RNA–Protein interactions for RNA: ENST00000624166.3

ATRX-214, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 4,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-214ENST00000624166 FAM228BP0C875 321 aa12.7□□□□□ -0.38
ATRX-214ENST00000624166 CRKLP46109 303 aaKnown RBP12.7□□□□□ -0.38
ATRX-214ENST00000624166 KLC1Q07866 573 aa12.7□□□□□ -0.38
ATRX-214ENST00000624166 PKN1Q16512 942 aa12.7□□□□□ -0.38
ATRX-214ENST00000624166 ZC3H18Q86VM9 953 aaKnown RBP12.7□□□□□ -0.38
ATRX-214ENST00000624166 JAMLQ86YT9 394 aa12.7□□□□□ -0.38
ATRX-214ENST00000624166 METTL13Q8N6R0 699 aa12.7□□□□□ -0.38
ATRX-214ENST00000624166 SYT2Q8N9I0 419 aaPredicted RBP12.7□□□□□ -0.38
ATRX-214ENST00000624166 SLC17A8Q8NDX2 589 aa12.7□□□□□ -0.38
ATRX-214ENST00000624166 ARHGEF10LQ9HCE6 1279 aa12.7□□□□□ -0.38
ATRX-214ENST00000624166 PKD2L1Q9P0L9 805 aa12.7□□□□□ -0.38
ATRX-214ENST00000624166 SLC26A4O43511 780 aa12.69□□□□□ -0.38
ATRX-214ENST00000624166 INHBAP08476 426 aa12.69□□□□□ -0.38
ATRX-214ENST00000624166 NQO1P15559 274 aaKnown RBP12.69□□□□□ -0.38
ATRX-214ENST00000624166 MXI1P50539 228 aa12.69□□□□□ -0.38
ATRX-214ENST00000624166 TBC1D9BQ66K14 1250 aa12.69□□□□□ -0.38
ATRX-214ENST00000624166 RNF168Q8IYW5 571 aaPredicted RBP12.69□□□□□ -0.38
ATRX-214ENST00000624166 BHMT2Q9H2M3 363 aa12.69□□□□□ -0.38
ATRX-214ENST00000624166 MRPL47Q9HD33 250 aaKnown RBP12.69□□□□□ -0.38
ATRX-214ENST00000624166 MLXIPLQ9NP71 852 aa12.69□□□□□ -0.38
ATRX-214ENST00000624166 SENP1Q9P0U3 644 aa12.69□□□□□ -0.38
ATRX-214ENST00000624166 ANP32DO95626 131 aa12.69□□□□□ -0.38
ATRX-214ENST00000624166 MYBL2P10244 700 aa12.69□□□□□ -0.38
ATRX-214ENST00000624166 COPS2P61201 443 aa12.69□□□□□ -0.38
ATRX-214ENST00000624166 CDR2Q01850 454 aa12.69□□□□□ -0.38
ATRX-214ENST00000624166 SEPT6Q14141 434 aa12.69□□□□□ -0.38
ATRX-214ENST00000624166 STAT4Q14765 748 aa12.69□□□□□ -0.38
ATRX-214ENST00000624166 MAP7D1Q3KQU3 841 aa12.69□□□□□ -0.38
ATRX-214ENST00000624166 MIER3Q7Z3K6 550 aa12.69□□□□□ -0.38
ATRX-214ENST00000624166 LRRC34Q8IZ02 419 aa12.69□□□□□ -0.38
ATRX-214ENST00000624166 ST13P4Q8IZP2 240 aaPredicted RBP12.69□□□□□ -0.38
ATRX-214ENST00000624166 ZNF507Q8TCN5 953 aa12.69□□□□□ -0.38
ATRX-214ENST00000624166 MTMR8Q96EF0 704 aa12.69□□□□□ -0.38
ATRX-214ENST00000624166 ANKRD27Q96NW4 1050 aa12.69□□□□□ -0.38
ATRX-214ENST00000624166 THEGQ9P2T0 379 aa12.69□□□□□ -0.38
ATRX-214ENST00000624166 USH1CQ9Y6N9 552 aa12.69□□□□□ -0.38
ATRX-214ENST00000624166 IPO5O00410 1097 aaKnown RBP12.69□□□□□ -0.38
ATRX-214ENST00000624166 IGF2BP3O00425 579 aaKnown RBP eCLIP12.69□□□□□ -0.38
ATRX-214ENST00000624166 TRIP13Q15645 432 aaPredicted RBP12.69□□□□□ -0.38
ATRX-214ENST00000624166 SLFN13Q68D06 897 aa12.69□□□□□ -0.38
ATRX-214ENST00000624166 CENPUQ71F23 418 aa12.69□□□□□ -0.38
ATRX-214ENST00000624166 MDM1Q8TC05 714 aa12.69□□□□□ -0.38
ATRX-214ENST00000624166 CCDC127Q96BQ5 260 aa12.69□□□□□ -0.38
ATRX-214ENST00000624166 ACCSQ96QU6 501 aa12.69□□□□□ -0.38
ATRX-214ENST00000624166 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.69□□□□□ -0.38
ATRX-214ENST00000624166 SLC16A3O15427 465 aaKnown RBP12.68□□□□□ -0.38
ATRX-214ENST00000624166 ASAP2O43150 1006 aa12.68□□□□□ -0.38
ATRX-214ENST00000624166 TRAPPC3O43617 180 aa12.68□□□□□ -0.38
ATRX-214ENST00000624166 CDH16O75309 829 aa12.68□□□□□ -0.38
ATRX-214ENST00000624166 ATP6V1G2O95670 118 aa12.68□□□□□ -0.38
ATRX-214ENST00000624166 FGFR4P22455 802 aa12.68□□□□□ -0.38
ATRX-214ENST00000624166 AP3B2Q13367 1082 aa12.68□□□□□ -0.38
ATRX-214ENST00000624166 ALCAMQ13740 583 aa12.68□□□□□ -0.38
ATRX-214ENST00000624166 BTNL9Q6UXG8 535 aa12.68□□□□□ -0.38
ATRX-214ENST00000624166 TPCN2Q8NHX9 752 aa12.68□□□□□ -0.38
ATRX-214ENST00000624166 PPP4R1Q8TF05 950 aa12.68□□□□□ -0.38
ATRX-214ENST00000624166 TEKT3Q9BXF9 490 aa12.68□□□□□ -0.38
ATRX-214ENST00000624166 ANO3Q9BYT9 981 aa12.68□□□□□ -0.38
ATRX-214ENST00000624166 TDP2O95551 362 aa12.68□□□□□ -0.38
ATRX-214ENST00000624166 MT-ND3P03897 115 aa12.68□□□□□ -0.38
ATRX-214ENST00000624166 TMEM253P0C7T8 217 aa12.68□□□□□ -0.38
ATRX-214ENST00000624166 PDHBP11177 359 aa12.68□□□□□ -0.38
ATRX-214ENST00000624166 PMS1P54277 932 aaKnown RBP12.68□□□□□ -0.38
ATRX-214ENST00000624166 HADHQ16836 314 aaKnown RBP12.68□□□□□ -0.38
ATRX-214ENST00000624166 SYDE1Q6ZW31 735 aaPredicted RBP12.68□□□□□ -0.38
ATRX-214ENST00000624166 SLC35G2Q8TBE7 412 aa12.68□□□□□ -0.38
ATRX-214ENST00000624166 SNF8Q96H20 258 aa12.68□□□□□ -0.38
ATRX-214ENST00000624166 SH3GL2Q99962 352 aa12.68□□□□□ -0.38
ATRX-214ENST00000624166 WDR11Q9BZH6 1224 aa12.68□□□□□ -0.38
ATRX-214ENST00000624166 DNAJC17Q9NVM6 304 aaKnown RBP12.68□□□□□ -0.38
ATRX-214ENST00000624166 NAGPAQ9UK23 515 aa12.68□□□□□ -0.38
ATRX-214ENST00000624166 POTEB3A0JP26 581 aa12.68□□□□□ -0.38
ATRX-214ENST00000624166 POTECB2RU33 542 aa12.68□□□□□ -0.38
ATRX-214ENST00000624166 GNPATO15228 680 aa12.68□□□□□ -0.38
ATRX-214ENST00000624166 PFDN1O60925 122 aa12.68□□□□□ -0.38
ATRX-214ENST00000624166 DNAJC8O75937 253 aaPredicted RBP12.68□□□□□ -0.38
ATRX-214ENST00000624166 TNNI1P19237 187 aa12.68□□□□□ -0.38
ATRX-214ENST00000624166 ATP2B4P23634 1241 aa12.68□□□□□ -0.38
ATRX-214ENST00000624166 LLGL1Q15334 1064 aa12.68□□□□□ -0.38
ATRX-214ENST00000624166 RBM26Q5T8P6 1007 aaKnown RBP12.68□□□□□ -0.38
ATRX-214ENST00000624166 WDR59Q6PJI9 974 aa12.68□□□□□ -0.38
ATRX-214ENST00000624166 POTEBQ6S5H4 581 aa12.68□□□□□ -0.38
ATRX-214ENST00000624166 SMC1BQ8NDV3 1235 aa12.68□□□□□ -0.38
ATRX-214ENST00000624166 A1CFQ9NQ94 594 aaKnown RBP12.68□□□□□ -0.38
ATRX-214ENST00000624166 TMEM260Q9NX78 707 aa12.68□□□□□ -0.38
ATRX-214ENST00000624166 ENO4A6NNW6 628 aa12.68□□□□□ -0.38
ATRX-214ENST00000624166 RIMBP2O15034 1052 aa12.68□□□□□ -0.38
ATRX-214ENST00000624166 HAUS5O94927 633 aa12.68□□□□□ -0.38
ATRX-214ENST00000624166 FTLP02792 175 aaPredicted RBP12.68□□□□□ -0.38
ATRX-214ENST00000624166 FAM153BP0C7A2 387 aa12.68□□□□□ -0.38
ATRX-214ENST00000624166 PRDX5P30044 214 aa12.68□□□□□ -0.38
ATRX-214ENST00000624166 FXR2P51116 673 aaKnown RBP eCLIP12.68□□□□□ -0.387e-8■■■□□ 18.2
ATRX-214ENST00000624166 TRPC3Q13507 836 aa12.68□□□□□ -0.38
ATRX-214ENST00000624166 SLC29A2Q14542 456 aa12.68□□□□□ -0.38
ATRX-214ENST00000624166 FAM153CQ494X1 144 aa12.68□□□□□ -0.38
ATRX-214ENST00000624166 DUSP9Q99956 384 aaKnown RBP12.68□□□□□ -0.38
ATRX-214ENST00000624166 STK33Q9BYT3 514 aa12.68□□□□□ -0.38
ATRX-214ENST00000624166 CELF4Q9BZC1 486 aaKnown RBP12.68□□□□□ -0.38
ATRX-214ENST00000624166 SUDS3Q9H7L9 328 aaPredicted RBP12.68□□□□□ -0.38
ATRX-214ENST00000624166 FAM153AQ9UHL3 310 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms