RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 ADAM22Q9P0K1 906 aa20.15■□□□□ 0.82
SPAST-203ENST00000615843 WARS2Q9UGM6 360 aaKnown RBP20.15■□□□□ 0.82
SPAST-203ENST00000615843 PNMA2Q9UL42 364 aa20.15■□□□□ 0.82
SPAST-203ENST00000615843 IGKV5-2P06315 115 aa20.14■□□□□ 0.82
SPAST-203ENST00000615843 PGM1P36871 562 aa20.14■□□□□ 0.82
SPAST-203ENST00000615843 ATP2C1P98194 919 aaPredicted RBP20.14■□□□□ 0.82
SPAST-203ENST00000615843 EXOSC10Q01780 885 aaKnown RBP20.14■□□□□ 0.82
SPAST-203ENST00000615843 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.14■□□□□ 0.82
SPAST-203ENST00000615843 OR2W6PQ8NHA6 318 aa20.14■□□□□ 0.82
SPAST-203ENST00000615843 PP2D1A8MPX8 630 aa20.14■□□□□ 0.81
SPAST-203ENST00000615843 GGPS1O95749 300 aa20.14■□□□□ 0.81
SPAST-203ENST00000615843 KCNB1Q14721 858 aa20.14■□□□□ 0.81
SPAST-203ENST00000615843 KRT39Q6A163 491 aa20.14■□□□□ 0.81
SPAST-203ENST00000615843 BRIP1Q9BX63 1249 aa20.14■□□□□ 0.81
SPAST-203ENST00000615843 LPXNO60711 386 aa20.14■□□□□ 0.81
SPAST-203ENST00000615843 CD58P19256 250 aa20.14■□□□□ 0.81
SPAST-203ENST00000615843 OCRLQ01968 901 aa20.14■□□□□ 0.81
SPAST-203ENST00000615843 CTTNQ14247 550 aaKnown RBP20.14■□□□□ 0.81
SPAST-203ENST00000615843 TBC1D9BQ66K14 1250 aa20.14■□□□□ 0.81
SPAST-203ENST00000615843 PNKPQ96T60 521 aa20.14■□□□□ 0.81
SPAST-203ENST00000615843 PNMA6FA0A0J9YX94 578 aa20.14■□□□□ 0.81
SPAST-203ENST00000615843 PCYT1AP49585 367 aa20.14■□□□□ 0.81
SPAST-203ENST00000615843 TMEM154Q6P9G4 183 aa20.14■□□□□ 0.81
SPAST-203ENST00000615843 NUP85Q9BW27 656 aa20.14■□□□□ 0.81
SPAST-203ENST00000615843 REREQ9P2R6 1566 aa20.14■□□□□ 0.81
SPAST-203ENST00000615843 TMC4Q7Z404 712 aa20.13■□□□□ 0.81
SPAST-203ENST00000615843 FAM149B1Q96BN6 582 aa20.13■□□□□ 0.81
SPAST-203ENST00000615843 MTA3Q9BTC8 594 aa20.13■□□□□ 0.81
SPAST-203ENST00000615843 KLC2Q9H0B6 622 aa20.13■□□□□ 0.81
SPAST-203ENST00000615843 WNT8AQ9H1J5 351 aa20.13■□□□□ 0.81
SPAST-203ENST00000615843 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.13■□□□□ 0.81
SPAST-203ENST00000615843 CCDC195A0A1B0GUA6 201 aa20.13■□□□□ 0.81
SPAST-203ENST00000615843 CCT8L1PA6NM43 557 aa20.13■□□□□ 0.81
SPAST-203ENST00000615843 THOC5Q13769 683 aaKnown RBP20.13■□□□□ 0.81
SPAST-203ENST00000615843 DRAP1Q14919 205 aaPredicted RBP20.13■□□□□ 0.81
SPAST-203ENST00000615843 ANKRD40Q6AI12 368 aa20.13■□□□□ 0.81
SPAST-203ENST00000615843 RASSF3Q86WH2 238 aa20.13■□□□□ 0.81
SPAST-203ENST00000615843 ANO3Q9BYT9 981 aa20.13■□□□□ 0.81
SPAST-203ENST00000615843 SRGNP10124 158 aa20.13■□□□□ 0.81
SPAST-203ENST00000615843 KIAA1755Q5JYT7 1200 aa20.13■□□□□ 0.81
SPAST-203ENST00000615843 LONP2Q86WA8 852 aa20.13■□□□□ 0.81
SPAST-203ENST00000615843 TMEM2Q9UHN6 1383 aa20.13■□□□□ 0.81
SPAST-203ENST00000615843 CCDC22O60826 627 aa20.13■□□□□ 0.81
SPAST-203ENST00000615843 PSMA2P25787 234 aa20.13■□□□□ 0.81
SPAST-203ENST00000615843 OR6B2Q6IFH4 312 aa20.13■□□□□ 0.81
SPAST-203ENST00000615843 SPICE1Q8N0Z3 855 aa20.13■□□□□ 0.81
SPAST-203ENST00000615843 TTC13Q8NBP0 860 aa20.13■□□□□ 0.81
SPAST-203ENST00000615843 SUPT20HQ8NEM7 779 aa20.13■□□□□ 0.81
SPAST-203ENST00000615843 DTX3LQ8TDB6 740 aa20.13■□□□□ 0.81
SPAST-203ENST00000615843 BTBD6Q96KE9 485 aa20.13■□□□□ 0.81
SPAST-203ENST00000615843 CYP4F11Q9HBI6 524 aa20.13■□□□□ 0.81
SPAST-203ENST00000615843 SLC38A10Q9HBR0 1119 aa20.13■□□□□ 0.81
SPAST-203ENST00000615843 CFAP74Q9C0B2 1584 aa20.13■□□□□ 0.81
SPAST-203ENST00000615843 FTLP02792 175 aaPredicted RBP20.12■□□□□ 0.81
SPAST-203ENST00000615843 FCER1AP12319 257 aa20.12■□□□□ 0.81
SPAST-203ENST00000615843 HP1BP3Q5SSJ5 553 aaPredicted RBP20.12■□□□□ 0.81
SPAST-203ENST00000615843 NLRP10Q86W26 655 aa20.12■□□□□ 0.81
SPAST-203ENST00000615843 SGSM3Q96HU1 749 aa20.12■□□□□ 0.81
SPAST-203ENST00000615843 CEP170P1Q96L14 293 aa20.12■□□□□ 0.81
SPAST-203ENST00000615843 GEMIN8Q9NWZ8 242 aaKnown RBP20.12■□□□□ 0.81
SPAST-203ENST00000615843 USP6P35125 1406 aa20.12■□□□□ 0.81
SPAST-203ENST00000615843 E9PMD0 336 aa20.12■□□□□ 0.81
SPAST-203ENST00000615843 KCNA3P22001 575 aa20.12■□□□□ 0.81
SPAST-203ENST00000615843 GLYCTKQ8IVS8 523 aa20.12■□□□□ 0.81
SPAST-203ENST00000615843 ZBED8Q8IZ13 594 aa20.12■□□□□ 0.81
SPAST-203ENST00000615843 MMGT1Q8N4V1 131 aa20.12■□□□□ 0.81
SPAST-203ENST00000615843 ENAHQ8N8S7 591 aaPredicted RBP20.12■□□□□ 0.81
SPAST-203ENST00000615843 NXF1Q9UBU9 619 aaKnown RBP20.12■□□□□ 0.81
SPAST-203ENST00000615843 PDIA2Q13087 525 aaKnown RBP20.12■□□□□ 0.81
SPAST-203ENST00000615843 SLC12A1Q13621 1099 aa20.12■□□□□ 0.81
SPAST-203ENST00000615843 STAT4Q14765 748 aa20.12■□□□□ 0.81
SPAST-203ENST00000615843 SGMS1Q86VZ5 419 aa20.12■□□□□ 0.81
SPAST-203ENST00000615843 ERICH1Q86X53 443 aa20.12■□□□□ 0.81
SPAST-203ENST00000615843 ATP6V1E2Q96A05 226 aa20.12■□□□□ 0.81
SPAST-203ENST00000615843 CACYBPQ9HB71 228 aaKnown RBP20.12■□□□□ 0.81
SPAST-203ENST00000615843 SMARCAL1Q9NZC9 954 aa20.12■□□□□ 0.81
SPAST-203ENST00000615843 CARSP49589 748 aaKnown RBP20.12■□□□□ 0.81
SPAST-203ENST00000615843 TFAMQ00059 246 aaKnown RBP20.12■□□□□ 0.81
SPAST-203ENST00000615843 SLC7A3Q8WY07 619 aa20.12■□□□□ 0.81
SPAST-203ENST00000615843 NVLO15381 856 aaKnown RBP20.11■□□□□ 0.81
SPAST-203ENST00000615843 S100BP04271 92 aaPredicted RBP20.11■□□□□ 0.81
SPAST-203ENST00000615843 IZUMO3Q5VZ72 239 aa20.11■□□□□ 0.81
SPAST-203ENST00000615843 ACAD11Q709F0 780 aa20.11■□□□□ 0.81
SPAST-203ENST00000615843 DNAJC9Q8WXX5 260 aa20.11■□□□□ 0.81
SPAST-203ENST00000615843 AGPAT5Q9NUQ2 364 aa20.11■□□□□ 0.81
SPAST-203ENST00000615843 GYPCP04921 128 aa20.11■□□□□ 0.81
SPAST-203ENST00000615843 NT5C2P49902 561 aa20.11■□□□□ 0.81
SPAST-203ENST00000615843 KNOP1Q1ED39 458 aaKnown RBP20.11■□□□□ 0.81
SPAST-203ENST00000615843 RABGAP1LQ5R372 815 aa20.11■□□□□ 0.81
SPAST-203ENST00000615843 TEDDM1Q5T9Z0 273 aa20.11■□□□□ 0.81
SPAST-203ENST00000615843 CYB5D1Q6P9G0 228 aa20.11■□□□□ 0.81
SPAST-203ENST00000615843 RNF25Q96BH1 459 aaPredicted RBP20.11■□□□□ 0.81
SPAST-203ENST00000615843 TRIM51Q9BSJ1 452 aa20.11■□□□□ 0.81
SPAST-203ENST00000615843 NOD2Q9HC29 1040 aa20.11■□□□□ 0.81
SPAST-203ENST00000615843 KIAA0825Q8IV33 1275 aa20.11■□□□□ 0.81
SPAST-203ENST00000615843 PPM1NQ8N819 430 aa20.11■□□□□ 0.81
SPAST-203ENST00000615843 C1orf54Q8WWF1 131 aa20.11■□□□□ 0.81
SPAST-203ENST00000615843 HSPH1Q92598 858 aa20.11■□□□□ 0.81
SPAST-203ENST00000615843 SPC25Q9HBM1 224 aa20.11■□□□□ 0.81
SPAST-203ENST00000615843 SENP1Q9P0U3 644 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms