RNA–Protein interactions for RNA: ENST00000628606.1

CHRNA4-211, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

Gene CHRNA4, Length 183 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-211ENST00000628606 CYP26B1Q9NR63 512 aa17.82■□□□□ 0.44
CHRNA4-211ENST00000628606 RGS18Q9NS28 235 aa17.82■□□□□ 0.44
CHRNA4-211ENST00000628606 SUCLA2Q9P2R7 463 aaPredicted RBP17.82■□□□□ 0.44
CHRNA4-211ENST00000628606 CUL9Q8IWT3 2517 aa17.81■□□□□ 0.44
CHRNA4-211ENST00000628606 COL4A4P53420 1690 aaPredicted RBP17.81■□□□□ 0.44
CHRNA4-211ENST00000628606 COL4A6Q14031 1691 aa17.81■□□□□ 0.44
CHRNA4-211ENST00000628606 STBD1O95210 358 aa17.81■□□□□ 0.44
CHRNA4-211ENST00000628606 MCM7P33993 719 aa17.81■□□□□ 0.44
CHRNA4-211ENST00000628606 BMPR1AP36894 532 aa17.81■□□□□ 0.44
CHRNA4-211ENST00000628606 POLGP54098 1239 aaPredicted RBP17.81■□□□□ 0.44
CHRNA4-211ENST00000628606 PLA2G4FQ68DD2 849 aa17.81■□□□□ 0.44
CHRNA4-211ENST00000628606 RHPN2Q8IUC4 686 aa17.81■□□□□ 0.44
CHRNA4-211ENST00000628606 CMTR2Q8IYT2 770 aaKnown RBP17.81■□□□□ 0.44
CHRNA4-211ENST00000628606 C11orf84Q9BUA3 381 aaPredicted RBP17.81■□□□□ 0.44
CHRNA4-211ENST00000628606 RGL1Q9NZL6 768 aa17.81■□□□□ 0.44
CHRNA4-211ENST00000628606 NOL7Q9UMY1 257 aaKnown RBP17.81■□□□□ 0.44
CHRNA4-211ENST00000628606 COG5Q9UP83 839 aa17.81■□□□□ 0.44
CHRNA4-211ENST00000628606 RALGAPA2Q2PPJ7 1873 aa17.81■□□□□ 0.44
CHRNA4-211ENST00000628606 IGKV6-21A0A0C4DH24 114 aa17.8■□□□□ 0.44
CHRNA4-211ENST00000628606 MGEA5O60502 916 aa17.8■□□□□ 0.44
CHRNA4-211ENST00000628606 DARSP14868 501 aaKnown RBP17.8■□□□□ 0.44
CHRNA4-211ENST00000628606 YWHABP31946 246 aaKnown RBP17.8■□□□□ 0.44
CHRNA4-211ENST00000628606 RFC5P40937 340 aa17.8■□□□□ 0.44
CHRNA4-211ENST00000628606 MCM2P49736 904 aa17.8■□□□□ 0.44
CHRNA4-211ENST00000628606 NPEPPSP55786 919 aa17.8■□□□□ 0.44
CHRNA4-211ENST00000628606 CYP4A11Q02928 519 aa17.8■□□□□ 0.44
CHRNA4-211ENST00000628606 CTTNQ14247 550 aaKnown RBP17.8■□□□□ 0.44
CHRNA4-211ENST00000628606 PAN2Q504Q3 1202 aaKnown RBP17.8■□□□□ 0.44
CHRNA4-211ENST00000628606 XKR9Q5GH70 373 aa17.8■□□□□ 0.44
CHRNA4-211ENST00000628606 SPOUT1Q5T280 376 aaKnown RBP17.8■□□□□ 0.44
CHRNA4-211ENST00000628606 ZNF410Q86VK4 478 aa17.8■□□□□ 0.44
CHRNA4-211ENST00000628606 NEK9Q8TD19 979 aa17.8■□□□□ 0.44
CHRNA4-211ENST00000628606 CLP1Q92989 425 aaKnown RBP17.8■□□□□ 0.44
CHRNA4-211ENST00000628606 MRPL38Q96DV4 380 aaKnown RBP17.8■□□□□ 0.44
CHRNA4-211ENST00000628606 EIF2AK1Q9BQI3 630 aaKnown RBP17.8■□□□□ 0.44
CHRNA4-211ENST00000628606 COL25A1Q9BXS0 654 aaPredicted RBP17.8■□□□□ 0.44
CHRNA4-211ENST00000628606 RC3H2Q9HBD1 1191 aaKnown RBP17.8■□□□□ 0.44
CHRNA4-211ENST00000628606 ATP6V0A4Q9HBG4 840 aa17.8■□□□□ 0.44
CHRNA4-211ENST00000628606 C9IYK1 514 aa17.79■□□□□ 0.44
CHRNA4-211ENST00000628606 GAS2O43903 313 aaKnown RBP17.79■□□□□ 0.44
CHRNA4-211ENST00000628606 SFPQP23246 707 aaKnown RBP eCLIP17.79■□□□□ 0.44
CHRNA4-211ENST00000628606 SPIRE1Q08AE8 756 aa17.79■□□□□ 0.44
CHRNA4-211ENST00000628606 ORC2Q13416 577 aaPredicted RBP17.79■□□□□ 0.44
CHRNA4-211ENST00000628606 DRP2Q13474 957 aa17.79■□□□□ 0.44
CHRNA4-211ENST00000628606 TIGD5Q53EQ6 642 aa17.79■□□□□ 0.44
CHRNA4-211ENST00000628606 TCP11Q8WWU5 503 aa17.79■□□□□ 0.44
CHRNA4-211ENST00000628606 HLA-CQ95604 372 aa17.79■□□□□ 0.44
CHRNA4-211ENST00000628606 ASB2Q96Q27 587 aa17.79■□□□□ 0.44
CHRNA4-211ENST00000628606 CEP89Q96ST8 783 aa17.79■□□□□ 0.44
CHRNA4-211ENST00000628606 PLVAPQ9BX97 442 aa17.79■□□□□ 0.44
CHRNA4-211ENST00000628606 TMEM161AQ9NX61 479 aa17.79■□□□□ 0.44
CHRNA4-211ENST00000628606 DACT1Q9NYF0 836 aa17.79■□□□□ 0.44
CHRNA4-211ENST00000628606 A0A087WZ62 844 aa17.78■□□□□ 0.44
CHRNA4-211ENST00000628606 TBKBP1A7MCY6 615 aa17.78■□□□□ 0.44
CHRNA4-211ENST00000628606 C5orf67F2Z3F1 127 aa17.78■□□□□ 0.44
CHRNA4-211ENST00000628606 HOXA2O43364 376 aa17.78■□□□□ 0.44
CHRNA4-211ENST00000628606 SLITRK3O94933 977 aa17.78■□□□□ 0.44
CHRNA4-211ENST00000628606 ZNF174Q15697 407 aa17.78■□□□□ 0.44
CHRNA4-211ENST00000628606 NOSTRINQ8IVI9 506 aa17.78■□□□□ 0.44
CHRNA4-211ENST00000628606 CRIPAKQ8N1N5 446 aa17.78■□□□□ 0.44
CHRNA4-211ENST00000628606 PSPC1Q8WXF1 523 aaKnown RBP17.78■□□□□ 0.44
CHRNA4-211ENST00000628606 NLRP4Q96MN2 994 aa17.78■□□□□ 0.44
CHRNA4-211ENST00000628606 MTMR9Q96QG7 549 aa17.78■□□□□ 0.44
CHRNA4-211ENST00000628606 FDXACB1Q9BRP7 624 aaPredicted RBP17.78■□□□□ 0.44
CHRNA4-211ENST00000628606 ELAC1Q9H777 363 aaKnown RBP17.78■□□□□ 0.44
CHRNA4-211ENST00000628606 AAASQ9NRG9 546 aa17.78■□□□□ 0.44
CHRNA4-211ENST00000628606 WRAP73Q9P2S5 460 aaPredicted RBP17.78■□□□□ 0.44
CHRNA4-211ENST00000628606 REV3LO60673 3130 aa17.77■□□□□ 0.44
CHRNA4-211ENST00000628606 TRAPPC10P48553 1259 aa17.77■□□□□ 0.44
CHRNA4-211ENST00000628606 FAM189BP81408 668 aa17.77■□□□□ 0.44
CHRNA4-211ENST00000628606 DSC3Q14574 896 aa17.77■□□□□ 0.44
CHRNA4-211ENST00000628606 NAALADL2Q58DX5 795 aa17.77■□□□□ 0.44
CHRNA4-211ENST00000628606 ABI1Q8IZP0 508 aa17.77■□□□□ 0.44
CHRNA4-211ENST00000628606 ERMNQ8TAM6 284 aa17.77■□□□□ 0.44
CHRNA4-211ENST00000628606 LMAN2LQ9H0V9 348 aa17.77■□□□□ 0.44
CHRNA4-211ENST00000628606 DHX33Q9H6R0 707 aaKnown RBP17.77■□□□□ 0.44
CHRNA4-211ENST00000628606 COL4A3BPQ9Y5P4 624 aa17.77■□□□□ 0.44
CHRNA4-211ENST00000628606 MRPL42Q9Y6G3 142 aaKnown RBP17.77■□□□□ 0.44
CHRNA4-211ENST00000628606 WNT7AO00755 349 aa17.76■□□□□ 0.43
CHRNA4-211ENST00000628606 ASAP2O43150 1006 aa17.76■□□□□ 0.43
CHRNA4-211ENST00000628606 CSDE1O75534 798 aaKnown RBP17.76■□□□□ 0.43
CHRNA4-211ENST00000628606 OR52Z1P0C646 297 aa17.76■□□□□ 0.43
CHRNA4-211ENST00000628606 FGFR4P22455 802 aa17.76■□□□□ 0.43
CHRNA4-211ENST00000628606 EMC2Q15006 297 aa17.76■□□□□ 0.43
CHRNA4-211ENST00000628606 TTC38Q5R3I4 469 aa17.76■□□□□ 0.43
CHRNA4-211ENST00000628606 FAM102BQ5T8I3 360 aa17.76■□□□□ 0.43
CHRNA4-211ENST00000628606 CATSPER4Q7RTX7 472 aa17.76■□□□□ 0.43
CHRNA4-211ENST00000628606 RNF169Q8NCN4 708 aa17.76■□□□□ 0.43
CHRNA4-211ENST00000628606 P2RX5Q93086 422 aa17.76■□□□□ 0.43
CHRNA4-211ENST00000628606 TMEM143Q96AN5 459 aa17.76■□□□□ 0.43
CHRNA4-211ENST00000628606 TMX3Q96JJ7 454 aa17.76■□□□□ 0.43
CHRNA4-211ENST00000628606 TBC1D32Q96NH3 1257 aa17.76■□□□□ 0.43
CHRNA4-211ENST00000628606 MTRQ99707 1265 aa17.76■□□□□ 0.43
CHRNA4-211ENST00000628606 HSD17B14Q9BPX1 270 aa17.76■□□□□ 0.43
CHRNA4-211ENST00000628606 TMEM60Q9H2L4 133 aa17.76■□□□□ 0.43
CHRNA4-211ENST00000628606 CHST12Q9NRB3 414 aa17.76■□□□□ 0.43
CHRNA4-211ENST00000628606 BMP2KQ9NSY1 1161 aaPredicted RBP17.76■□□□□ 0.43
CHRNA4-211ENST00000628606 ANKEF1Q9NU02 776 aa17.76■□□□□ 0.43
CHRNA4-211ENST00000628606 PCDHB12Q9Y5F1 795 aa17.76■□□□□ 0.43
CHRNA4-211ENST00000628606 POTEMA6NI47 508 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms