RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 MCCD1P59942 119 aaPredicted RBP10.47□□□□□ -0.73
IGHV3-54-201ENST00000622166 ERVK-9P63128 1117 aa10.47□□□□□ -0.73
IGHV3-54-201ENST00000622166 KCNA1Q09470 495 aa10.47□□□□□ -0.73
IGHV3-54-201ENST00000622166 KIF22Q14807 665 aa10.47□□□□□ -0.73
IGHV3-54-201ENST00000622166 GJB7Q6PEY0 223 aa10.47□□□□□ -0.73
IGHV3-54-201ENST00000622166 HS2ST1Q7LGA3 356 aa10.47□□□□□ -0.73
IGHV3-54-201ENST00000622166 PEX26Q7Z412 305 aa10.47□□□□□ -0.73
IGHV3-54-201ENST00000622166 FAM160B2Q86V87 743 aa10.47□□□□□ -0.73
IGHV3-54-201ENST00000622166 TPH2Q8IWU9 490 aa10.47□□□□□ -0.73
IGHV3-54-201ENST00000622166 KLHL7Q8IXQ5 586 aa10.47□□□□□ -0.73
IGHV3-54-201ENST00000622166 PIGOQ8TEQ8 1089 aa10.47□□□□□ -0.73
IGHV3-54-201ENST00000622166 CHURC1Q8WUH1 139 aa10.47□□□□□ -0.73
IGHV3-54-201ENST00000622166 SEC14L1Q92503 715 aa10.47□□□□□ -0.73
IGHV3-54-201ENST00000622166 ZNF622Q969S3 477 aaKnown RBP eCLIP10.47□□□□□ -0.73
IGHV3-54-201ENST00000622166 LRRC45Q96CN5 670 aa10.47□□□□□ -0.73
IGHV3-54-201ENST00000622166 INTS2Q9H0H0 1204 aaKnown RBP10.47□□□□□ -0.73
IGHV3-54-201ENST00000622166 QTRT2Q9H974 415 aaKnown RBP10.47□□□□□ -0.73
IGHV3-54-201ENST00000622166 TMBIM4Q9HC24 238 aa10.47□□□□□ -0.73
IGHV3-54-201ENST00000622166 GOPCQ9HD26 462 aa10.47□□□□□ -0.73
IGHV3-54-201ENST00000622166 AGPAT3Q9NRZ7 376 aa10.47□□□□□ -0.73
IGHV3-54-201ENST00000622166 TMEM51Q9NW97 253 aa10.47□□□□□ -0.73
IGHV3-54-201ENST00000622166 DNAJC12Q9UKB3 198 aa10.47□□□□□ -0.73
IGHV3-54-201ENST00000622166 ESYT3A0FGR9 886 aa10.46□□□□□ -0.73
IGHV3-54-201ENST00000622166 SFI1A8K8P3 1242 aa10.46□□□□□ -0.73
IGHV3-54-201ENST00000622166 H0YIN7 160 aa10.46□□□□□ -0.73
IGHV3-54-201ENST00000622166 TRIM66O15016 1216 aa10.46□□□□□ -0.73
IGHV3-54-201ENST00000622166 DDX3YO15523 660 aaKnown RBP10.46□□□□□ -0.73
IGHV3-54-201ENST00000622166 ZEB2O60315 1214 aa10.46□□□□□ -0.73
IGHV3-54-201ENST00000622166 GAS7O60861 476 aa10.46□□□□□ -0.73
IGHV3-54-201ENST00000622166 CPP00450 1065 aa10.46□□□□□ -0.73
IGHV3-54-201ENST00000622166 DNA2P51530 1060 aa10.46□□□□□ -0.73
IGHV3-54-201ENST00000622166 SETQ01105 290 aaPredicted RBP10.46□□□□□ -0.73
IGHV3-54-201ENST00000622166 MAPK7Q13164 816 aa10.46□□□□□ -0.73
IGHV3-54-201ENST00000622166 ALCAMQ13740 583 aa10.46□□□□□ -0.73
IGHV3-54-201ENST00000622166 DRAP1Q14919 205 aaPredicted RBP10.46□□□□□ -0.73
IGHV3-54-201ENST00000622166 CLUL1Q15846 466 aa10.46□□□□□ -0.73
IGHV3-54-201ENST00000622166 PPP2R5EQ16537 467 aa10.46□□□□□ -0.73
IGHV3-54-201ENST00000622166 CEP55Q53EZ4 464 aa10.46□□□□□ -0.73
IGHV3-54-201ENST00000622166 ZC2HC1CQ53FD0 456 aaPredicted RBP10.46□□□□□ -0.73
IGHV3-54-201ENST00000622166 KIAA1755Q5JYT7 1200 aa10.46□□□□□ -0.73
IGHV3-54-201ENST00000622166 SPDYCQ5MJ68 293 aa10.46□□□□□ -0.73
IGHV3-54-201ENST00000622166 NIPA1Q7RTP0 329 aa10.46□□□□□ -0.73
IGHV3-54-201ENST00000622166 C12orf56Q8IXR9 622 aa10.46□□□□□ -0.73
IGHV3-54-201ENST00000622166 C10orf67Q8IYJ2 551 aa10.46□□□□□ -0.73
IGHV3-54-201ENST00000622166 SUPT20HQ8NEM7 779 aa10.46□□□□□ -0.73
IGHV3-54-201ENST00000622166 CCDC26Q8TAB7 109 aa10.46□□□□□ -0.73
IGHV3-54-201ENST00000622166 C7orf43Q8WVR3 580 aa10.46□□□□□ -0.73
IGHV3-54-201ENST00000622166 RFFLQ8WZ73 363 aa10.46□□□□□ -0.73
IGHV3-54-201ENST00000622166 CNKSR1Q969H4 720 aa10.46□□□□□ -0.73
IGHV3-54-201ENST00000622166 PRMT6Q96LA8 375 aaPredicted RBP10.46□□□□□ -0.73
IGHV3-54-201ENST00000622166 ATP6V1G3Q96LB4 118 aa10.46□□□□□ -0.73
IGHV3-54-201ENST00000622166 RIT2Q99578 217 aa10.46□□□□□ -0.73
IGHV3-54-201ENST00000622166 PAGR1Q9BTK6 254 aa10.46□□□□□ -0.73
IGHV3-54-201ENST00000622166 TEKT3Q9BXF9 490 aa10.46□□□□□ -0.73
IGHV3-54-201ENST00000622166 GPR88Q9GZN0 384 aa10.46□□□□□ -0.73
IGHV3-54-201ENST00000622166 UNC45AQ9H3U1 944 aa10.46□□□□□ -0.73
IGHV3-54-201ENST00000622166 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.46□□□□□ -0.73
IGHV3-54-201ENST00000622166 AMFRQ9UKV5 643 aa10.46□□□□□ -0.73
IGHV3-54-201ENST00000622166 USP20Q9Y2K6 914 aa10.46□□□□□ -0.73
IGHV3-54-201ENST00000622166 NOC2LQ9Y3T9 749 aaKnown RBP10.46□□□□□ -0.73
IGHV3-54-201ENST00000622166 RPTORQ8N122 1335 aa10.45□□□□□ -0.74
IGHV3-54-201ENST00000622166 ATXN2Q99700 1313 aaKnown RBP10.45□□□□□ -0.74
IGHV3-54-201ENST00000622166 A0A087WUV0 522 aaPredicted RBP10.45□□□□□ -0.74
IGHV3-54-201ENST00000622166 H0YGN5 161 aa10.45□□□□□ -0.74
IGHV3-54-201ENST00000622166 KRIT1O00522 736 aa10.45□□□□□ -0.74
IGHV3-54-201ENST00000622166 MAPK13O15264 365 aa10.45□□□□□ -0.74
IGHV3-54-201ENST00000622166 P4HA2O15460 535 aa10.45□□□□□ -0.74
IGHV3-54-201ENST00000622166 SART1O43290 800 aaKnown RBP10.45□□□□□ -0.74
IGHV3-54-201ENST00000622166 TBC1D12O60347 775 aa10.45□□□□□ -0.74
IGHV3-54-201ENST00000622166 CFBP00751 764 aa10.45□□□□□ -0.74
IGHV3-54-201ENST00000622166 BCRP11274 1271 aa10.45□□□□□ -0.74
IGHV3-54-201ENST00000622166 GUCY2FP51841 1108 aa10.45□□□□□ -0.74
IGHV3-54-201ENST00000622166 RNASE9P60153 205 aaKnown RBP10.45□□□□□ -0.74
IGHV3-54-201ENST00000622166 MYL7Q01449 175 aa10.45□□□□□ -0.74
IGHV3-54-201ENST00000622166 POU5F1Q01860 360 aaKnown RBP10.45□□□□□ -0.74
IGHV3-54-201ENST00000622166 GHRHRQ02643 423 aa10.45□□□□□ -0.74
IGHV3-54-201ENST00000622166 MTMR3Q13615 1198 aa10.45□□□□□ -0.74
IGHV3-54-201ENST00000622166 PLS1Q14651 629 aa10.45□□□□□ -0.74
IGHV3-54-201ENST00000622166 TRADDQ15628 312 aa10.45□□□□□ -0.74
IGHV3-54-201ENST00000622166 AGBL2Q5U5Z8 902 aa10.45□□□□□ -0.74
IGHV3-54-201ENST00000622166 FAM178BQ8IXR5 827 aa10.45□□□□□ -0.74
IGHV3-54-201ENST00000622166 EFCAB13Q8IY85 973 aa10.45□□□□□ -0.74
IGHV3-54-201ENST00000622166 LMO3Q8TAP4 145 aa10.45□□□□□ -0.74
IGHV3-54-201ENST00000622166 ACER1Q8TDN7 264 aa10.45□□□□□ -0.74
IGHV3-54-201ENST00000622166 FAM151AQ8WW52 585 aa10.45□□□□□ -0.74
IGHV3-54-201ENST00000622166 CSRNP1Q96S65 589 aa10.45□□□□□ -0.74
IGHV3-54-201ENST00000622166 MXRA8Q9BRK3 442 aa10.45□□□□□ -0.74
IGHV3-54-201ENST00000622166 VCPKMTQ9H867 229 aa10.45□□□□□ -0.74
IGHV3-54-201ENST00000622166 POLD4Q9HCU8 107 aa10.45□□□□□ -0.74
IGHV3-54-201ENST00000622166 FAM114A2Q9NRY5 505 aa10.45□□□□□ -0.74
IGHV3-54-201ENST00000622166 TMOD2Q9NZR1 351 aa10.45□□□□□ -0.74
IGHV3-54-201ENST00000622166 PLAAQ9Y263 795 aa10.45□□□□□ -0.74
IGHV3-54-201ENST00000622166 FRMD4BQ9Y2L6 1034 aa10.45□□□□□ -0.74
IGHV3-54-201ENST00000622166 NFS1Q9Y697 457 aa10.45□□□□□ -0.74
IGHV3-54-201ENST00000622166 ARHGEF35A5YM69 484 aa10.44□□□□□ -0.74
IGHV3-54-201ENST00000622166 TMCO5BA8MYB1 307 aa10.44□□□□□ -0.74
IGHV3-54-201ENST00000622166 EBAG9O00559 213 aa10.44□□□□□ -0.74
IGHV3-54-201ENST00000622166 PMM2O15305 246 aa10.44□□□□□ -0.74
IGHV3-54-201ENST00000622166 BUB1BO60566 1050 aaPredicted RBP10.44□□□□□ -0.74
IGHV3-54-201ENST00000622166 HIP1RO75146 1068 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms