RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 CDK5RAP1Q96SZ6 601 aaKnown RBP6.44□□□□□ -1.38
BRCA1-229ENST00000621897 KRTAP4-5Q9BYR2 181 aa6.44□□□□□ -1.38
BRCA1-229ENST00000621897 SEMA4AQ9H3S1 761 aa6.44□□□□□ -1.38
BRCA1-229ENST00000621897 SAE1Q9UBE0 346 aaPredicted RBP6.44□□□□□ -1.38
BRCA1-229ENST00000621897 SLC30A1Q9Y6M5 507 aa6.44□□□□□ -1.38
BRCA1-229ENST00000621897 C2orf78A6NCI8 922 aa6.43□□□□□ -1.38
BRCA1-229ENST00000621897 GAS7O60861 476 aa6.43□□□□□ -1.38
BRCA1-229ENST00000621897 COMTP21964 271 aa6.43□□□□□ -1.38
BRCA1-229ENST00000621897 DGKDQ16760 1214 aa6.43□□□□□ -1.38
BRCA1-229ENST00000621897 KLHDC10Q6PID8 442 aa6.43□□□□□ -1.38
BRCA1-229ENST00000621897 UNQ6494/PRO21346Q6UXR6 183 aa6.43□□□□□ -1.38
BRCA1-229ENST00000621897 NME9Q86XW9 330 aa6.43□□□□□ -1.38
BRCA1-229ENST00000621897 MFSD3Q96ES6 412 aa6.43□□□□□ -1.38
BRCA1-229ENST00000621897 MYL10Q9BUA6 226 aa6.43□□□□□ -1.38
BRCA1-229ENST00000621897 POFUT1Q9H488 388 aa6.43□□□□□ -1.38
BRCA1-229ENST00000621897 IFT57Q9NWB7 429 aa6.43□□□□□ -1.38
BRCA1-229ENST00000621897 KCMF1Q9P0J7 381 aa6.43□□□□□ -1.38
BRCA1-229ENST00000621897 USP35Q9P2H5 1018 aa6.43□□□□□ -1.38
BRCA1-229ENST00000621897 DENND2AQ9ULE3 1009 aa6.43□□□□□ -1.38
BRCA1-229ENST00000621897 VWA7Q9Y334 891 aa6.43□□□□□ -1.38
BRCA1-229ENST00000621897 TBX22Q9Y458 520 aa6.43□□□□□ -1.38
BRCA1-229ENST00000621897 LCHNA4D1U4 455 aa6.42□□□□□ -1.38
BRCA1-229ENST00000621897 ENPP3O14638 875 aa6.42□□□□□ -1.38
BRCA1-229ENST00000621897 SLC26A4O43511 780 aa6.42□□□□□ -1.38
BRCA1-229ENST00000621897 PRPF6O94906 941 aaKnown RBP6.42□□□□□ -1.38
BRCA1-229ENST00000621897 APOL3O95236 402 aa6.42□□□□□ -1.38
BRCA1-229ENST00000621897 ATP2C1P98194 919 aaPredicted RBP6.42□□□□□ -1.38
BRCA1-229ENST00000621897 FOXL1Q12952 345 aa6.42□□□□□ -1.38
BRCA1-229ENST00000621897 KANSL1Q7Z3B3 1105 aa6.42□□□□□ -1.38
BRCA1-229ENST00000621897 POLNQ7Z5Q5 900 aa6.42□□□□□ -1.38
BRCA1-229ENST00000621897 EFHBQ8N7U6 833 aa6.42□□□□□ -1.38
BRCA1-229ENST00000621897 C7orf31Q8N865 590 aa6.42□□□□□ -1.38
BRCA1-229ENST00000621897 SMC1BQ8NDV3 1235 aa6.42□□□□□ -1.38
BRCA1-229ENST00000621897 SHCBP1Q8NEM2 672 aa6.42□□□□□ -1.38
BRCA1-229ENST00000621897 HAPLN2Q9GZV7 340 aa6.42□□□□□ -1.38
BRCA1-229ENST00000621897 DNAI1Q9UI46 699 aa6.42□□□□□ -1.38
BRCA1-229ENST00000621897 PLAAQ9Y263 795 aa6.42□□□□□ -1.38
BRCA1-229ENST00000621897 TESMINQ9Y4I5 508 aa6.42□□□□□ -1.38
BRCA1-229ENST00000621897 GSG1L2A8MUP6 293 aa6.41□□□□□ -1.38
BRCA1-229ENST00000621897 ACO1P21399 889 aaKnown RBP6.41□□□□□ -1.38
BRCA1-229ENST00000621897 ADCY7P51828 1080 aa6.41□□□□□ -1.38
BRCA1-229ENST00000621897 ADAM8P78325 824 aa6.41□□□□□ -1.38
BRCA1-229ENST00000621897 SMAD3P84022 425 aaKnown RBP6.41□□□□□ -1.38
BRCA1-229ENST00000621897 ADCY2Q08462 1091 aa6.41□□□□□ -1.38
BRCA1-229ENST00000621897 ADCY1Q08828 1119 aa6.41□□□□□ -1.38
BRCA1-229ENST00000621897 RIN1Q13671 783 aa6.41□□□□□ -1.38
BRCA1-229ENST00000621897 HS1BP3Q53T59 392 aa6.41□□□□□ -1.38
BRCA1-229ENST00000621897 PHYKPLQ8IUZ5 450 aa6.41□□□□□ -1.38
BRCA1-229ENST00000621897 PPM1KQ8N3J5 372 aa6.41□□□□□ -1.38
BRCA1-229ENST00000621897 ZNF808Q8N4W9 903 aaPredicted RBP6.41□□□□□ -1.38
BRCA1-229ENST00000621897 TMEM176AQ96HP8 235 aa6.41□□□□□ -1.38
BRCA1-229ENST00000621897 GPR101Q96P66 508 aaPredicted RBP6.41□□□□□ -1.38
BRCA1-229ENST00000621897 MS4A5Q9H3V2 200 aa6.41□□□□□ -1.38
BRCA1-229ENST00000621897 MTG2Q9H4K7 406 aa6.41□□□□□ -1.38
BRCA1-229ENST00000621897 SPTLC3Q9NUV7 552 aa6.41□□□□□ -1.38
BRCA1-229ENST00000621897 A0A087X0B3 334 aa6.4□□□□□ -1.38
BRCA1-229ENST00000621897 ELL2O00472 640 aaPredicted RBP6.4□□□□□ -1.38
BRCA1-229ENST00000621897 MSX2P35548 267 aaPredicted RBP6.4□□□□□ -1.38
BRCA1-229ENST00000621897 RPS19P39019 145 aaKnown RBP6.4□□□□□ -1.38
BRCA1-229ENST00000621897 BCAR1P56945 870 aa6.4□□□□□ -1.38
BRCA1-229ENST00000621897 KIAA1841Q6NSI8 718 aa6.4□□□□□ -1.38
BRCA1-229ENST00000621897 MAMDC4Q6UXC1 1216 aa6.4□□□□□ -1.38
BRCA1-229ENST00000621897 BMP8AQ7Z5Y6 402 aa6.4□□□□□ -1.38
BRCA1-229ENST00000621897 RPGRQ92834 1020 aaKnown RBP6.4□□□□□ -1.38
BRCA1-229ENST00000621897 EDAQ92838 391 aa6.4□□□□□ -1.38
BRCA1-229ENST00000621897 DYDC2Q96IM9 177 aa6.4□□□□□ -1.38
BRCA1-229ENST00000621897 PITHD1Q9GZP4 211 aaPredicted RBP6.4□□□□□ -1.38
BRCA1-229ENST00000621897 POLR3BQ9NW08 1133 aaPredicted RBP6.4□□□□□ -1.38
BRCA1-229ENST00000621897 PLA2G3Q9NZ20 509 aa6.4□□□□□ -1.38
BRCA1-229ENST00000621897 RBM8AQ9Y5S9 174 aaKnown RBP6.4□□□□□ -1.38
BRCA1-229ENST00000621897 A0A0A6YYJ9 748 aa6.39□□□□□ -1.39
BRCA1-229ENST00000621897 H2AFYO75367 372 aaKnown RBP6.39□□□□□ -1.39
BRCA1-229ENST00000621897 HNRNPLP14866 589 aaKnown RBP eCLIP6.39□□□□□ -1.39
BRCA1-229ENST00000621897 ADCYAP1R1P41586 468 aa6.39□□□□□ -1.39
BRCA1-229ENST00000621897 KPNA1P52294 538 aaPredicted RBP6.39□□□□□ -1.39
BRCA1-229ENST00000621897 SESN2P58004 480 aaPredicted RBP6.39□□□□□ -1.39
BRCA1-229ENST00000621897 ZXDAP98168 799 aa6.39□□□□□ -1.39
BRCA1-229ENST00000621897 TCIRG1Q13488 830 aa6.39□□□□□ -1.39
BRCA1-229ENST00000621897 LRRC32Q14392 662 aa6.39□□□□□ -1.39
BRCA1-229ENST00000621897 GRM7Q14831 915 aa6.39□□□□□ -1.39
BRCA1-229ENST00000621897 PRKD1Q15139 912 aaPredicted RBP6.39□□□□□ -1.39
BRCA1-229ENST00000621897 CLEC14AQ86T13 490 aa6.39□□□□□ -1.39
BRCA1-229ENST00000621897 NOP9Q86U38 636 aaKnown RBP6.39□□□□□ -1.39
BRCA1-229ENST00000621897 ZZZ3Q8IYH5 903 aa6.39□□□□□ -1.39
BRCA1-229ENST00000621897 Q8N1X5 172 aa6.39□□□□□ -1.39
BRCA1-229ENST00000621897 GFM2Q969S9 779 aaKnown RBP6.39□□□□□ -1.39
BRCA1-229ENST00000621897 SLC7A6OSQ96CW6 309 aaPredicted RBP6.39□□□□□ -1.39
BRCA1-229ENST00000621897 ZNF496Q96IT1 587 aaPredicted RBP6.39□□□□□ -1.39
BRCA1-229ENST00000621897 RPL10LQ96L21 214 aaKnown RBP6.39□□□□□ -1.39
BRCA1-229ENST00000621897 WDR92Q96MX6 357 aa6.39□□□□□ -1.39
BRCA1-229ENST00000621897 GPHA2Q96T91 129 aa6.39□□□□□ -1.39
BRCA1-229ENST00000621897 SLC6A15Q9H2J7 730 aa6.39□□□□□ -1.39
BRCA1-229ENST00000621897 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.39□□□□□ -1.39
BRCA1-229ENST00000621897 MSL2Q9HCI7 577 aa6.39□□□□□ -1.39
BRCA1-229ENST00000621897 A0A0A6YYK5 440 aaPredicted RBP6.38□□□□□ -1.39
BRCA1-229ENST00000621897 PMS2P1A4D2B8 440 aa6.38□□□□□ -1.39
BRCA1-229ENST00000621897 PDE8AO60658 829 aa6.38□□□□□ -1.39
BRCA1-229ENST00000621897 OPHN1O60890 802 aa6.38□□□□□ -1.39
BRCA1-229ENST00000621897 AMHP03971 560 aa6.38□□□□□ -1.39
BRCA1-229ENST00000621897 CD40P25942 277 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms