RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 TNS4Q8IZW8 715 aa16.29■□□□□ 0.2
CD48-203ENST00000613788 NME8Q8N427 588 aa16.29■□□□□ 0.2
CD48-203ENST00000613788 PSPC1Q8WXF1 523 aaKnown RBP16.29■□□□□ 0.2
CD48-203ENST00000613788 SMARCE1Q969G3 411 aa16.29■□□□□ 0.2
CD48-203ENST00000613788 TMEM143Q96AN5 459 aa16.29■□□□□ 0.2
CD48-203ENST00000613788 ZHX3Q9H4I2 956 aa16.29■□□□□ 0.2
CD48-203ENST00000613788 C17orf75Q9HAS0 396 aa16.29■□□□□ 0.2
CD48-203ENST00000613788 PANK4Q9NVE7 773 aa16.29■□□□□ 0.2
CD48-203ENST00000613788 LARSQ9P2J5 1176 aaKnown RBP16.29■□□□□ 0.2
CD48-203ENST00000613788 PRR29P0C7W0 189 aa16.28■□□□□ 0.2
CD48-203ENST00000613788 GAP43P17677 238 aa16.28■□□□□ 0.2
CD48-203ENST00000613788 CASP1P29466 404 aa16.28■□□□□ 0.2
CD48-203ENST00000613788 ARL2P36404 184 aa16.28■□□□□ 0.2
CD48-203ENST00000613788 CLCN3P51790 818 aa16.28■□□□□ 0.2
CD48-203ENST00000613788 RTP1P59025 263 aa16.28■□□□□ 0.2
CD48-203ENST00000613788 CACNB1Q02641 598 aaPredicted RBP16.28■□□□□ 0.2
CD48-203ENST00000613788 PTK7Q13308 1070 aa16.28■□□□□ 0.2
CD48-203ENST00000613788 SNX17Q15036 470 aa16.28■□□□□ 0.2
CD48-203ENST00000613788 UNC13DQ70J99 1090 aa16.28■□□□□ 0.2
CD48-203ENST00000613788 RSPH3Q86UC2 560 aa16.28■□□□□ 0.2
CD48-203ENST00000613788 SERINC5Q86VE9 423 aa16.28■□□□□ 0.2
CD48-203ENST00000613788 KIAA0319LQ8IZA0 1049 aa16.28■□□□□ 0.2
CD48-203ENST00000613788 ZNF710Q8N1W2 664 aa16.28■□□□□ 0.2
CD48-203ENST00000613788 LINC01465Q8N7H1 131 aa16.28■□□□□ 0.2
CD48-203ENST00000613788 PRPF31Q8WWY3 499 aaKnown RBP16.28■□□□□ 0.2
CD48-203ENST00000613788 ZBTB10Q96DT7 871 aa16.28■□□□□ 0.2
CD48-203ENST00000613788 IFT74Q96LB3 600 aa16.28■□□□□ 0.2
CD48-203ENST00000613788 GSDMAQ96QA5 445 aa16.28■□□□□ 0.2
CD48-203ENST00000613788 POLR3FQ9H1D9 316 aaPredicted RBP16.28■□□□□ 0.2
CD48-203ENST00000613788 PARVGQ9HBI0 331 aa16.28■□□□□ 0.2
CD48-203ENST00000613788 GPRC5CQ9NQ84 441 aa16.28■□□□□ 0.2
CD48-203ENST00000613788 TRMT13Q9NUP7 481 aaKnown RBP16.28■□□□□ 0.2
CD48-203ENST00000613788 SFI1A8K8P3 1242 aa16.27■□□□□ 0.2
CD48-203ENST00000613788 DCDC2CA8MYV0 355 aa16.27■□□□□ 0.2
CD48-203ENST00000613788 B4GALT4O60513 344 aa16.27■□□□□ 0.2
CD48-203ENST00000613788 RPN1P04843 607 aaKnown RBP16.27■□□□□ 0.2
CD48-203ENST00000613788 ZNF131P52739 623 aa16.27■□□□□ 0.2
CD48-203ENST00000613788 SOX10P56693 466 aa16.27■□□□□ 0.2
CD48-203ENST00000613788 MAPK7Q13164 816 aa16.27■□□□□ 0.2
CD48-203ENST00000613788 MKRN4PQ13434 485 aaPredicted RBP16.27■□□□□ 0.2
CD48-203ENST00000613788 PPP2R5AQ15172 486 aa16.27■□□□□ 0.2
CD48-203ENST00000613788 ANKRD33Q7Z3H0 272 aa16.27■□□□□ 0.2
CD48-203ENST00000613788 DAW1Q8N136 415 aa16.27■□□□□ 0.2
CD48-203ENST00000613788 MYCT1Q8N699 235 aa16.27■□□□□ 0.2
CD48-203ENST00000613788 TOX2Q96NM4 488 aa16.27■□□□□ 0.2
CD48-203ENST00000613788 FAM49AQ9H0Q0 323 aaPredicted RBP16.27■□□□□ 0.2
CD48-203ENST00000613788 TRPV6Q9H1D0 765 aa16.27■□□□□ 0.2
CD48-203ENST00000613788 POLD4Q9HCU8 107 aa16.27■□□□□ 0.2
CD48-203ENST00000613788 RMND1Q9NWS8 449 aa16.27■□□□□ 0.2
CD48-203ENST00000613788 KIAA1468Q9P260 1216 aa16.27■□□□□ 0.2
CD48-203ENST00000613788 SEL1LQ9UBV2 794 aa16.27■□□□□ 0.2
CD48-203ENST00000613788 AKT3Q9Y243 479 aa16.27■□□□□ 0.2
CD48-203ENST00000613788 PCDHA5Q9Y5H7 936 aa16.27■□□□□ 0.2
CD48-203ENST00000613788 FRMD3A2A2Y4 597 aa16.26■□□□□ 0.19
CD48-203ENST00000613788 CCDC85CA6NKD9 419 aa16.26■□□□□ 0.19
CD48-203ENST00000613788 RSPH10B2B2RC85 870 aa16.26■□□□□ 0.19
CD48-203ENST00000613788 LETM1O95202 739 aaPredicted RBP16.26■□□□□ 0.19
CD48-203ENST00000613788 RSPH10BP0C881 870 aa16.26■□□□□ 0.19
CD48-203ENST00000613788 PLS3P13797 630 aa16.26■□□□□ 0.19
CD48-203ENST00000613788 DRP2Q13474 957 aa16.26■□□□□ 0.19
CD48-203ENST00000613788 HERC4Q5GLZ8 1057 aaPredicted RBP16.26■□□□□ 0.19
CD48-203ENST00000613788 RUFY4Q6ZNE9 571 aa16.26■□□□□ 0.19
CD48-203ENST00000613788 UBE2Q1Q7Z7E8 422 aa16.26■□□□□ 0.19
CD48-203ENST00000613788 RPAINQ86UA6 219 aa16.26■□□□□ 0.19
CD48-203ENST00000613788 FAM126BQ8IXS8 530 aa16.26■□□□□ 0.19
CD48-203ENST00000613788 SPATA20Q8TB22 786 aa16.26■□□□□ 0.19
CD48-203ENST00000613788 DNAJB3Q8WWF6 145 aa16.26■□□□□ 0.19
CD48-203ENST00000613788 EXOC1Q9NV70 894 aa16.26■□□□□ 0.19
CD48-203ENST00000613788 TMEM63CQ9P1W3 806 aa16.26■□□□□ 0.19
CD48-203ENST00000613788 KAT6AQ92794 2004 aa16.26■□□□□ 0.19
CD48-203ENST00000613788 KIAA0100Q14667 2235 aaKnown RBP16.26■□□□□ 0.19
CD48-203ENST00000613788 PQBP1O60828 265 aaKnown RBP16.25■□□□□ 0.19
CD48-203ENST00000613788 CD4P01730 458 aa16.25■□□□□ 0.19
CD48-203ENST00000613788 GLRA2P23416 452 aa16.25■□□□□ 0.19
CD48-203ENST00000613788 SARSP49591 514 aaKnown RBP16.25■□□□□ 0.19
CD48-203ENST00000613788 SMTNP53814 917 aa16.25■□□□□ 0.19
CD48-203ENST00000613788 PEX3P56589 373 aa16.25■□□□□ 0.19
CD48-203ENST00000613788 LAMTOR4Q0VGL1 99 aa16.25■□□□□ 0.19
CD48-203ENST00000613788 PSMD2Q13200 908 aa16.25■□□□□ 0.19
CD48-203ENST00000613788 DMP1Q13316 513 aaPredicted RBP16.25■□□□□ 0.19
CD48-203ENST00000613788 TFDP1Q14186 410 aa16.25■□□□□ 0.19
CD48-203ENST00000613788 KCNB1Q14721 858 aa16.25■□□□□ 0.19
CD48-203ENST00000613788 KMT5BQ4FZB7 885 aa16.25■□□□□ 0.19
CD48-203ENST00000613788 ODR4Q5SWX8 454 aa16.25■□□□□ 0.19
CD48-203ENST00000613788 NT5DC1Q5TFE4 455 aa16.25■□□□□ 0.19
CD48-203ENST00000613788 RHPN2Q8IUC4 686 aa16.25■□□□□ 0.19
CD48-203ENST00000613788 SLC17A8Q8NDX2 589 aa16.25■□□□□ 0.19
CD48-203ENST00000613788 GTPBP4Q9BZE4 634 aaKnown RBP16.25■□□□□ 0.19
CD48-203ENST00000613788 ARID2Q68CP9 1835 aa16.25■□□□□ 0.19
CD48-203ENST00000613788 M0QZ92 97 aa16.24■□□□□ 0.19
CD48-203ENST00000613788 KLRC4O43908 158 aa16.24■□□□□ 0.19
CD48-203ENST00000613788 CAND2O75155 1236 aa16.24■□□□□ 0.19
CD48-203ENST00000613788 NAMPTP43490 491 aa16.24■□□□□ 0.19
CD48-203ENST00000613788 TLE2Q04725 743 aa16.24■□□□□ 0.19
CD48-203ENST00000613788 POU5F1BQ06416 359 aa16.24■□□□□ 0.19
CD48-203ENST00000613788 COASYQ13057 564 aa16.24■□□□□ 0.19
CD48-203ENST00000613788 TRIM60Q495X7 471 aa16.24■□□□□ 0.19
CD48-203ENST00000613788 CCDC155Q8N6L0 562 aa16.24■□□□□ 0.19
CD48-203ENST00000613788 ASAP3Q8TDY4 903 aa16.24■□□□□ 0.19
CD48-203ENST00000613788 SPIRE2Q8WWL2 714 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms