RNA–Protein interactions for RNA: ENST00000629047.1

SPTAN1-216, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-216ENST00000629047 EPB41L3Q9Y2J2 1087 aaPredicted RBP2.3□□□□□ -2.04
SPTAN1-216ENST00000629047 RIPOR2Q9Y4F9 1068 aa2.3□□□□□ -2.04
SPTAN1-216ENST00000629047 NPHP3Q7Z494 1330 aa2.3□□□□□ -2.04
SPTAN1-216ENST00000629047 EVC2Q86UK5 1308 aa2.3□□□□□ -2.04
SPTAN1-216ENST00000629047 ZNF644Q9H582 1327 aaPredicted RBP2.3□□□□□ -2.04
SPTAN1-216ENST00000629047 ANKRD30BQ9BXX2 1392 aa2.3□□□□□ -2.04
SPTAN1-216ENST00000629047 CASKIN1Q8WXD9 1431 aa2.3□□□□□ -2.04
SPTAN1-216ENST00000629047 AQRO60306 1485 aaKnown RBP eCLIP2.3□□□□□ -2.04
SPTAN1-216ENST00000629047 EFCAB5A4FU69 1503 aa2.3□□□□□ -2.04
SPTAN1-216ENST00000629047 KDM5DQ9BY66 1539 aa2.3□□□□□ -2.04
SPTAN1-216ENST00000629047 SAMD9Q5K651 1589 aa2.3□□□□□ -2.04
SPTAN1-216ENST00000629047 ABCC2Q92887 1545 aa2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 ARHGEF12Q9NZN5 1544 aa2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 PIK3C2GO75747 1445 aa2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 FRMD3A2A2Y4 597 aa2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 CTAGE15A4D2H0 777 aa2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 CTAGE9A4FU28 777 aa2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 VPS37CA5D8V6 355 aaPredicted RBP2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 STXBP3O00186 592 aa2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 MEFVO15553 781 aaPredicted RBP2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 STX6O43752 255 aa2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 TADA3O75528 432 aa2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 TMCC1O94876 653 aa2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 ZNF202O95125 648 aa2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 TBC1D8O95759 1140 aa2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 SERPINC1P01008 464 aa2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 FESP07332 822 aa2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 ZFYP08048 801 aaPredicted RBP2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 CTAGE8P0CG41 777 aa2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 TROVE2P10155 538 aaKnown RBP eCLIP2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 VDRP11473 427 aa2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 TFE3P19532 575 aaPredicted RBP2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 SYT1P21579 422 aa2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 CNGA1P29973 690 aa2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 PPP2R1AP30153 589 aa2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 ALDH3A1P30838 453 aa2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 CCT6AP40227 531 aaKnown RBP2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 CCNHP51946 323 aaPredicted RBP2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 NEK2P51955 445 aa2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 RBM5P52756 815 aaKnown RBP eCLIP2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 GNG11P61952 73 aa2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 CCT2P78371 535 aaKnown RBP2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 MRPS35P82673 323 aaKnown RBP2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 LACTBP83111 547 aaPredicted RBP2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 DEUP1Q05D60 604 aa2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 NEXNQ0ZGT2 675 aa2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 LRMPQ12912 555 aa2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 CUL4BQ13620 913 aa2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 PDIA5Q14554 519 aa2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 NR1I3Q14994 352 aa2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 ANKRD1Q15327 319 aa2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 INAQ16352 499 aa2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 SKIDA1Q1XH10 827 aa2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 KIAA0753Q2KHM9 967 aa2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 KBTBD12Q3ZCT8 623 aa2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 CCDC178Q5BJE1 867 aa2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 SPECC1Q5M775 1068 aa2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 WLSQ5T9L3 541 aa2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 MFSD4BQ5TF39 518 aa2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 MEX3CQ5U5Q3 659 aaKnown RBP2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 FBXW10Q5XX13 1052 aa2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 NUGGCQ68CJ6 796 aa2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 CWF19L1Q69YN2 538 aaKnown RBP2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 SPECC1LQ69YQ0 1117 aa2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 BICRALQ6AI39 1079 aa2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 ISM2Q6H9L7 571 aa2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 ZNF280DQ6N043 979 aa2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 CPLX2Q6PUV4 134 aaKnown RBP2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 CRTC3Q6UUV7 619 aa2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 OLFM4Q6UX06 510 aa2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 LRRC31Q6UY01 552 aa2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 ATF7IPQ6VMQ6 1270 aa2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 APBB1IPQ7Z5R6 666 aaPredicted RBP2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 SRGAP1Q7Z6B7 1085 aa2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 YTHDF3Q7Z739 585 aaKnown RBP2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 CTAGE6Q86UF2 777 aa2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 STK32CQ86UX6 486 aa2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 CCAR1Q8IX12 1150 aaKnown RBP2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 CTAGE4Q8IX94 777 aa2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 SDR16C5Q8N3Y7 309 aa2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 ZNF655Q8N720 491 aaPredicted RBP2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 C3orf20Q8ND61 904 aa2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 CCDC12Q8WUD4 166 aaPredicted RBP2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 CACTINQ8WUQ7 758 aaKnown RBP2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 LEO1Q8WVC0 666 aaPredicted RBP2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 LMBR1Q8WVP7 490 aa2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 RUBCNQ92622 972 aa2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 ZKSCAN4Q969J2 545 aaPredicted RBP2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 ZNF653Q96CK0 615 aa2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 ZBTB10Q96DT7 871 aa2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 THOC1Q96FV9 657 aaKnown RBP2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 FAXDC2Q96IV6 333 aa2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 ZNF512BQ96KM6 892 aaPredicted RBP2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 RPGRIP1Q96KN7 1286 aa2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 IFT74Q96LB3 600 aa2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 SPATA32Q96LK8 384 aa2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 PLEKHG4BQ96PX9 1271 aa2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 IWS1Q96ST2 819 aa2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 MMTAG2Q9BU76 263 aaKnown RBP2.29□□□□□ -2.04
SPTAN1-216ENST00000629047 POLR3CQ9BUI4 534 aaPredicted RBP2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms