RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 ATXN2LQ8WWM7 1075 aaKnown RBP21.24■□□□□ 0.99
PDLIM3-212ENST00000620787 SYT11Q9BT88 431 aa21.24■□□□□ 0.99
PDLIM3-212ENST00000620787 ADAM7Q9H2U9 754 aa21.24■□□□□ 0.99
PDLIM3-212ENST00000620787 DNM3Q9UQ16 869 aa21.24■□□□□ 0.99
PDLIM3-212ENST00000620787 GNPATO15228 680 aa21.23■□□□□ 0.99
PDLIM3-212ENST00000620787 PPIP5K2O43314 1243 aa21.23■□□□□ 0.99
PDLIM3-212ENST00000620787 UFL1O94874 794 aa21.23■□□□□ 0.99
PDLIM3-212ENST00000620787 RPA1P27694 616 aa21.23■□□□□ 0.99
PDLIM3-212ENST00000620787 KCNA1Q09470 495 aa21.23■□□□□ 0.99
PDLIM3-212ENST00000620787 ADAT2Q7Z6V5 191 aaKnown RBP21.23■□□□□ 0.99
PDLIM3-212ENST00000620787 AMIGO3Q86WK7 504 aa21.23■□□□□ 0.99
PDLIM3-212ENST00000620787 CARD9Q9H257 536 aa21.23■□□□□ 0.99
PDLIM3-212ENST00000620787 PABPC3Q9H361 631 aaKnown RBP21.23■□□□□ 0.99
PDLIM3-212ENST00000620787 DAAM1Q9Y4D1 1078 aa21.23■□□□□ 0.99
PDLIM3-212ENST00000620787 DAGLAQ9Y4D2 1042 aa21.23■□□□□ 0.99
PDLIM3-212ENST00000620787 SPATA31A5Q5VU36 1347 aa21.23■□□□□ 0.99
PDLIM3-212ENST00000620787 SPATA31A7Q8IWB4 1347 aa21.23■□□□□ 0.99
PDLIM3-212ENST00000620787 CCT8L1PA6NM43 557 aa21.23■□□□□ 0.99
PDLIM3-212ENST00000620787 MGRN1O60291 552 aa21.23■□□□□ 0.99
PDLIM3-212ENST00000620787 TRIM37O94972 964 aa21.23■□□□□ 0.99
PDLIM3-212ENST00000620787 LMNB1P20700 586 aa21.23■□□□□ 0.99
PDLIM3-212ENST00000620787 MMP13P45452 471 aa21.23■□□□□ 0.99
PDLIM3-212ENST00000620787 PMS2P54278 862 aa21.23■□□□□ 0.99
PDLIM3-212ENST00000620787 PRPF4BQ13523 1007 aaKnown RBP21.23■□□□□ 0.99
PDLIM3-212ENST00000620787 CCDC197Q8NCU1 140 aa21.23■□□□□ 0.99
PDLIM3-212ENST00000620787 RNF25Q96BH1 459 aaPredicted RBP21.23■□□□□ 0.99
PDLIM3-212ENST00000620787 PGM2Q96G03 612 aa21.23■□□□□ 0.99
PDLIM3-212ENST00000620787 FAM187AA6NFU0 413 aa21.22■□□□□ 0.99
PDLIM3-212ENST00000620787 MMEP08473 750 aa21.22■□□□□ 0.99
PDLIM3-212ENST00000620787 ELF1P32519 619 aa21.22■□□□□ 0.99
PDLIM3-212ENST00000620787 PPP2R5EQ16537 467 aa21.22■□□□□ 0.99
PDLIM3-212ENST00000620787 ZDHHC24Q6UX98 284 aa21.22■□□□□ 0.99
PDLIM3-212ENST00000620787 NEK9Q8TD19 979 aa21.22■□□□□ 0.99
PDLIM3-212ENST00000620787 GLG1Q92896 1179 aa21.22■□□□□ 0.99
PDLIM3-212ENST00000620787 ARHGEF26Q96DR7 871 aa21.22■□□□□ 0.99
PDLIM3-212ENST00000620787 PCDHB13Q9Y5F0 798 aa21.22■□□□□ 0.99
PDLIM3-212ENST00000620787 MOXD1Q6UVY6 613 aa21.22■□□□□ 0.99
PDLIM3-212ENST00000620787 CRYGNQ8WXF5 182 aa21.22■□□□□ 0.99
PDLIM3-212ENST00000620787 SCLT1Q96NL6 688 aa21.22■□□□□ 0.99
PDLIM3-212ENST00000620787 ODF2LQ9ULJ1 636 aa21.22■□□□□ 0.99
PDLIM3-212ENST00000620787 GOLGA6L10A0A0M3HER8 536 aa21.21■□□□□ 0.99
PDLIM3-212ENST00000620787 TGFB1I1O43294 461 aa21.21■□□□□ 0.99
PDLIM3-212ENST00000620787 GCNT3O95395 438 aa21.21■□□□□ 0.99
PDLIM3-212ENST00000620787 ABCB4P21439 1286 aa21.21■□□□□ 0.99
PDLIM3-212ENST00000620787 ZNF211Q13398 564 aaPredicted RBP21.21■□□□□ 0.99
PDLIM3-212ENST00000620787 QRICH1Q2TAL8 776 aa21.21■□□□□ 0.99
PDLIM3-212ENST00000620787 CEP57Q86XR8 500 aa21.21■□□□□ 0.99
PDLIM3-212ENST00000620787 JAMLQ86YT9 394 aa21.21■□□□□ 0.99
PDLIM3-212ENST00000620787 ERMNQ8TAM6 284 aa21.21■□□□□ 0.99
PDLIM3-212ENST00000620787 CTNNBL1Q8WYA6 563 aaPredicted RBP21.21■□□□□ 0.99
PDLIM3-212ENST00000620787 NAP1L3Q99457 506 aaPredicted RBP21.21■□□□□ 0.99
PDLIM3-212ENST00000620787 P2RX7Q99572 595 aaKnown RBP21.21■□□□□ 0.99
PDLIM3-212ENST00000620787 RUSC1Q9BVN2 902 aa21.21■□□□□ 0.99
PDLIM3-212ENST00000620787 GLT8D2Q9H1C3 349 aa21.21■□□□□ 0.99
PDLIM3-212ENST00000620787 GOPCQ9HD26 462 aa21.21■□□□□ 0.99
PDLIM3-212ENST00000620787 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.21■□□□□ 0.99
PDLIM3-212ENST00000620787 ZMYM2Q9UBW7 1377 aa21.21■□□□□ 0.99
PDLIM3-212ENST00000620787 KIAA0391O15091 583 aaKnown RBP21.21■□□□□ 0.99
PDLIM3-212ENST00000620787 ASAP2O43150 1006 aa21.21■□□□□ 0.99
PDLIM3-212ENST00000620787 DHX34Q14147 1143 aaKnown RBP21.21■□□□□ 0.99
PDLIM3-212ENST00000620787 PRR16Q569H4 304 aa21.21■□□□□ 0.99
PDLIM3-212ENST00000620787 KIAA1755Q5JYT7 1200 aa21.21■□□□□ 0.99
PDLIM3-212ENST00000620787 DENND2CQ68D51 928 aa21.21■□□□□ 0.99
PDLIM3-212ENST00000620787 SELENOSQ9BQE4 189 aa21.21■□□□□ 0.99
PDLIM3-212ENST00000620787 STK33Q9BYT3 514 aa21.21■□□□□ 0.99
PDLIM3-212ENST00000620787 GPR88Q9GZN0 384 aa21.21■□□□□ 0.99
PDLIM3-212ENST00000620787 DDX4Q9NQI0 724 aaKnown RBP21.21■□□□□ 0.99
PDLIM3-212ENST00000620787 SHMT1P34896 483 aa21.2■□□□□ 0.98
PDLIM3-212ENST00000620787 NF2P35240 595 aa21.2■□□□□ 0.98
PDLIM3-212ENST00000620787 PLTPP55058 493 aa21.2■□□□□ 0.98
PDLIM3-212ENST00000620787 ELF3P78545 371 aaPredicted RBP21.2■□□□□ 0.98
PDLIM3-212ENST00000620787 DRAP1Q14919 205 aaPredicted RBP21.2■□□□□ 0.98
PDLIM3-212ENST00000620787 PIGWQ7Z7B1 504 aa21.2■□□□□ 0.98
PDLIM3-212ENST00000620787 FBXO25Q8TCJ0 367 aa21.2■□□□□ 0.98
PDLIM3-212ENST00000620787 ALG3Q92685 438 aa21.2■□□□□ 0.98
PDLIM3-212ENST00000620787 IKZF4Q9H2S9 585 aa21.2■□□□□ 0.98
PDLIM3-212ENST00000620787 AZI2Q9H6S1 392 aa21.2■□□□□ 0.98
PDLIM3-212ENST00000620787 SNX24Q9Y343 169 aa21.2■□□□□ 0.98
PDLIM3-212ENST00000620787 RPTORQ8N122 1335 aa21.2■□□□□ 0.98
PDLIM3-212ENST00000620787 DRG2P55039 364 aaKnown RBP21.19■□□□□ 0.98
PDLIM3-212ENST00000620787 ARHGAP4P98171 946 aa21.19■□□□□ 0.98
PDLIM3-212ENST00000620787 MAPK7Q13164 816 aa21.19■□□□□ 0.98
PDLIM3-212ENST00000620787 BARGINQ6ZT62 677 aa21.19■□□□□ 0.98
PDLIM3-212ENST00000620787 PTF1AQ7RTS3 328 aa21.19■□□□□ 0.98
PDLIM3-212ENST00000620787 LENG9Q96B70 501 aa21.19■□□□□ 0.98
PDLIM3-212ENST00000620787 GRHL1Q9NZI5 618 aa21.19■□□□□ 0.98
PDLIM3-212ENST00000620787 DNAJC12Q9UKB3 198 aa21.19■□□□□ 0.98
PDLIM3-212ENST00000620787 PCDHA1Q9Y5I3 950 aa21.19■□□□□ 0.98
PDLIM3-212ENST00000620787 FRMPD4Q14CM0 1322 aa21.19■□□□□ 0.98
PDLIM3-212ENST00000620787 CCDC169A6NNP5 214 aa21.19■□□□□ 0.98
PDLIM3-212ENST00000620787 MEIS2O14770 477 aa21.19■□□□□ 0.98
PDLIM3-212ENST00000620787 VCAM1P19320 739 aa21.19■□□□□ 0.98
PDLIM3-212ENST00000620787 ITIH4Q14624 930 aa21.19■□□□□ 0.98
PDLIM3-212ENST00000620787 UBAP2Q5T6F2 1119 aaKnown RBP21.19■□□□□ 0.98
PDLIM3-212ENST00000620787 FAM186BQ8IYM0 893 aa21.19■□□□□ 0.98
PDLIM3-212ENST00000620787 N4BP2L2Q92802 583 aaPredicted RBP21.19■□□□□ 0.98
PDLIM3-212ENST00000620787 ARHGEF1Q92888 912 aaKnown RBP21.19■□□□□ 0.98
PDLIM3-212ENST00000620787 DONSONQ9NYP3 566 aa21.19■□□□□ 0.98
PDLIM3-212ENST00000620787 TAS2R14Q9NYV8 317 aa21.19■□□□□ 0.98
PDLIM3-212ENST00000620787 SERPINB13Q9UIV8 391 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms