RNA–Protein interactions for RNA: ENST00000617185.4

TP53-222, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-222ENST00000617185 DDX23Q9BUQ8 820 aaKnown RBP12.5□□□□□ -0.41
TP53-222ENST00000617185 ETNK1Q9HBU6 452 aa12.5□□□□□ -0.41
TP53-222ENST00000617185 MAGEC2Q9UBF1 373 aaPredicted RBP12.5□□□□□ -0.41
TP53-222ENST00000617185 PNMA3Q9UL41 463 aa12.5□□□□□ -0.41
TP53-222ENST00000617185 UFL1O94874 794 aa12.49□□□□□ -0.41
TP53-222ENST00000617185 CYP11B2P19099 503 aa12.49□□□□□ -0.41
TP53-222ENST00000617185 MAGEA1P43355 309 aa12.49□□□□□ -0.41
TP53-222ENST00000617185 RASSF7Q02833 373 aa12.49□□□□□ -0.41
TP53-222ENST00000617185 SPDYCQ5MJ68 293 aa12.49□□□□□ -0.41
TP53-222ENST00000617185 ZNF658Q5TYW1 1059 aaPredicted RBP12.49□□□□□ -0.41
TP53-222ENST00000617185 CCNJLQ8IV13 435 aa12.49□□□□□ -0.41
TP53-222ENST00000617185 USP38Q8NB14 1042 aa12.49□□□□□ -0.41
TP53-222ENST00000617185 STKLD1Q8NE28 680 aa12.49□□□□□ -0.41
TP53-222ENST00000617185 TGFBRAP1Q8WUH2 860 aa12.49□□□□□ -0.41
TP53-222ENST00000617185 EPSTI1Q96J88 318 aa12.49□□□□□ -0.41
TP53-222ENST00000617185 PCMTD1Q96MG8 357 aaPredicted RBP12.49□□□□□ -0.41
TP53-222ENST00000617185 SPATA16Q9BXB7 569 aa12.49□□□□□ -0.41
TP53-222ENST00000617185 MTFR1LQ9H019 292 aa12.49□□□□□ -0.41
TP53-222ENST00000617185 MIS12Q9H081 205 aa12.49□□□□□ -0.41
TP53-222ENST00000617185 ADAM7Q9H2U9 754 aa12.49□□□□□ -0.41
TP53-222ENST00000617185 FAM114A2Q9NRY5 505 aa12.49□□□□□ -0.41
TP53-222ENST00000617185 ARL2BPQ9Y2Y0 163 aa12.49□□□□□ -0.41
TP53-222ENST00000617185 TSPY2A6NKD2 308 aa12.49□□□□□ -0.41
TP53-222ENST00000617185 AKR1B10O60218 316 aa12.49□□□□□ -0.41
TP53-222ENST00000617185 TJP3O95049 919 aa12.49□□□□□ -0.41
TP53-222ENST00000617185 UNC5CO95185 931 aa12.49□□□□□ -0.41
TP53-222ENST00000617185 GJB6O95452 261 aa12.49□□□□□ -0.41
TP53-222ENST00000617185 SERPINB2P05120 415 aa12.49□□□□□ -0.41
TP53-222ENST00000617185 PLEKP08567 350 aaPredicted RBP12.49□□□□□ -0.41
TP53-222ENST00000617185 GYS1P13807 737 aa12.49□□□□□ -0.41
TP53-222ENST00000617185 HNRNPH3P31942 346 aaKnown RBP12.49□□□□□ -0.41
TP53-222ENST00000617185 CCDC92Q53HC0 331 aaPredicted RBP12.49□□□□□ -0.41
TP53-222ENST00000617185 FIGNQ5HY92 759 aa12.49□□□□□ -0.41
TP53-222ENST00000617185 TYW1BQ6NUM6 668 aa12.49□□□□□ -0.41
TP53-222ENST00000617185 MAPKAPK5Q8IW41 473 aa12.49□□□□□ -0.41
TP53-222ENST00000617185 FITM2Q8N6M3 262 aa12.49□□□□□ -0.41
TP53-222ENST00000617185 PROCA1Q8NCQ7 364 aaPredicted RBP12.49□□□□□ -0.41
TP53-222ENST00000617185 CFAP61Q8NHU2 1237 aa12.49□□□□□ -0.41
TP53-222ENST00000617185 UTP4Q969X6 686 aaKnown RBP12.49□□□□□ -0.41
TP53-222ENST00000617185 FERMT2Q96AC1 680 aa12.49□□□□□ -0.41
TP53-222ENST00000617185 MTMR8Q96EF0 704 aa12.49□□□□□ -0.41
TP53-222ENST00000617185 PGM2Q96G03 612 aa12.49□□□□□ -0.41
TP53-222ENST00000617185 INPP4AQ96PE3 977 aaPredicted RBP12.49□□□□□ -0.41
TP53-222ENST00000617185 FOXP1Q9H334 677 aaPredicted RBP12.49□□□□□ -0.41
TP53-222ENST00000617185 CPVLQ9H3G5 476 aa12.49□□□□□ -0.41
TP53-222ENST00000617185 SALL4Q9UJQ4 1053 aa12.49□□□□□ -0.41
TP53-222ENST00000617185 TMEM59LQ9UK28 342 aa12.49□□□□□ -0.41
TP53-222ENST00000617185 PLAGL2Q9UPG8 496 aa12.49□□□□□ -0.41
TP53-222ENST00000617185 LMNAP02545 664 aaKnown RBP12.48□□□□□ -0.41
TP53-222ENST00000617185 MMP1P03956 469 aa12.48□□□□□ -0.41
TP53-222ENST00000617185 ZFXP17010 805 aaPredicted RBP12.48□□□□□ -0.41
TP53-222ENST00000617185 GRAPQ13588 217 aa12.48□□□□□ -0.41
TP53-222ENST00000617185 DDX42Q86XP3 938 aaKnown RBP eCLIP12.48□□□□□ -0.41
TP53-222ENST00000617185 AGGF1Q8N302 714 aaeCLIP12.48□□□□□ -0.41
TP53-222ENST00000617185 GRAPLQ8TC17 118 aaPredicted RBP12.48□□□□□ -0.41
TP53-222ENST00000617185 ANKRD2Q9GZV1 360 aa12.48□□□□□ -0.41
TP53-222ENST00000617185 NEUROG2Q9H2A3 272 aa12.48□□□□□ -0.41
TP53-222ENST00000617185 TXLNGQ9NUQ3 528 aa12.48□□□□□ -0.41
TP53-222ENST00000617185 LARSQ9P2J5 1176 aaKnown RBP12.48□□□□□ -0.41
TP53-222ENST00000617185 STOML1Q9UBI4 398 aa12.48□□□□□ -0.41
TP53-222ENST00000617185 MROH7Q68CQ1 1323 aa12.48□□□□□ -0.41
TP53-222ENST00000617185 USP17L3A6NCW0 530 aa12.48□□□□□ -0.41
TP53-222ENST00000617185 USP17L4A6NCW7 530 aa12.48□□□□□ -0.41
TP53-222ENST00000617185 BHMG1C9JSJ3 638 aaPredicted RBP12.48□□□□□ -0.41
TP53-222ENST00000617185 LDHBP07195 334 aaKnown RBP12.48□□□□□ -0.41
TP53-222ENST00000617185 RXRBP28702 533 aa12.48□□□□□ -0.41
TP53-222ENST00000617185 FLT3P36888 993 aa12.48□□□□□ -0.41
TP53-222ENST00000617185 VHLP40337 213 aa12.48□□□□□ -0.41
TP53-222ENST00000617185 DHX9Q08211 1270 aaKnown RBP12.48□□□□□ -0.41
TP53-222ENST00000617185 WASHC2DQ5SRD0 308 aa12.48□□□□□ -0.41
TP53-222ENST00000617185 USP17L1Q7RTZ2 530 aa12.48□□□□□ -0.41
TP53-222ENST00000617185 TBC1D16Q8TBP0 767 aa12.48□□□□□ -0.41
TP53-222ENST00000617185 WASF1Q92558 559 aa12.48□□□□□ -0.41
TP53-222ENST00000617185 ZNF653Q96CK0 615 aa12.48□□□□□ -0.41
TP53-222ENST00000617185 CCDC28BQ9BUN5 200 aa12.48□□□□□ -0.41
TP53-222ENST00000617185 CRNKL1Q9BZJ0 848 aaKnown RBP12.48□□□□□ -0.41
TP53-222ENST00000617185 NMRK1Q9NWW6 199 aa12.48□□□□□ -0.41
TP53-222ENST00000617185 ARHGAP20Q9P2F6 1191 aa12.48□□□□□ -0.41
TP53-222ENST00000617185 INTUQ9ULD6 942 aa12.48□□□□□ -0.41
TP53-222ENST00000617185 BARX2Q9UMQ3 279 aaPredicted RBP12.48□□□□□ -0.41
TP53-222ENST00000617185 MYH1P12882 1939 aa12.48□□□□□ -0.41
TP53-222ENST00000617185 C6orf229H3BNL8 230 aa12.47□□□□□ -0.41
TP53-222ENST00000617185 HNRNPRO43390 633 aaKnown RBP12.47□□□□□ -0.41
TP53-222ENST00000617185 PRPF3O43395 683 aaKnown RBP12.47□□□□□ -0.41
TP53-222ENST00000617185 BUB1O43683 1085 aa12.47□□□□□ -0.41
TP53-222ENST00000617185 ATP9AO75110 1047 aa12.47□□□□□ -0.41
TP53-222ENST00000617185 ATP5HO75947 161 aa12.47□□□□□ -0.41
TP53-222ENST00000617185 EIF4A3P38919 411 aaKnown RBP12.47□□□□□ -0.41
TP53-222ENST00000617185 KBTBD12Q3ZCT8 623 aa12.47□□□□□ -0.41
TP53-222ENST00000617185 EXOC3L1Q86VI1 746 aa12.47□□□□□ -0.41
TP53-222ENST00000617185 SYMPKQ92797 1274 aaKnown RBP12.47□□□□□ -0.41
TP53-222ENST00000617185 GATA6Q92908 595 aa12.47□□□□□ -0.41
TP53-222ENST00000617185 DCLRE1BQ9H816 532 aa12.47□□□□□ -0.41
TP53-222ENST00000617185 GNA14O95837 355 aa12.47□□□□□ -0.41
TP53-222ENST00000617185 SLURP2P0DP57 97 aa12.47□□□□□ -0.41
TP53-222ENST00000617185 IFNAR2P48551 515 aa12.47□□□□□ -0.41
TP53-222ENST00000617185 PHEXP78562 749 aa12.47□□□□□ -0.41
TP53-222ENST00000617185 KPNB1Q14974 876 aaKnown RBP12.47□□□□□ -0.41
TP53-222ENST00000617185 CATIPQ7Z7H3 387 aa12.47□□□□□ -0.41
TP53-222ENST00000617185 C2CD5Q86YS7 1000 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms