RNA–Protein interactions for RNA: ENST00000624873.3

SRGAP2-217, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SRGAP2, Length 4,705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-217ENST00000624873 EFCAB12Q6NXP0 572 aa11.03□□□□□ -0.64
SRGAP2-217ENST00000624873 GPD1LQ8N335 351 aa11.03□□□□□ -0.64
SRGAP2-217ENST00000624873 STARD7Q9NQZ5 370 aa11.03□□□□□ -0.64
SRGAP2-217ENST00000624873 PRMT7Q9NVM4 692 aaPredicted RBP11.03□□□□□ -0.64
SRGAP2-217ENST00000624873 ASIC3Q9UHC3 531 aa11.03□□□□□ -0.64
SRGAP2-217ENST00000624873 ZNF484Q5JVG2 852 aa11.03□□□□□ -0.64
SRGAP2-217ENST00000624873 SYTL5Q8TDW5 730 aaPredicted RBP11.03□□□□□ -0.64
SRGAP2-217ENST00000624873 IFT81Q8WYA0 676 aa11.03□□□□□ -0.64
SRGAP2-217ENST00000624873 KIF12Q96FN5 646 aa11.03□□□□□ -0.64
SRGAP2-217ENST00000624873 PDCD2LQ9BRP1 358 aa11.03□□□□□ -0.64
SRGAP2-217ENST00000624873 RBAKQ9NYW8 714 aaPredicted RBP11.03□□□□□ -0.64
SRGAP2-217ENST00000624873 CPSF3Q9UKF6 684 aaKnown RBP11.03□□□□□ -0.64
SRGAP2-217ENST00000624873 AKR1A1P14550 325 aa11.02□□□□□ -0.64
SRGAP2-217ENST00000624873 CFAP221Q4G0U5 840 aa11.02□□□□□ -0.64
SRGAP2-217ENST00000624873 HAUS4Q9H6D7 363 aa11.02□□□□□ -0.64
SRGAP2-217ENST00000624873 SLC38A10Q9HBR0 1119 aa11.02□□□□□ -0.64
SRGAP2-217ENST00000624873 GOLGA8SH3BPF8 625 aa11.02□□□□□ -0.65
SRGAP2-217ENST00000624873 SCN4BQ8IWT1 228 aa11.02□□□□□ -0.65
SRGAP2-217ENST00000624873 FBXO16Q8IX29 292 aaPredicted RBP11.02□□□□□ -0.65
SRGAP2-217ENST00000624873 CCDC105Q8IYK2 499 aa11.02□□□□□ -0.65
SRGAP2-217ENST00000624873 ARFGAP3Q9NP61 516 aa11.02□□□□□ -0.65
SRGAP2-217ENST00000624873 VTA1Q9NP79 307 aa11.02□□□□□ -0.65
SRGAP2-217ENST00000624873 TAF6LQ9Y6J9 622 aa11.02□□□□□ -0.65
SRGAP2-217ENST00000624873 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.02□□□□□ -0.65
SRGAP2-217ENST00000624873 NFIBO00712 420 aa11.02□□□□□ -0.65
SRGAP2-217ENST00000624873 STAG3L1P0CL83 205 aa11.02□□□□□ -0.65
SRGAP2-217ENST00000624873 TBXAS1P24557 533 aaPredicted RBP11.02□□□□□ -0.65
SRGAP2-217ENST00000624873 SREBF1P36956 1147 aa11.02□□□□□ -0.65
SRGAP2-217ENST00000624873 SARNPP82979 210 aaKnown RBP11.02□□□□□ -0.65
SRGAP2-217ENST00000624873 DNAJC24Q6P3W2 148 aa11.02□□□□□ -0.65
SRGAP2-217ENST00000624873 PPP1R21Q6ZMI0 780 aa11.02□□□□□ -0.65
SRGAP2-217ENST00000624873 ZNF653Q96CK0 615 aa11.02□□□□□ -0.65
SRGAP2-217ENST00000624873 IL25Q9H293 177 aa11.02□□□□□ -0.65
SRGAP2-217ENST00000624873 EPN1Q9Y6I3 576 aaPredicted RBP11.02□□□□□ -0.65
SRGAP2-217ENST00000624873 SKIP12755 728 aa11.01□□□□□ -0.65
SRGAP2-217ENST00000624873 ADORA2AP29274 412 aa11.01□□□□□ -0.65
SRGAP2-217ENST00000624873 VAMP7P51809 220 aa11.01□□□□□ -0.65
SRGAP2-217ENST00000624873 VEPH1Q14D04 833 aa11.01□□□□□ -0.65
SRGAP2-217ENST00000624873 PPP2R5EQ16537 467 aa11.01□□□□□ -0.65
SRGAP2-217ENST00000624873 PXMP2Q9NR77 195 aa11.01□□□□□ -0.65
SRGAP2-217ENST00000624873 WDR70Q9NW82 654 aa11.01□□□□□ -0.65
SRGAP2-217ENST00000624873 HPS5Q9UPZ3 1129 aa11.01□□□□□ -0.65
SRGAP2-217ENST00000624873 UTP11Q9Y3A2 253 aaKnown RBP11.01□□□□□ -0.65
SRGAP2-217ENST00000624873 FAM205CA6NFA0 338 aa11.01□□□□□ -0.65
SRGAP2-217ENST00000624873 DPYSL4O14531 572 aa11.01□□□□□ -0.65
SRGAP2-217ENST00000624873 FKTNO75072 461 aa11.01□□□□□ -0.65
SRGAP2-217ENST00000624873 GCLMP48507 274 aa11.01□□□□□ -0.65
SRGAP2-217ENST00000624873 PAK2Q13177 524 aa11.01□□□□□ -0.65
SRGAP2-217ENST00000624873 GRIK5Q16478 980 aa11.01□□□□□ -0.65
SRGAP2-217ENST00000624873 PCNX4Q63HM2 1172 aa11.01□□□□□ -0.65
SRGAP2-217ENST00000624873 C8orf74Q6P047 294 aa11.01□□□□□ -0.65
SRGAP2-217ENST00000624873 LRP10Q7Z4F1 713 aa11.01□□□□□ -0.65
SRGAP2-217ENST00000624873 NME8Q8N427 588 aa11.01□□□□□ -0.65
SRGAP2-217ENST00000624873 GSDMBQ8TAX9 411 aa11.01□□□□□ -0.65
SRGAP2-217ENST00000624873 RSAD2Q8WXG1 361 aa11.01□□□□□ -0.65
SRGAP2-217ENST00000624873 DPF3Q92784 378 aa11.01□□□□□ -0.65
SRGAP2-217ENST00000624873 SALL3Q9BXA9 1300 aa11.01□□□□□ -0.65
SRGAP2-217ENST00000624873 MSCO60682 206 aa11.01□□□□□ -0.65
SRGAP2-217ENST00000624873 GFPT2O94808 682 aa11.01□□□□□ -0.65
SRGAP2-217ENST00000624873 UPP2O95045 317 aa11.01□□□□□ -0.65
SRGAP2-217ENST00000624873 KRT39Q6A163 491 aa11.01□□□□□ -0.65
SRGAP2-217ENST00000624873 ZNF541Q9H0D2 1346 aa11.01□□□□□ -0.65
SRGAP2-217ENST00000624873 RNF208Q9H0X6 261 aa11.01□□□□□ -0.65
SRGAP2-217ENST00000624873 SAMSN1Q9NSI8 373 aaKnown RBP11.01□□□□□ -0.65
SRGAP2-217ENST00000624873 SLC8A2Q9UPR5 921 aa11.01□□□□□ -0.65
SRGAP2-217ENST00000624873 PITPNM2Q9BZ72 1349 aa11.01□□□□□ -0.65
SRGAP2-217ENST00000624873 ITGA4P13612 1032 aa11.01□□□□□ -0.65
SRGAP2-217ENST00000624873 PLS3P13797 630 aa11.01□□□□□ -0.65
SRGAP2-217ENST00000624873 XPAP23025 273 aaPredicted RBP11.01□□□□□ -0.65
SRGAP2-217ENST00000624873 FXR2P51116 673 aaKnown RBP eCLIP11.01□□□□□ -0.653e-6■■■■□ 23.4
SRGAP2-217ENST00000624873 ZBED6P86452 979 aa11.01□□□□□ -0.65
SRGAP2-217ENST00000624873 RBM10P98175 930 aaKnown RBP11.01□□□□□ -0.65
SRGAP2-217ENST00000624873 GOLGA8FQ08AF8 430 aa11.01□□□□□ -0.65
SRGAP2-217ENST00000624873 GOLGA8DPQ0D2H9 430 aa11.01□□□□□ -0.65
SRGAP2-217ENST00000624873 CATSPERGQ6ZRH7 1159 aa11.01□□□□□ -0.65
SRGAP2-217ENST00000624873 ANKS1AQ92625 1134 aa11.01□□□□□ -0.65
SRGAP2-217ENST00000624873 KCNB2Q92953 911 aa11.01□□□□□ -0.65
SRGAP2-217ENST00000624873 MKL1Q969V6 931 aa11.01□□□□□ -0.65
SRGAP2-217ENST00000624873 SH2D3AQ9BRG2 576 aa11.01□□□□□ -0.65
SRGAP2-217ENST00000624873 POLR3CQ9BUI4 534 aaPredicted RBP11.01□□□□□ -0.65
SRGAP2-217ENST00000624873 SLC38A7Q9NVC3 462 aa11.01□□□□□ -0.65
SRGAP2-217ENST00000624873 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.01□□□□□ -0.65
SRGAP2-217ENST00000624873 DONSONQ9NYP3 566 aa11.01□□□□□ -0.65
SRGAP2-217ENST00000624873 FBXO2Q9UK22 296 aaPredicted RBP11.01□□□□□ -0.65
SRGAP2-217ENST00000624873 CPB1P15086 417 aa11□□□□□ -0.65
SRGAP2-217ENST00000624873 CASP14P31944 242 aa11□□□□□ -0.65
SRGAP2-217ENST00000624873 THPOP40225 353 aa11□□□□□ -0.65
SRGAP2-217ENST00000624873 RINT1Q6NUQ1 792 aa11□□□□□ -0.65
SRGAP2-217ENST00000624873 METTL7BQ6UX53 244 aa11□□□□□ -0.65
SRGAP2-217ENST00000624873 CCDC63Q8NA47 563 aa11□□□□□ -0.65
SRGAP2-217ENST00000624873 RIC1Q4ADV7 1423 aa11□□□□□ -0.65
SRGAP2-217ENST00000624873 PDXKO00764 312 aa11□□□□□ -0.65
SRGAP2-217ENST00000624873 MSH4O15457 936 aa11□□□□□ -0.65
SRGAP2-217ENST00000624873 ARL4AP40617 200 aa11□□□□□ -0.65
SRGAP2-217ENST00000624873 ERICH1Q86X53 443 aa11□□□□□ -0.65
SRGAP2-217ENST00000624873 FMR1NBQ8N0W7 255 aaPredicted RBP11□□□□□ -0.65
SRGAP2-217ENST00000624873 TMEM35BQ8NCS4 154 aa11□□□□□ -0.65
SRGAP2-217ENST00000624873 KLRG1Q96E93 195 aa11□□□□□ -0.65
SRGAP2-217ENST00000624873 SAAL1Q96ER3 474 aa11□□□□□ -0.65
SRGAP2-217ENST00000624873 NCAPGQ9BPX3 1015 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms