RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 GBP6Q6ZN66 633 aa20.85■□□□□ 0.93
PSPC1-206ENST00000619300 SEPT14Q6ZU15 432 aa20.85■□□□□ 0.93
PSPC1-206ENST00000619300 CCDC60Q8IWA6 550 aaPredicted RBP20.85■□□□□ 0.93
PSPC1-206ENST00000619300 SLC35F6Q8N357 371 aa20.85■□□□□ 0.93
PSPC1-206ENST00000619300 CGNQ9P2M7 1197 aaKnown RBP20.85■□□□□ 0.93
PSPC1-206ENST00000619300 TRIM10Q9UDY6 481 aa20.85■□□□□ 0.93
PSPC1-206ENST00000619300 SRCAPQ6ZRS2 3230 aa20.85■□□□□ 0.93
PSPC1-206ENST00000619300 A0A0G2JMZ2 1700 aa20.85■□□□□ 0.93
PSPC1-206ENST00000619300 SSU72P8A0A1W2PR75 194 aa20.85■□□□□ 0.93
PSPC1-206ENST00000619300 GTPBP10A4D1E9 387 aaKnown RBP20.85■□□□□ 0.93
PSPC1-206ENST00000619300 RRP9O43818 475 aaKnown RBP20.85■□□□□ 0.93
PSPC1-206ENST00000619300 SORBS3O60504 671 aa20.85■□□□□ 0.93
PSPC1-206ENST00000619300 LCA5LO95447 670 aa20.85■□□□□ 0.93
PSPC1-206ENST00000619300 KIF11P52732 1056 aa20.85■□□□□ 0.93
PSPC1-206ENST00000619300 NCKAP1LP55160 1127 aa20.85■□□□□ 0.93
PSPC1-206ENST00000619300 CYP27A1Q02318 531 aa20.85■□□□□ 0.93
PSPC1-206ENST00000619300 MAPK8IP2Q13387 824 aaPredicted RBP20.85■□□□□ 0.93
PSPC1-206ENST00000619300 LDLRAD1Q5T700 205 aa20.85■□□□□ 0.93
PSPC1-206ENST00000619300 HGSNATQ68CP4 663 aa20.85■□□□□ 0.93
PSPC1-206ENST00000619300 CYFIP1Q7L576 1253 aa20.85■□□□□ 0.93
PSPC1-206ENST00000619300 FAM133AQ8N9E0 248 aa20.85■□□□□ 0.93
PSPC1-206ENST00000619300 DEF6Q9H4E7 631 aa20.85■□□□□ 0.93
PSPC1-206ENST00000619300 RBPJLQ9UBG7 517 aa20.85■□□□□ 0.93
PSPC1-206ENST00000619300 MRFAP1Q9Y605 127 aa20.85■□□□□ 0.93
PSPC1-206ENST00000619300 CTAGE9A4FU28 777 aa20.84■□□□□ 0.93
PSPC1-206ENST00000619300 ZNF263O14978 683 aa20.84■□□□□ 0.93
PSPC1-206ENST00000619300 SLC16A4O15374 487 aa20.84■□□□□ 0.93
PSPC1-206ENST00000619300 KRT86O43790 486 aa20.84■□□□□ 0.93
PSPC1-206ENST00000619300 EXOC3O60645 756 aa20.84■□□□□ 0.93
PSPC1-206ENST00000619300 SUPT20HL2P0C7V6 817 aa20.84■□□□□ 0.93
PSPC1-206ENST00000619300 ACTN1P12814 892 aa20.84■□□□□ 0.93
PSPC1-206ENST00000619300 OSBPP22059 807 aa20.84■□□□□ 0.93
PSPC1-206ENST00000619300 SLC9C1Q4G0N8 1177 aa20.84■□□□□ 0.93
PSPC1-206ENST00000619300 KLHDC7AQ5VTJ3 777 aa20.84■□□□□ 0.93
PSPC1-206ENST00000619300 JAKMIP2Q96AA8 810 aa20.84■□□□□ 0.93
PSPC1-206ENST00000619300 AIPL1Q9NZN9 384 aa20.84■□□□□ 0.93
PSPC1-206ENST00000619300 AKR1B10O60218 316 aa20.83■□□□□ 0.93
PSPC1-206ENST00000619300 TLR2O60603 784 aa20.83■□□□□ 0.93
PSPC1-206ENST00000619300 ATG7O95352 703 aa20.83■□□□□ 0.93
PSPC1-206ENST00000619300 SERPING1P05155 500 aa20.83■□□□□ 0.93
PSPC1-206ENST00000619300 SMTNP53814 917 aa20.83■□□□□ 0.93
PSPC1-206ENST00000619300 SNRPFP62306 86 aaKnown RBP20.83■□□□□ 0.93
PSPC1-206ENST00000619300 PPP2R5AQ15172 486 aa20.83■□□□□ 0.93
PSPC1-206ENST00000619300 ASTE1Q2TB18 679 aaPredicted RBP20.83■□□□□ 0.93
PSPC1-206ENST00000619300 GPAT2Q6NUI2 795 aa20.83■□□□□ 0.93
PSPC1-206ENST00000619300 PNMA8AQ86V59 439 aaPredicted RBP20.83■□□□□ 0.93
PSPC1-206ENST00000619300 C12orf56Q8IXR9 622 aa20.83■□□□□ 0.93
PSPC1-206ENST00000619300 KIFAP3Q92845 792 aa20.83■□□□□ 0.93
PSPC1-206ENST00000619300 LACRTQ9GZZ8 138 aa20.83■□□□□ 0.93
PSPC1-206ENST00000619300 TXNRD2Q9NNW7 524 aa20.83■□□□□ 0.93
PSPC1-206ENST00000619300 TFR2Q9UP52 801 aa20.83■□□□□ 0.93
PSPC1-206ENST00000619300 RCCD1A6NED2 376 aa20.83■□□□□ 0.92
PSPC1-206ENST00000619300 UCHL3P15374 230 aa20.83■□□□□ 0.92
PSPC1-206ENST00000619300 COPB2P35606 906 aa20.83■□□□□ 0.92
PSPC1-206ENST00000619300 VAV2P52735 878 aa20.83■□□□□ 0.92
PSPC1-206ENST00000619300 PRKCEQ02156 737 aa20.83■□□□□ 0.92
PSPC1-206ENST00000619300 LRRN4CLQ8ND94 238 aa20.83■□□□□ 0.92
PSPC1-206ENST00000619300 NTPCRQ9BSD7 190 aaKnown RBP20.83■□□□□ 0.92
PSPC1-206ENST00000619300 C17orf75Q9HAS0 396 aa20.83■□□□□ 0.92
PSPC1-206ENST00000619300 PDLIM7Q9NR12 457 aa20.83■□□□□ 0.92
PSPC1-206ENST00000619300 PCDHA13Q9Y5I0 950 aa20.83■□□□□ 0.92
PSPC1-206ENST00000619300 MYH11P35749 1972 aa20.83■□□□□ 0.92
PSPC1-206ENST00000619300 LCTP09848 1927 aa20.83■□□□□ 0.92
PSPC1-206ENST00000619300 KIAA1217Q5T5P2 1943 aa20.83■□□□□ 0.92
PSPC1-206ENST00000619300 DGAT1O75907 488 aa20.82■□□□□ 0.92
PSPC1-206ENST00000619300 NPTX2P47972 431 aa20.82■□□□□ 0.92
PSPC1-206ENST00000619300 DMP1Q13316 513 aaPredicted RBP20.82■□□□□ 0.92
PSPC1-206ENST00000619300 Q3C1V9 767 aa20.82■□□□□ 0.92
PSPC1-206ENST00000619300 XKR3Q5GH77 459 aa20.82■□□□□ 0.92
PSPC1-206ENST00000619300 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.82■□□□□ 0.92
PSPC1-206ENST00000619300 MNS1Q8NEH6 495 aa20.82■□□□□ 0.92
PSPC1-206ENST00000619300 CARD6Q9BX69 1037 aa20.82■□□□□ 0.92
PSPC1-206ENST00000619300 R3HDMLQ9H3Y0 253 aa20.82■□□□□ 0.92
PSPC1-206ENST00000619300 CYP26B1Q9NR63 512 aa20.82■□□□□ 0.92
PSPC1-206ENST00000619300 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.82■□□□□ 0.92
PSPC1-206ENST00000619300 FBXL5Q9UKA1 691 aa20.82■□□□□ 0.92
PSPC1-206ENST00000619300 V9GYY5 206 aaPredicted RBP20.82■□□□□ 0.92
PSPC1-206ENST00000619300 CCDC169A6NNP5 214 aa20.82■□□□□ 0.92
PSPC1-206ENST00000619300 KIF5AQ12840 1032 aa20.82■□□□□ 0.92
PSPC1-206ENST00000619300 TUBB2AQ13885 445 aa20.82■□□□□ 0.92
PSPC1-206ENST00000619300 RAPGEF1Q13905 1077 aa20.82■□□□□ 0.92
PSPC1-206ENST00000619300 GPIHBP1Q8IV16 184 aa20.82■□□□□ 0.92
PSPC1-206ENST00000619300 TMEM161BQ8NDZ6 487 aa20.82■□□□□ 0.92
PSPC1-206ENST00000619300 MCPH1Q8NEM0 835 aa20.82■□□□□ 0.92
PSPC1-206ENST00000619300 SPIRE2Q8WWL2 714 aa20.82■□□□□ 0.92
PSPC1-206ENST00000619300 SLC10A4Q96EP9 437 aa20.82■□□□□ 0.92
PSPC1-206ENST00000619300 NAPGQ99747 312 aaPredicted RBP20.82■□□□□ 0.92
PSPC1-206ENST00000619300 TUBB2BQ9BVA1 445 aa20.82■□□□□ 0.92
PSPC1-206ENST00000619300 IFIH1Q9BYX4 1025 aaKnown RBP20.82■□□□□ 0.92
PSPC1-206ENST00000619300 TSGA10Q9BZW7 698 aa20.82■□□□□ 0.92
PSPC1-206ENST00000619300 GCNT4Q9P109 453 aa20.82■□□□□ 0.92
PSPC1-206ENST00000619300 SEPT9Q9UHD8 586 aaPredicted RBP20.82■□□□□ 0.92
PSPC1-206ENST00000619300 MAFBQ9Y5Q3 323 aaPredicted RBP20.82■□□□□ 0.92
PSPC1-206ENST00000619300 SYNGAP1Q96PV0 1343 aa20.81■□□□□ 0.92
PSPC1-206ENST00000619300 IGSF9BQ9UPX0 1349 aa20.81■□□□□ 0.92
PSPC1-206ENST00000619300 GJA5P36382 358 aa20.81■□□□□ 0.92
PSPC1-206ENST00000619300 FMO5P49326 533 aa20.81■□□□□ 0.92
PSPC1-206ENST00000619300 SNAPC2Q13487 334 aa20.81■□□□□ 0.92
PSPC1-206ENST00000619300 RDH13Q8NBN7 331 aa20.81■□□□□ 0.92
PSPC1-206ENST00000619300 EHBP1Q8NDI1 1231 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms