RNA–Protein interactions for RNA: ENST00000619119.4

SEMA3B-214, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-214ENST00000619119 BICD1Q96G01 975 aa17.16■□□□□ 0.34
SEMA3B-214ENST00000619119 PHACTR1Q9C0D0 580 aa17.16■□□□□ 0.34
SEMA3B-214ENST00000619119 TRIM33Q9UPN9 1127 aa17.16■□□□□ 0.34
SEMA3B-214ENST00000619119 VIMP08670 466 aaKnown RBP17.16■□□□□ 0.34
SEMA3B-214ENST00000619119 CFAP221Q4G0U5 840 aa17.16■□□□□ 0.34
SEMA3B-214ENST00000619119 DDX42Q86XP3 938 aaKnown RBP eCLIP17.16■□□□□ 0.34
SEMA3B-214ENST00000619119 PROCA1Q8NCQ7 364 aaPredicted RBP17.16■□□□□ 0.34
SEMA3B-214ENST00000619119 DYDC1Q8WWB3 177 aa17.16■□□□□ 0.34
SEMA3B-214ENST00000619119 NELFBQ8WX92 580 aa17.16■□□□□ 0.34
SEMA3B-214ENST00000619119 FGD4Q96M96 766 aa17.16■□□□□ 0.34
SEMA3B-214ENST00000619119 PI4KBQ9UBF8 816 aa17.16■□□□□ 0.34
SEMA3B-214ENST00000619119 CAPN11Q9UMQ6 739 aa17.16■□□□□ 0.34
SEMA3B-214ENST00000619119 SCAF8Q9UPN6 1271 aaKnown RBP17.16■□□□□ 0.34
SEMA3B-214ENST00000619119 ATF5Q9Y2D1 282 aaPredicted RBP17.16■□□□□ 0.34
SEMA3B-214ENST00000619119 IGKV6D-41A0A0C4DH26 115 aa17.15■□□□□ 0.34
SEMA3B-214ENST00000619119 HIP1RO75146 1068 aa17.15■□□□□ 0.34
SEMA3B-214ENST00000619119 RARAP10276 462 aa17.15■□□□□ 0.34
SEMA3B-214ENST00000619119 STAT6P42226 847 aa17.15■□□□□ 0.34
SEMA3B-214ENST00000619119 TRAPPC10P48553 1259 aa17.15■□□□□ 0.34
SEMA3B-214ENST00000619119 PAK1Q13153 545 aa17.15■□□□□ 0.34
SEMA3B-214ENST00000619119 LRIG3Q6UXM1 1119 aa17.15■□□□□ 0.34
SEMA3B-214ENST00000619119 ZNF662Q6ZS27 426 aa17.15■□□□□ 0.34
SEMA3B-214ENST00000619119 CCDC42Q96M95 316 aa17.15■□□□□ 0.34
SEMA3B-214ENST00000619119 FAM129AQ9BZQ8 928 aa17.15■□□□□ 0.34
SEMA3B-214ENST00000619119 SH2D4AQ9H788 454 aa17.15■□□□□ 0.34
SEMA3B-214ENST00000619119 M0R2N6 131 aa17.15■□□□□ 0.34
SEMA3B-214ENST00000619119 BUB1O43683 1085 aa17.15■□□□□ 0.34
SEMA3B-214ENST00000619119 CCNT1O60563 726 aaKnown RBP17.15■□□□□ 0.34
SEMA3B-214ENST00000619119 SHBGP04278 402 aa17.15■□□□□ 0.34
SEMA3B-214ENST00000619119 MMEP08473 750 aa17.15■□□□□ 0.34
SEMA3B-214ENST00000619119 MSH2P43246 934 aa17.15■□□□□ 0.34
SEMA3B-214ENST00000619119 SEPT2Q15019 361 aa17.15■□□□□ 0.34
SEMA3B-214ENST00000619119 KIFAP3Q92845 792 aa17.15■□□□□ 0.34
SEMA3B-214ENST00000619119 EEF2KMTQ96G04 330 aa17.15■□□□□ 0.34
SEMA3B-214ENST00000619119 LRRC4CQ9HCJ2 640 aa17.15■□□□□ 0.34
SEMA3B-214ENST00000619119 PREBQ9HCU5 417 aa17.15■□□□□ 0.34
SEMA3B-214ENST00000619119 C6orf50Q9HD87 102 aa17.15■□□□□ 0.34
SEMA3B-214ENST00000619119 SERPINA10Q9UK55 444 aa17.15■□□□□ 0.34
SEMA3B-214ENST00000619119 GOLGA6L10A0A0M3HER8 536 aa17.14■□□□□ 0.33
SEMA3B-214ENST00000619119 EEF2P13639 858 aaKnown RBP17.14■□□□□ 0.33
SEMA3B-214ENST00000619119 ARMCX6Q7L4S7 300 aa17.14■□□□□ 0.33
SEMA3B-214ENST00000619119 PPP1R12CQ9BZL4 782 aa17.14■□□□□ 0.33
SEMA3B-214ENST00000619119 ZMYND12Q9H0C1 365 aa17.14■□□□□ 0.33
SEMA3B-214ENST00000619119 NKX1-2Q9UD57 310 aaPredicted RBP17.14■□□□□ 0.33
SEMA3B-214ENST00000619119 PNMA2Q9UL42 364 aa17.14■□□□□ 0.33
SEMA3B-214ENST00000619119 LRRC10BA6NIK2 292 aa17.14■□□□□ 0.33
SEMA3B-214ENST00000619119 H0YGN5 161 aa17.14■□□□□ 0.33
SEMA3B-214ENST00000619119 RAD51CO43502 376 aa17.14■□□□□ 0.33
SEMA3B-214ENST00000619119 ADGRF4Q8IZF3 695 aa17.14■□□□□ 0.33
SEMA3B-214ENST00000619119 SUPT20HQ8NEM7 779 aa17.14■□□□□ 0.33
SEMA3B-214ENST00000619119 FBF1Q8TES7 1133 aa17.14■□□□□ 0.33
SEMA3B-214ENST00000619119 NFS1Q9Y697 457 aa17.14■□□□□ 0.33
SEMA3B-214ENST00000619119 TRIM49BA6NDI0 452 aa17.14■□□□□ 0.33
SEMA3B-214ENST00000619119 USP17L10C9JJH3 530 aa17.14■□□□□ 0.33
SEMA3B-214ENST00000619119 NOVP48745 357 aa17.14■□□□□ 0.33
SEMA3B-214ENST00000619119 RAD23BP54727 409 aa17.14■□□□□ 0.33
SEMA3B-214ENST00000619119 ZNF543Q08ER8 600 aa17.14■□□□□ 0.33
SEMA3B-214ENST00000619119 DYNC1I2Q13409 638 aaKnown RBP17.14■□□□□ 0.33
SEMA3B-214ENST00000619119 ERMARDQ5T6L9 678 aa17.14■□□□□ 0.33
SEMA3B-214ENST00000619119 CACNA2D4Q7Z3S7 1137 aa17.14■□□□□ 0.33
SEMA3B-214ENST00000619119 PHC3Q8NDX5 983 aa17.14■□□□□ 0.33
SEMA3B-214ENST00000619119 TSPYL2Q9H2G4 693 aaPredicted RBP17.14■□□□□ 0.33
SEMA3B-214ENST00000619119 GALNT8Q9NY28 637 aa17.14■□□□□ 0.33
SEMA3B-214ENST00000619119 FBXL5Q9UKA1 691 aa17.14■□□□□ 0.33
SEMA3B-214ENST00000619119 IFNAR2P48551 515 aa17.13■□□□□ 0.33
SEMA3B-214ENST00000619119 KLC1Q07866 573 aa17.13■□□□□ 0.33
SEMA3B-214ENST00000619119 ASPRV1Q53RT3 343 aa17.13■□□□□ 0.33
SEMA3B-214ENST00000619119 CSRNP1Q96S65 589 aa17.13■□□□□ 0.33
SEMA3B-214ENST00000619119 TLR10Q9BXR5 811 aa17.13■□□□□ 0.33
SEMA3B-214ENST00000619119 MTFR1LQ9H019 292 aa17.13■□□□□ 0.33
SEMA3B-214ENST00000619119 DHX36Q9H2U1 1008 aaKnown RBP17.13■□□□□ 0.33
SEMA3B-214ENST00000619119 RIOX1Q9H6W3 641 aa17.13■□□□□ 0.33
SEMA3B-214ENST00000619119 JMJD4Q9H9V9 463 aa17.13■□□□□ 0.33
SEMA3B-214ENST00000619119 PLIN4Q96Q06 1357 aa17.13■□□□□ 0.33
SEMA3B-214ENST00000619119 PRLRP16471 622 aa17.13■□□□□ 0.33
SEMA3B-214ENST00000619119 GNA11P29992 359 aa17.13■□□□□ 0.33
SEMA3B-214ENST00000619119 SNAP25P60880 206 aa17.13■□□□□ 0.33
SEMA3B-214ENST00000619119 ITIH4Q14624 930 aa17.13■□□□□ 0.33
SEMA3B-214ENST00000619119 MEA1Q16626 185 aa17.13■□□□□ 0.33
SEMA3B-214ENST00000619119 REXO1Q8N1G1 1221 aaKnown RBP17.13■□□□□ 0.33
SEMA3B-214ENST00000619119 C4orf32Q8N8J7 132 aa17.13■□□□□ 0.33
SEMA3B-214ENST00000619119 TBCKQ8TEA7 893 aa17.13■□□□□ 0.33
SEMA3B-214ENST00000619119 DTNBP1Q96EV8 351 aa17.13■□□□□ 0.33
SEMA3B-214ENST00000619119 UIMC1Q96RL1 719 aa17.13■□□□□ 0.33
SEMA3B-214ENST00000619119 IDI2Q9BXS1 227 aa17.13■□□□□ 0.33
SEMA3B-214ENST00000619119 FOCADQ5VW36 1801 aa17.12■□□□□ 0.33
SEMA3B-214ENST00000619119 CHN1P15882 459 aa17.12■□□□□ 0.33
SEMA3B-214ENST00000619119 KCNA3P22001 575 aa17.12■□□□□ 0.33
SEMA3B-214ENST00000619119 DTHD1Q6ZMT9 781 aa17.12■□□□□ 0.33
SEMA3B-214ENST00000619119 MAF1Q9H063 256 aa17.12■□□□□ 0.33
SEMA3B-214ENST00000619119 RHBDL2Q9NX52 303 aa17.12■□□□□ 0.33
SEMA3B-214ENST00000619119 PCDHA13Q9Y5I0 950 aa17.12■□□□□ 0.33
SEMA3B-214ENST00000619119 LGALS16A8MUM7 142 aa17.12■□□□□ 0.33
SEMA3B-214ENST00000619119 SMAPO00193 183 aa17.12■□□□□ 0.33
SEMA3B-214ENST00000619119 NONOQ15233 471 aaKnown RBP eCLIP17.12■□□□□ 0.33
SEMA3B-214ENST00000619119 UBE2SQ16763 222 aa17.12■□□□□ 0.33
SEMA3B-214ENST00000619119 CC2D2BQ6DHV5 1058 aa17.12■□□□□ 0.33
SEMA3B-214ENST00000619119 SDCCAG8Q86SQ7 713 aaPredicted RBP17.12■□□□□ 0.33
SEMA3B-214ENST00000619119 SLC1A4P43007 532 aa17.12■□□□□ 0.33
SEMA3B-214ENST00000619119 ERVK-9P63128 1117 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms