnown RBP12.54□□□□□ -0.4
SHPRH-211ENST00000629427 TTLL11Q8NHH1 800 aa12.54□□□□□ -0.4
SHPRH-211ENST00000629427 THOC1Q96FV9 657 aaKnown RBP12.54□□□□□ -0.4
SHPRH-211ENST00000629427 DYDC2Q96IM9 177 aa12.54□□□□□ -0.4
SHPRH-211ENST00000629427 MRPL4Q9BYD3 311 aaKnown RBP12.54□□□□□ -0.4
SHPRH-211ENST00000629427 NDFIP2Q9NV92 336 aa12.54□□□□□ -0.4
SHPRH-211ENST00000629427 FGFR1OP2Q9NVK5 253 aa12.54□□□□□ -0.4
SHPRH-211ENST00000629427 PLEKHG1Q9ULL1 1385 aa12.54□□□□□ -0.4
SHPRH-211ENST00000629427 ZRANB2O95218 330 aaKnown RBP eCLIP12.54□□□□□ -0.47e-6■■■■■ 37.3
SHPRH-211ENST00000629427 PADI6Q6TGC4 694 aa12.54□□□□□ -0.4
SHPRH-211ENST00000629427 TEX12Q9BXU0 123 aa12.54□□□□□ -0.4
SHPRH-211ENST00000629427 GABBR1Q9UBS5 961 aa12.54□□□□□ -0.4
SHPRH-211ENST00000629427 METP08581 1390 aa12.54□□□□□ -0.4
SHPRH-211ENST00000629427 USP17L15C9J2P7 530 aa12.54□□□□□ -0.4
SHPRH-211ENST00000629427 USP17L13C9JLJ4 530 aa12.54□□□□□ -0.4
SHPRH-211ENST00000629427 USP17L11C9JVI0 530 aa12.54□□□□□ -0.4
SHPRH-211ENST00000629427 USP17L18D6R9N7 530 aa12.54□□□□□ -0.4
SHPRH-211ENST00000629427 USP17L22D6RA61 530 aa12.54□□□□□ -0.4
SHPRH-211ENST00000629427 USP17L17D6RBQ6 530 aa12.54□□□□□ -0.4
SHPRH-211ENST00000629427 USP17L19D6RCP7 530 aa12.54□□□□□ -0.4
SHPRH-211ENST00000629427 USP17L20D6RJB6 530 aa12.54□□□□□ -0.4
SHPRH-211ENST00000629427 FGGP02679 453 aa12.54□□□□□ -0.4
SHPRH-211ENST00000629427 USP17L24Q0WX57 530 aa12.54□□□□□ -0.4
SHPRH-211ENST00000629427 USP17L6PQ6QN14 398 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms