RNA–Protein interactions for RNA: ENST00000618562.1

VEGFC-202, Transcript of vascular endothelial growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VEGFC, Length 2,064 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-202ENST00000618562 SP2Q02086 613 aa27.79■■■□□ 2.04
VEGFC-202ENST00000618562 KIF5AQ12840 1032 aa27.79■■■□□ 2.04
VEGFC-202ENST00000618562 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.79■■■□□ 2.04
VEGFC-202ENST00000618562 FAM207AQ9NSI2 230 aaPredicted RBP27.79■■■□□ 2.04
VEGFC-202ENST00000618562 SLC9A2Q9UBY0 812 aa27.79■■■□□ 2.04
VEGFC-202ENST00000618562 RCCD1A6NED2 376 aa27.78■■■□□ 2.04
VEGFC-202ENST00000618562 EIF3DO15371 548 aaKnown RBP eCLIP27.78■■■□□ 2.04
VEGFC-202ENST00000618562 LCA5LO95447 670 aa27.78■■■□□ 2.04
VEGFC-202ENST00000618562 ZNF771Q7L3S4 317 aaPredicted RBP27.78■■■□□ 2.04
VEGFC-202ENST00000618562 RPGRIP1Q96KN7 1286 aa27.78■■■□□ 2.04
VEGFC-202ENST00000618562 SH2D3AQ9BRG2 576 aa27.78■■■□□ 2.04
VEGFC-202ENST00000618562 MMRN2Q9H8L6 949 aa27.78■■■□□ 2.04
VEGFC-202ENST00000618562 PDXKO00764 312 aa27.77■■■□□ 2.04
VEGFC-202ENST00000618562 GNA14O95837 355 aa27.77■■■□□ 2.04
VEGFC-202ENST00000618562 ATP1A1P05023 1023 aaKnown RBP27.77■■■□□ 2.04
VEGFC-202ENST00000618562 GBP3Q9H0R5 595 aa27.77■■■□□ 2.04
VEGFC-202ENST00000618562 TFR2Q9UP52 801 aa27.77■■■□□ 2.04
VEGFC-202ENST00000618562 MAP2K7O14733 419 aa27.77■■■□□ 2.04
VEGFC-202ENST00000618562 BACH1O14867 736 aa27.77■■■□□ 2.04
VEGFC-202ENST00000618562 EPHB6O15197 1021 aa27.77■■■□□ 2.04
VEGFC-202ENST00000618562 ADAM9Q13443 819 aa27.77■■■□□ 2.04
VEGFC-202ENST00000618562 ZC2HC1CQ53FD0 456 aaPredicted RBP27.77■■■□□ 2.04
VEGFC-202ENST00000618562 ODR4Q5SWX8 454 aa27.77■■■□□ 2.04
VEGFC-202ENST00000618562 BEND6Q5SZJ8 279 aaPredicted RBP27.77■■■□□ 2.04
VEGFC-202ENST00000618562 ZNF720Q7Z2F6 126 aa27.77■■■□□ 2.04
VEGFC-202ENST00000618562 FAM178BQ8IXR5 827 aa27.77■■■□□ 2.04
VEGFC-202ENST00000618562 TYW1Q9NV66 732 aaKnown RBP27.77■■■□□ 2.04
VEGFC-202ENST00000618562 ARHGAP20Q9P2F6 1191 aa27.77■■■□□ 2.04
VEGFC-202ENST00000618562 USO1O60763 962 aaKnown RBP27.76■■■□□ 2.03
VEGFC-202ENST00000618562 COPB2P35606 906 aa27.76■■■□□ 2.03
VEGFC-202ENST00000618562 MARSP56192 900 aaKnown RBP27.76■■■□□ 2.03
VEGFC-202ENST00000618562 CKAP4Q07065 602 aaKnown RBP27.76■■■□□ 2.03
VEGFC-202ENST00000618562 TRMT1LQ7Z2T5 733 aaKnown RBP27.76■■■□□ 2.03
VEGFC-202ENST00000618562 MSL3Q8N5Y2 521 aaKnown RBP27.76■■■□□ 2.03
VEGFC-202ENST00000618562 MS4A4AQ96JQ5 239 aa27.76■■■□□ 2.03
VEGFC-202ENST00000618562 GABBR1Q9UBS5 961 aa27.76■■■□□ 2.03
VEGFC-202ENST00000618562 ZMYM2Q9UBW7 1377 aa27.76■■■□□ 2.03
VEGFC-202ENST00000618562 ENC1O14682 589 aa27.76■■■□□ 2.03
VEGFC-202ENST00000618562 ZNF263O14978 683 aa27.76■■■□□ 2.03
VEGFC-202ENST00000618562 SORBS3O60504 671 aa27.76■■■□□ 2.03
VEGFC-202ENST00000618562 CYP2C8P10632 490 aa27.76■■■□□ 2.03
VEGFC-202ENST00000618562 NR2F2P24468 414 aa27.76■■■□□ 2.03
VEGFC-202ENST00000618562 ACTR2P61160 394 aa27.76■■■□□ 2.03
VEGFC-202ENST00000618562 SP4Q02446 784 aa27.76■■■□□ 2.03
VEGFC-202ENST00000618562 CCDC40Q4G0X9 1142 aa27.76■■■□□ 2.03
VEGFC-202ENST00000618562 PLA2G4FQ68DD2 849 aa27.76■■■□□ 2.03
VEGFC-202ENST00000618562 SEPT14Q6ZU15 432 aa27.76■■■□□ 2.03
VEGFC-202ENST00000618562 MAEAQ7L5Y9 396 aa27.76■■■□□ 2.03
VEGFC-202ENST00000618562 NEK11Q8NG66 645 aa27.76■■■□□ 2.03
VEGFC-202ENST00000618562 BAP1Q92560 729 aa27.76■■■□□ 2.03
VEGFC-202ENST00000618562 SECISBP2LQ93073 1101 aaKnown RBP27.76■■■□□ 2.03
VEGFC-202ENST00000618562 ANKEF1Q9NU02 776 aa27.76■■■□□ 2.03
VEGFC-202ENST00000618562 ZNF862O60290 1169 aa27.75■■■□□ 2.03
VEGFC-202ENST00000618562 FKBP1BP68106 108 aa27.75■■■□□ 2.03
VEGFC-202ENST00000618562 CYP27A1Q02318 531 aa27.75■■■□□ 2.03
VEGFC-202ENST00000618562 SMC1AQ14683 1233 aaKnown RBP27.75■■■□□ 2.03
VEGFC-202ENST00000618562 ANO5Q75V66 913 aa27.75■■■□□ 2.03
VEGFC-202ENST00000618562 NOA1Q8NC60 698 aaKnown RBP27.75■■■□□ 2.03
VEGFC-202ENST00000618562 FGD4Q96M96 766 aa27.75■■■□□ 2.03
VEGFC-202ENST00000618562 GBA2Q9HCG7 927 aaPredicted RBP27.75■■■□□ 2.03
VEGFC-202ENST00000618562 ARID2Q68CP9 1835 aa27.74■■■□□ 2.03
VEGFC-202ENST00000618562 ZNFX1Q9P2E3 1918 aaKnown RBP27.74■■■□□ 2.03
VEGFC-202ENST00000618562 PGK2P07205 417 aa27.74■■■□□ 2.03
VEGFC-202ENST00000618562 PSAPP07602 524 aa27.74■■■□□ 2.03
VEGFC-202ENST00000618562 RHOXF2BP0C7M4 288 aa27.74■■■□□ 2.03
VEGFC-202ENST00000618562 KIF11P52732 1056 aa27.74■■■□□ 2.03
VEGFC-202ENST00000618562 NPEPPSP55786 919 aa27.74■■■□□ 2.03
VEGFC-202ENST00000618562 WDR93Q6P2C0 686 aa27.74■■■□□ 2.03
VEGFC-202ENST00000618562 ABHD15Q6UXT9 468 aa27.74■■■□□ 2.03
VEGFC-202ENST00000618562 RHOXF2Q9BQY4 288 aa27.74■■■□□ 2.03
VEGFC-202ENST00000618562 IFIH1Q9BYX4 1025 aaKnown RBP27.74■■■□□ 2.03
VEGFC-202ENST00000618562 NUCKS1Q9H1E3 243 aaKnown RBP27.74■■■□□ 2.03
VEGFC-202ENST00000618562 HDAC6Q9UBN7 1215 aa27.74■■■□□ 2.03
VEGFC-202ENST00000618562 LRRC53A6NM62 1247 aa27.74■■■□□ 2.03
VEGFC-202ENST00000618562 CETN3O15182 167 aa27.74■■■□□ 2.03
VEGFC-202ENST00000618562 TGFB1I1O43294 461 aa27.74■■■□□ 2.03
VEGFC-202ENST00000618562 CALUO43852 315 aaPredicted RBP27.74■■■□□ 2.03
VEGFC-202ENST00000618562 STBD1O95210 358 aa27.74■■■□□ 2.03
VEGFC-202ENST00000618562 PLEKP08567 350 aaPredicted RBP27.74■■■□□ 2.03
VEGFC-202ENST00000618562 ERVK-9P63128 1117 aa27.74■■■□□ 2.03
VEGFC-202ENST00000618562 XKR9Q5GH70 373 aa27.74■■■□□ 2.03
VEGFC-202ENST00000618562 SWSAP1Q6NVH7 229 aa27.74■■■□□ 2.03
VEGFC-202ENST00000618562 HDXQ7Z353 690 aa27.74■■■□□ 2.03
VEGFC-202ENST00000618562 CCDC60Q8IWA6 550 aaPredicted RBP27.74■■■□□ 2.03
VEGFC-202ENST00000618562 TRIM58Q8NG06 486 aa27.74■■■□□ 2.03
VEGFC-202ENST00000618562 CCDC43Q96MW1 224 aaKnown RBP27.74■■■□□ 2.03
VEGFC-202ENST00000618562 IKZF4Q9H2S9 585 aa27.74■■■□□ 2.03
VEGFC-202ENST00000618562 PNMA3Q9UL41 463 aa27.74■■■□□ 2.03
VEGFC-202ENST00000618562 UBE4BO95155 1302 aa27.73■■■□□ 2.03
VEGFC-202ENST00000618562 MKRN3Q13064 507 aaKnown RBP27.73■■■□□ 2.03
VEGFC-202ENST00000618562 PDXDC1Q6P996 788 aa27.73■■■□□ 2.03
VEGFC-202ENST00000618562 RRAGAQ7L523 313 aa27.73■■■□□ 2.03
VEGFC-202ENST00000618562 KSR1Q8IVT5 923 aa27.73■■■□□ 2.03
VEGFC-202ENST00000618562 TRIM59Q8IWR1 403 aa27.73■■■□□ 2.03
VEGFC-202ENST00000618562 ATP6V0A1Q93050 837 aa27.73■■■□□ 2.03
VEGFC-202ENST00000618562 STRA6Q9BX79 667 aa27.73■■■□□ 2.03
VEGFC-202ENST00000618562 PCDHA13Q9Y5I0 950 aa27.73■■■□□ 2.03
VEGFC-202ENST00000618562 MYH9P35579 1960 aaKnown RBP27.73■■■□□ 2.03
VEGFC-202ENST00000618562 DNAJC25-GNG10A0A024R161 153 aa27.72■■■□□ 2.03
VEGFC-202ENST00000618562 CETPP11597 493 aa27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms