RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 HINFPQ9BQA5 517 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 GTPBP4Q9BZE4 634 aaKnown RBP3.76□□□□□ -1.81
LIG4-205ENST00000614526 KMT5AQ9NQR1 393 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 ZNF302Q9NR11 478 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 OLFML3Q9NRN5 406 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 MAP3K20Q9NYL2 800 aaKnown RBP3.76□□□□□ -1.81
LIG4-205ENST00000614526 GCNT4Q9P109 453 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 HDAC6Q9UBN7 1215 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 AJAP1Q9UKB5 411 aaPredicted RBP3.76□□□□□ -1.81
LIG4-205ENST00000614526 TRAF3IP3Q9Y228 551 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 FRMD4BQ9Y2L6 1034 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 FHOD1Q9Y613 1164 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 LRRIQ4A6NIV6 560 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 TMCO5BA8MYB1 307 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 BTBD19C9JJ37 291 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 NOP56O00567 594 aaKnown RBP3.76□□□□□ -1.81
LIG4-205ENST00000614526 ATP2A1O14983 1001 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 CCP110O43303 1012 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 BUB1O43683 1085 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 TLR2O60603 784 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 SRGAP2O75044 1071 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 PLS3P13797 630 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 OSBPP22059 807 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 GUCY2CP25092 1073 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 HOXA7P31268 230 aaPredicted RBP3.76□□□□□ -1.81
LIG4-205ENST00000614526 SFNP31947 248 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 PSMC2P35998 433 aaKnown RBP3.76□□□□□ -1.81
LIG4-205ENST00000614526 TCF7P36402 384 aaPredicted RBP3.76□□□□□ -1.81
LIG4-205ENST00000614526 USP8P40818 1118 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 MATR3P43243 847 aaKnown RBP eCLIP3.76□□□□□ -1.81
LIG4-205ENST00000614526 POLGP54098 1239 aaPredicted RBP3.76□□□□□ -1.81
LIG4-205ENST00000614526 ERVK-9P63128 1117 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 GHRHRQ02643 423 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 PPIL2Q13356 520 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 SNAPC2Q13487 334 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 MOGSQ13724 837 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 ELF2Q15723 593 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 KCTD19Q17RG1 926 aaPredicted RBP3.76□□□□□ -1.81
LIG4-205ENST00000614526 EDRF1Q3B7T1 1238 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 ZNF746Q6NUN9 644 aaPredicted RBP3.76□□□□□ -1.81
LIG4-205ENST00000614526 ABHD15Q6UXT9 468 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 OTUD6AQ7L8S5 288 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 CDR2LQ86X02 465 aaPredicted RBP3.76□□□□□ -1.81
LIG4-205ENST00000614526 CBWD2Q8IUF1 395 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 LRRC71Q8N4P6 559 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 PROCA1Q8NCQ7 364 aaPredicted RBP3.76□□□□□ -1.81
LIG4-205ENST00000614526 ZC3H15Q8WU90 426 aaKnown RBP3.76□□□□□ -1.81
LIG4-205ENST00000614526 BAP1Q92560 729 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 ATP6V0A1Q93050 837 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 SLC35C1Q96A29 364 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 CCDC51Q96ER9 411 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 NUP58Q9BVL2 599 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 NAA15Q9BXJ9 866 aaKnown RBP3.76□□□□□ -1.81
LIG4-205ENST00000614526 ADAMTS1Q9UHI8 967 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 ODF2LQ9ULJ1 636 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 COL11A1P12107 1806 aaPredicted RBP3.76□□□□□ -1.81
LIG4-205ENST00000614526 ADGRA3Q8IWK6 1321 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 GSTTP1A0A1W2PQM5 241 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 GRIN3BO60391 1043 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 GNA14O95837 355 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 SUPT20HL2P0C7V6 817 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 SRGAP2CP0DJJ0 459 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 DLATP10515 647 aaKnown RBP3.76□□□□□ -1.81
LIG4-205ENST00000614526 PON1P27169 355 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 ARHGAP25P42331 645 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 KIF11P52732 1056 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 ZNF131P52739 623 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 DMP1Q13316 513 aaPredicted RBP3.76□□□□□ -1.81
LIG4-205ENST00000614526 SPA17Q15506 151 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 SFMBT2Q5VUG0 894 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 MIS18BP1Q6P0N0 1132 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 FASTKD5Q7L8L6 764 aaKnown RBP3.76□□□□□ -1.81
LIG4-205ENST00000614526 PNMA8AQ86V59 439 aaPredicted RBP3.76□□□□□ -1.81
LIG4-205ENST00000614526 ZNF710Q8N1W2 664 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 MNS1Q8NEH6 495 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 NEK9Q8TD19 979 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 BRI3BPQ8WY22 251 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 JAKMIP2Q96AA8 810 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 ZBTB45Q96K62 511 aaPredicted RBP3.76□□□□□ -1.81
LIG4-205ENST00000614526 CAPZA3Q96KX2 299 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 POLR3FQ9H1D9 316 aaPredicted RBP3.76□□□□□ -1.81
LIG4-205ENST00000614526 GBA2Q9HCG7 927 aaPredicted RBP3.76□□□□□ -1.81
LIG4-205ENST00000614526 XPNPEP1Q9NQW7 623 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 CYP26B1Q9NR63 512 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 TOPORSQ9NS56 1045 aaPredicted RBP3.76□□□□□ -1.81
LIG4-205ENST00000614526 SEPT11Q9NVA2 429 aaKnown RBP3.76□□□□□ -1.81
LIG4-205ENST00000614526 DOCK1Q14185 1865 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 PFASO15067 1338 aa3.76□□□□□ -1.81
LIG4-205ENST00000614526 HNRNPDLO14979 420 aaKnown RBP3.75□□□□□ -1.81
LIG4-205ENST00000614526 GFPT2O94808 682 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 FARP2O94887 1054 aaPredicted RBP3.75□□□□□ -1.81
LIG4-205ENST00000614526 SLU7O95391 586 aaKnown RBP3.75□□□□□ -1.81
LIG4-205ENST00000614526 CALCAP01258 141 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 TXNP10599 105 aaKnown RBP3.75□□□□□ -1.81
LIG4-205ENST00000614526 UCHL3P15374 230 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 CNGA1P29973 690 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 CYLC1P35663 651 aaPredicted RBP3.75□□□□□ -1.81
LIG4-205ENST00000614526 KCNJ6P48051 423 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 ACOT2P49753 483 aa3.75□□□□□ -1.81
LIG4-205ENST00000614526 STAT5BP51692 787 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms