RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 SMIM35A0A1B0GVV1 85 aa5.85□□□□□ -1.47
SHMT1-211ENST00000618902 VWA3AA6NCI4 1184 aa5.85□□□□□ -1.47
SHMT1-211ENST00000618902 RSPH10B2B2RC85 870 aa5.85□□□□□ -1.47
SHMT1-211ENST00000618902 M0QZ92 97 aa5.85□□□□□ -1.47
SHMT1-211ENST00000618902 MARCH6O60337 910 aa5.85□□□□□ -1.47
SHMT1-211ENST00000618902 LYPLA2O95372 231 aa5.85□□□□□ -1.47
SHMT1-211ENST00000618902 RSPH10BP0C881 870 aa5.85□□□□□ -1.47
SHMT1-211ENST00000618902 MUTP22033 750 aa5.85□□□□□ -1.47
SHMT1-211ENST00000618902 QARSP47897 775 aaKnown RBP5.85□□□□□ -1.47
SHMT1-211ENST00000618902 KCNJ6P48051 423 aa5.85□□□□□ -1.47
SHMT1-211ENST00000618902 PSMC5P62195 406 aa5.85□□□□□ -1.47
SHMT1-211ENST00000618902 GRB10Q13322 594 aa5.85□□□□□ -1.47
SHMT1-211ENST00000618902 PDIA5Q14554 519 aa5.85□□□□□ -1.47
SHMT1-211ENST00000618902 TMEM119Q4V9L6 283 aa5.85□□□□□ -1.47
SHMT1-211ENST00000618902 XKR3Q5GH77 459 aa5.85□□□□□ -1.47
SHMT1-211ENST00000618902 ZNF618Q5T7W0 954 aa5.85□□□□□ -1.47
SHMT1-211ENST00000618902 POTEGQ6S5H5 508 aa5.85□□□□□ -1.47
SHMT1-211ENST00000618902 ZNF365Q70YC5 407 aa5.85□□□□□ -1.47
SHMT1-211ENST00000618902 TPH2Q8IWU9 490 aa5.85□□□□□ -1.47
SHMT1-211ENST00000618902 C4orf19Q8IY42 314 aa5.85□□□□□ -1.47
SHMT1-211ENST00000618902 KIAA0319LQ8IZA0 1049 aa5.85□□□□□ -1.47
SHMT1-211ENST00000618902 LRRC71Q8N4P6 559 aa5.85□□□□□ -1.47
SHMT1-211ENST00000618902 DEFB123Q8N688 67 aa5.85□□□□□ -1.47
SHMT1-211ENST00000618902 NEK9Q8TD19 979 aa5.85□□□□□ -1.47
SHMT1-211ENST00000618902 PIGOQ8TEQ8 1089 aa5.85□□□□□ -1.47
SHMT1-211ENST00000618902 SEPT8Q92599 483 aa5.85□□□□□ -1.47
SHMT1-211ENST00000618902 SCLYQ96I15 445 aa5.85□□□□□ -1.47
SHMT1-211ENST00000618902 EPSTI1Q96J88 318 aa5.85□□□□□ -1.47
SHMT1-211ENST00000618902 PRIMPOLQ96LW4 560 aa5.85□□□□□ -1.47
SHMT1-211ENST00000618902 NAP1L5Q96NT1 182 aaPredicted RBP5.85□□□□□ -1.47
SHMT1-211ENST00000618902 RAD9AQ99638 391 aa5.85□□□□□ -1.47
SHMT1-211ENST00000618902 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.85□□□□□ -1.47
SHMT1-211ENST00000618902 POLR3CQ9BUI4 534 aaPredicted RBP5.85□□□□□ -1.47
SHMT1-211ENST00000618902 NIFKQ9BYG3 293 aaKnown RBP5.85□□□□□ -1.47
SHMT1-211ENST00000618902 PANK2Q9BZ23 570 aa5.85□□□□□ -1.47
SHMT1-211ENST00000618902 PPP1R12CQ9BZL4 782 aa5.85□□□□□ -1.47
SHMT1-211ENST00000618902 CDHR5Q9HBB8 845 aa5.85□□□□□ -1.47
SHMT1-211ENST00000618902 XPNPEP1Q9NQW7 623 aa5.85□□□□□ -1.47
SHMT1-211ENST00000618902 MTMR10Q9NXD2 777 aa5.85□□□□□ -1.47
SHMT1-211ENST00000618902 STK39Q9UEW8 545 aa5.85□□□□□ -1.47
SHMT1-211ENST00000618902 LRWD1Q9UFC0 647 aa5.85□□□□□ -1.47
SHMT1-211ENST00000618902 TUBE1Q9UJT0 475 aa5.85□□□□□ -1.47
SHMT1-211ENST00000618902 RCOR1Q9UKL0 485 aa5.85□□□□□ -1.47
SHMT1-211ENST00000618902 TRPC6Q9Y210 931 aa5.85□□□□□ -1.47
SHMT1-211ENST00000618902 ZKSCAN5Q9Y2L8 839 aa5.85□□□□□ -1.47
SHMT1-211ENST00000618902 SAMM50Q9Y512 469 aa5.85□□□□□ -1.47
SHMT1-211ENST00000618902 INSL6Q9Y581 213 aa5.85□□□□□ -1.47
SHMT1-211ENST00000618902 MORC2Q9Y6X9 1032 aaPredicted RBP5.85□□□□□ -1.47
SHMT1-211ENST00000618902 REV3LO60673 3130 aa5.84□□□□□ -1.47
SHMT1-211ENST00000618902 LAD1O00515 517 aa5.84□□□□□ -1.47
SHMT1-211ENST00000618902 DYNC1I1O14576 645 aa5.84□□□□□ -1.47
SHMT1-211ENST00000618902 NBNO60934 754 aa5.84□□□□□ -1.47
SHMT1-211ENST00000618902 CHRNA1P02708 482 aa5.84□□□□□ -1.47
SHMT1-211ENST00000618902 CTSHP09668 335 aa5.84□□□□□ -1.47
SHMT1-211ENST00000618902 ATP2A2P16615 1042 aaKnown RBP5.84□□□□□ -1.47
SHMT1-211ENST00000618902 DNAJB2P25686 324 aa5.84□□□□□ -1.47
SHMT1-211ENST00000618902 KLRC1P26715 233 aa5.84□□□□□ -1.47
SHMT1-211ENST00000618902 RPA1P27694 616 aa5.84□□□□□ -1.47
SHMT1-211ENST00000618902 YWHABP31946 246 aaKnown RBP5.84□□□□□ -1.47
SHMT1-211ENST00000618902 CCT6AP40227 531 aaKnown RBP5.84□□□□□ -1.47
SHMT1-211ENST00000618902 DNM2P50570 870 aa5.84□□□□□ -1.47
SHMT1-211ENST00000618902 CLCN3P51790 818 aa5.84□□□□□ -1.47
SHMT1-211ENST00000618902 CCL23P55773 120 aa5.84□□□□□ -1.47
SHMT1-211ENST00000618902 MGAT3Q09327 533 aa5.84□□□□□ -1.47
SHMT1-211ENST00000618902 TMEM62Q0P6H9 643 aa5.84□□□□□ -1.47
SHMT1-211ENST00000618902 HSP90AA2PQ14568 343 aaPredicted RBP5.84□□□□□ -1.47
SHMT1-211ENST00000618902 KARSQ15046 597 aaKnown RBP5.84□□□□□ -1.47
SHMT1-211ENST00000618902 MTERF2Q49AM1 385 aa5.84□□□□□ -1.47
SHMT1-211ENST00000618902 NAALADL2Q58DX5 795 aa5.84□□□□□ -1.47
SHMT1-211ENST00000618902 PLEKHG4Q58EX7 1191 aa5.84□□□□□ -1.47
SHMT1-211ENST00000618902 HYIQ5T013 277 aa5.84□□□□□ -1.47
SHMT1-211ENST00000618902 ARL6IP4Q66PJ3 421 aaKnown RBP5.84□□□□□ -1.47
SHMT1-211ENST00000618902 SHC4Q6S5L8 630 aa5.84□□□□□ -1.47
SHMT1-211ENST00000618902 MTHFD1LQ6UB35 978 aa5.84□□□□□ -1.47
SHMT1-211ENST00000618902 DTHD1Q6ZMT9 781 aa5.84□□□□□ -1.47
SHMT1-211ENST00000618902 CKAP2LQ8IYA6 745 aa5.84□□□□□ -1.47
SHMT1-211ENST00000618902 GPT2Q8TD30 523 aa5.84□□□□□ -1.47
SHMT1-211ENST00000618902 LEO1Q8WVC0 666 aaPredicted RBP5.84□□□□□ -1.47
SHMT1-211ENST00000618902 DNAJB3Q8WWF6 145 aa5.84□□□□□ -1.47
SHMT1-211ENST00000618902 TIFAQ96CG3 184 aa5.84□□□□□ -1.47
SHMT1-211ENST00000618902 ZNF668Q96K58 619 aaPredicted RBP5.84□□□□□ -1.47
SHMT1-211ENST00000618902 PLIN2Q99541 437 aa5.84□□□□□ -1.47
SHMT1-211ENST00000618902 INO80BQ9C086 356 aaPredicted RBP5.84□□□□□ -1.47
SHMT1-211ENST00000618902 FAM49AQ9H0Q0 323 aaPredicted RBP5.84□□□□□ -1.47
SHMT1-211ENST00000618902 CSRNP2Q9H175 543 aa5.84□□□□□ -1.47
SHMT1-211ENST00000618902 SEMA6BQ9H3T3 888 aa5.84□□□□□ -1.47
SHMT1-211ENST00000618902 DHX33Q9H6R0 707 aaKnown RBP5.84□□□□□ -1.47
SHMT1-211ENST00000618902 ZSWIM4Q9H7M6 989 aa5.84□□□□□ -1.47
SHMT1-211ENST00000618902 SLC28A3Q9HAS3 691 aa5.84□□□□□ -1.47
SHMT1-211ENST00000618902 GDPD2Q9HCC8 539 aa5.84□□□□□ -1.47
SHMT1-211ENST00000618902 POLD4Q9HCU8 107 aa5.84□□□□□ -1.47
SHMT1-211ENST00000618902 CYP26B1Q9NR63 512 aa5.84□□□□□ -1.47
SHMT1-211ENST00000618902 BMP2KQ9NSY1 1161 aaPredicted RBP5.84□□□□□ -1.47
SHMT1-211ENST00000618902 BLOC1S4Q9NUP1 217 aa5.84□□□□□ -1.47
SHMT1-211ENST00000618902 SEPT9Q9UHD8 586 aaPredicted RBP5.84□□□□□ -1.47
SHMT1-211ENST00000618902 KCNG1Q9UIX4 513 aa5.84□□□□□ -1.47
SHMT1-211ENST00000618902 CFAP45Q9UL16 551 aa5.84□□□□□ -1.47
SHMT1-211ENST00000618902 SRPRBQ9Y5M8 271 aaKnown RBP5.84□□□□□ -1.47
SHMT1-211ENST00000618902 SIP14410 1827 aa5.83□□□□□ -1.48
SHMT1-211ENST00000618902 COL4A6Q14031 1691 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms