RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 KLK7P49862 253 aa23.89■■□□□ 1.41
POLR2J3-220ENST00000613744 PPP2R2AP63151 447 aa23.89■■□□□ 1.41
POLR2J3-220ENST00000613744 MRPS25P82663 173 aaKnown RBP23.89■■□□□ 1.41
POLR2J3-220ENST00000613744 MOGSQ13724 837 aa23.89■■□□□ 1.41
POLR2J3-220ENST00000613744 CCL15Q16663 113 aa23.89■■□□□ 1.41
POLR2J3-220ENST00000613744 DEFB115Q30KQ5 88 aa23.89■■□□□ 1.41
POLR2J3-220ENST00000613744 ASPRV1Q53RT3 343 aa23.89■■□□□ 1.41
POLR2J3-220ENST00000613744 RASSF8Q8NHQ8 419 aa23.89■■□□□ 1.41
POLR2J3-220ENST00000613744 CCT6BQ92526 530 aa23.89■■□□□ 1.41
POLR2J3-220ENST00000613744 EBF2Q9HAK2 575 aa23.89■■□□□ 1.41
POLR2J3-220ENST00000613744 KBTBD4Q9NVX7 518 aa23.89■■□□□ 1.41
POLR2J3-220ENST00000613744 H0YGN5 161 aa23.88■■□□□ 1.41
POLR2J3-220ENST00000613744 WDR46O15213 610 aaKnown RBP23.88■■□□□ 1.41
POLR2J3-220ENST00000613744 CYTH3O43739 400 aa23.88■■□□□ 1.41
POLR2J3-220ENST00000613744 GTF2A2P52657 109 aa23.88■■□□□ 1.41
POLR2J3-220ENST00000613744 C12orf42Q96LP6 360 aa23.88■■□□□ 1.41
POLR2J3-220ENST00000613744 SMARCAL1Q9NZC9 954 aa23.88■■□□□ 1.41
POLR2J3-220ENST00000613744 NFS1Q9Y697 457 aa23.88■■□□□ 1.41
POLR2J3-220ENST00000613744 GUCY2FP51841 1108 aa23.88■■□□□ 1.41
POLR2J3-220ENST00000613744 GPATCH4Q5T3I0 446 aaKnown RBP23.88■■□□□ 1.41
POLR2J3-220ENST00000613744 BRI3BPQ8WY22 251 aa23.88■■□□□ 1.41
POLR2J3-220ENST00000613744 CENPTQ96BT3 561 aa23.88■■□□□ 1.41
POLR2J3-220ENST00000613744 CNOT10Q9H9A5 744 aaKnown RBP23.88■■□□□ 1.41
POLR2J3-220ENST00000613744 EHD2Q9NZN4 543 aa23.88■■□□□ 1.41
POLR2J3-220ENST00000613744 FLOT1O75955 427 aa23.87■■□□□ 1.41
POLR2J3-220ENST00000613744 ATP6V1G2O95670 118 aa23.87■■□□□ 1.41
POLR2J3-220ENST00000613744 PLEKP08567 350 aaPredicted RBP23.87■■□□□ 1.41
POLR2J3-220ENST00000613744 ASTE1Q2TB18 679 aaPredicted RBP23.87■■□□□ 1.41
POLR2J3-220ENST00000613744 CUL5Q93034 780 aa23.87■■□□□ 1.41
POLR2J3-220ENST00000613744 HVCN1Q96D96 273 aa23.87■■□□□ 1.41
POLR2J3-220ENST00000613744 CCSER1Q9C0I3 900 aa23.87■■□□□ 1.41
POLR2J3-220ENST00000613744 SIK3Q9Y2K2 1263 aa23.87■■□□□ 1.41
POLR2J3-220ENST00000613744 STAT2P52630 851 aa23.87■■□□□ 1.41
POLR2J3-220ENST00000613744 BYSLQ13895 437 aaKnown RBP23.87■■□□□ 1.41
POLR2J3-220ENST00000613744 C4orf32Q8N8J7 132 aa23.87■■□□□ 1.41
POLR2J3-220ENST00000613744 LZTS2Q9BRK4 669 aa23.87■■□□□ 1.41
POLR2J3-220ENST00000613744 BHMG1C9JSJ3 638 aaPredicted RBP23.86■■□□□ 1.41
POLR2J3-220ENST00000613744 NCK2O43639 380 aa23.86■■□□□ 1.41
POLR2J3-220ENST00000613744 CETPP11597 493 aa23.86■■□□□ 1.41
POLR2J3-220ENST00000613744 HPDP32754 393 aaPredicted RBP23.86■■□□□ 1.41
POLR2J3-220ENST00000613744 ELF3P78545 371 aaPredicted RBP23.86■■□□□ 1.41
POLR2J3-220ENST00000613744 NAALADL2Q58DX5 795 aa23.86■■□□□ 1.41
POLR2J3-220ENST00000613744 ADGRF4Q8IZF3 695 aa23.86■■□□□ 1.41
POLR2J3-220ENST00000613744 INPP4AQ96PE3 977 aaPredicted RBP23.86■■□□□ 1.41
POLR2J3-220ENST00000613744 NUCKS1Q9H1E3 243 aaKnown RBP23.86■■□□□ 1.41
POLR2J3-220ENST00000613744 AOC2O75106 756 aa23.85■■□□□ 1.41
POLR2J3-220ENST00000613744 HOXA7P31268 230 aaPredicted RBP23.85■■□□□ 1.41
POLR2J3-220ENST00000613744 HSD17B3P37058 310 aa23.85■■□□□ 1.41
POLR2J3-220ENST00000613744 GPAT2Q6NUI2 795 aa23.85■■□□□ 1.41
POLR2J3-220ENST00000613744 EGFL6Q8IUX8 553 aa23.85■■□□□ 1.41
POLR2J3-220ENST00000613744 PROCA1Q8NCQ7 364 aaPredicted RBP23.85■■□□□ 1.41
POLR2J3-220ENST00000613744 PTPN18Q99952 460 aa23.85■■□□□ 1.41
POLR2J3-220ENST00000613744 NOD2Q9HC29 1040 aa23.85■■□□□ 1.41
POLR2J3-220ENST00000613744 TMEM59LQ9UK28 342 aa23.85■■□□□ 1.41
POLR2J3-220ENST00000613744 CFAP73A6NFT4 308 aa23.85■■□□□ 1.41
POLR2J3-220ENST00000613744 NAA25Q14CX7 972 aa23.85■■□□□ 1.41
POLR2J3-220ENST00000613744 FASTKD5Q7L8L6 764 aaKnown RBP23.85■■□□□ 1.41
POLR2J3-220ENST00000613744 ARMC2Q8NEN0 867 aa23.85■■□□□ 1.41
POLR2J3-220ENST00000613744 MTMR8Q96EF0 704 aa23.85■■□□□ 1.41
POLR2J3-220ENST00000613744 HHIPL1Q96JK4 782 aa23.85■■□□□ 1.41
POLR2J3-220ENST00000613744 CAPNS2Q96L46 248 aa23.85■■□□□ 1.41
POLR2J3-220ENST00000613744 PSMB7Q99436 277 aa23.85■■□□□ 1.41
POLR2J3-220ENST00000613744 KRT12Q99456 494 aa23.85■■□□□ 1.41
POLR2J3-220ENST00000613744 BCCIPQ9P287 314 aaKnown RBP eCLIP23.85■■□□□ 1.41
POLR2J3-220ENST00000613744 BTBD19C9JJ37 291 aa23.84■■□□□ 1.41
POLR2J3-220ENST00000613744 MCM7P33993 719 aa23.84■■□□□ 1.41
POLR2J3-220ENST00000613744 QPCTQ16769 361 aa23.84■■□□□ 1.41
POLR2J3-220ENST00000613744 VWA3BQ502W6 1294 aa23.84■■□□□ 1.41
POLR2J3-220ENST00000613744 CATSPERGQ6ZRH7 1159 aa23.84■■□□□ 1.41
POLR2J3-220ENST00000613744 RAPGEF5Q92565 580 aa23.84■■□□□ 1.41
POLR2J3-220ENST00000613744 GPKOWQ92917 476 aaPredicted RBP eCLIP23.84■■□□□ 1.41
POLR2J3-220ENST00000613744 MS4A14Q96JA4 679 aa23.84■■□□□ 1.41
POLR2J3-220ENST00000613744 SPZ1Q9BXG8 430 aa23.84■■□□□ 1.41
POLR2J3-220ENST00000613744 AGTPBP1Q9UPW5 1226 aa23.84■■□□□ 1.41
POLR2J3-220ENST00000613744 ESYT3A0FGR9 886 aa23.83■■□□□ 1.41
POLR2J3-220ENST00000613744 ZNF844Q08AG5 666 aa23.83■■□□□ 1.41
POLR2J3-220ENST00000613744 E2F5Q15329 346 aa23.83■■□□□ 1.41
POLR2J3-220ENST00000613744 SPRED3Q2MJR0 410 aa23.83■■□□□ 1.41
POLR2J3-220ENST00000613744 SPDYCQ5MJ68 293 aa23.83■■□□□ 1.41
POLR2J3-220ENST00000613744 ANKRD40Q6AI12 368 aa23.83■■□□□ 1.41
POLR2J3-220ENST00000613744 PIGSQ96S52 555 aa23.83■■□□□ 1.41
POLR2J3-220ENST00000613744 SALL4Q9UJQ4 1053 aa23.83■■□□□ 1.41
POLR2J3-220ENST00000613744 FEM1BQ9UK73 627 aa23.83■■□□□ 1.41
POLR2J3-220ENST00000613744 PRR12Q9ULL5 1215 aa23.83■■□□□ 1.41
POLR2J3-220ENST00000613744 USP17L15C9J2P7 530 aa23.83■■□□□ 1.41
POLR2J3-220ENST00000613744 USP17L13C9JLJ4 530 aa23.83■■□□□ 1.41
POLR2J3-220ENST00000613744 USP17L11C9JVI0 530 aa23.83■■□□□ 1.41
POLR2J3-220ENST00000613744 USP17L18D6R9N7 530 aa23.83■■□□□ 1.41
POLR2J3-220ENST00000613744 USP17L22D6RA61 530 aa23.83■■□□□ 1.41
POLR2J3-220ENST00000613744 USP17L17D6RBQ6 530 aa23.83■■□□□ 1.41
POLR2J3-220ENST00000613744 USP17L19D6RCP7 530 aa23.83■■□□□ 1.41
POLR2J3-220ENST00000613744 USP17L20D6RJB6 530 aa23.83■■□□□ 1.41
POLR2J3-220ENST00000613744 PEX10O60683 326 aa23.83■■□□□ 1.41
POLR2J3-220ENST00000613744 FGFR1OPO95684 399 aaKnown RBP23.83■■□□□ 1.41
POLR2J3-220ENST00000613744 SCG2P13521 617 aa23.83■■□□□ 1.41
POLR2J3-220ENST00000613744 DRD4P21917 467 aa23.83■■□□□ 1.41
POLR2J3-220ENST00000613744 CALML3P27482 149 aa23.83■■□□□ 1.41
POLR2J3-220ENST00000613744 USP17L24Q0WX57 530 aa23.83■■□□□ 1.41
POLR2J3-220ENST00000613744 MEI1Q5TIA1 1274 aa23.83■■□□□ 1.41
POLR2J3-220ENST00000613744 SYDE2Q5VT97 1194 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms