RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 ELOA2Q8IYF1 753 aaPredicted RBP9.82□□□□□ -0.84
SMAD4-217ENST00000611848 EXOC8Q8IYI6 725 aa9.82□□□□□ -0.84
SMAD4-217ENST00000611848 SCLYQ96I15 445 aa9.82□□□□□ -0.84
SMAD4-217ENST00000611848 BPIFA3Q9BQP9 254 aa9.82□□□□□ -0.84
SMAD4-217ENST00000611848 JPH2Q9BR39 696 aaPredicted RBP9.82□□□□□ -0.84
SMAD4-217ENST00000611848 IL23AQ9NPF7 189 aa9.82□□□□□ -0.84
SMAD4-217ENST00000611848 LRWD1Q9UFC0 647 aa9.82□□□□□ -0.84
SMAD4-217ENST00000611848 LOXHD1Q8IVV2 1947 aa9.82□□□□□ -0.84
SMAD4-217ENST00000611848 RSPH10B2B2RC85 870 aa9.82□□□□□ -0.84
SMAD4-217ENST00000611848 RSPH10BP0C881 870 aa9.82□□□□□ -0.84
SMAD4-217ENST00000611848 CDC25BP30305 580 aa9.82□□□□□ -0.84
SMAD4-217ENST00000611848 MTERF2Q49AM1 385 aa9.82□□□□□ -0.84
SMAD4-217ENST00000611848 FAM26DQ5JW98 314 aa9.82□□□□□ -0.84
SMAD4-217ENST00000611848 IER5Q5VY09 327 aa9.82□□□□□ -0.84
SMAD4-217ENST00000611848 KRT79Q5XKE5 535 aa9.82□□□□□ -0.84
SMAD4-217ENST00000611848 PSRC1Q6PGN9 363 aaPredicted RBP9.82□□□□□ -0.84
SMAD4-217ENST00000611848 ANO5Q75V66 913 aa9.82□□□□□ -0.84
SMAD4-217ENST00000611848 CATSPER3Q86XQ3 398 aa9.82□□□□□ -0.84
SMAD4-217ENST00000611848 DHX40Q8IX18 779 aaKnown RBP9.82□□□□□ -0.84
SMAD4-217ENST00000611848 ZNF710Q8N1W2 664 aa9.82□□□□□ -0.84
SMAD4-217ENST00000611848 DNAJB3Q8WWF6 145 aa9.82□□□□□ -0.84
SMAD4-217ENST00000611848 CYP26B1Q9NR63 512 aa9.82□□□□□ -0.84
SMAD4-217ENST00000611848 ANKEF1Q9NU02 776 aa9.82□□□□□ -0.84
SMAD4-217ENST00000611848 PCDH10Q9P2E7 1040 aa9.82□□□□□ -0.84
SMAD4-217ENST00000611848 WRAP73Q9P2S5 460 aaPredicted RBP9.82□□□□□ -0.84
SMAD4-217ENST00000611848 IGKV6-21A0A0C4DH24 114 aa9.81□□□□□ -0.84
SMAD4-217ENST00000611848 VWA3AA6NCI4 1184 aa9.81□□□□□ -0.84
SMAD4-217ENST00000611848 GOLGA6L6A8MZA4 724 aa9.81□□□□□ -0.84
SMAD4-217ENST00000611848 M0QZ92 97 aa9.81□□□□□ -0.84
SMAD4-217ENST00000611848 MED24O75448 989 aa9.81□□□□□ -0.84
SMAD4-217ENST00000611848 CXCL10P02778 98 aa9.81□□□□□ -0.84
SMAD4-217ENST00000611848 SPATA31C1P0DKV0 1188 aa9.81□□□□□ -0.84
SMAD4-217ENST00000611848 IL17AQ16552 155 aa9.81□□□□□ -0.84
SMAD4-217ENST00000611848 TMEM132AQ24JP5 1023 aa9.81□□□□□ -0.84
SMAD4-217ENST00000611848 EFCAB12Q6NXP0 572 aa9.81□□□□□ -0.84
SMAD4-217ENST00000611848 TRAF7Q6Q0C0 670 aa9.81□□□□□ -0.84
SMAD4-217ENST00000611848 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.81□□□□□ -0.84
SMAD4-217ENST00000611848 CEP57L1Q8IYX8 460 aa9.81□□□□□ -0.84
SMAD4-217ENST00000611848 KIAA0319LQ8IZA0 1049 aa9.81□□□□□ -0.84
SMAD4-217ENST00000611848 TDHQ8IZJ6 230 aa9.81□□□□□ -0.84
SMAD4-217ENST00000611848 METTL13Q8N6R0 699 aa9.81□□□□□ -0.84
SMAD4-217ENST00000611848 KRI1Q8N9T8 703 aaKnown RBP9.81□□□□□ -0.84
SMAD4-217ENST00000611848 ZNF579Q8NAF0 562 aaKnown RBP9.81□□□□□ -0.84
SMAD4-217ENST00000611848 ZBTB10Q96DT7 871 aa9.81□□□□□ -0.84
SMAD4-217ENST00000611848 CEP170P1Q96L14 293 aa9.81□□□□□ -0.84
SMAD4-217ENST00000611848 AK8Q96MA6 479 aa9.81□□□□□ -0.84
SMAD4-217ENST00000611848 NACC1Q96RE7 527 aa9.81□□□□□ -0.84
SMAD4-217ENST00000611848 CEP89Q96ST8 783 aa9.81□□□□□ -0.84
SMAD4-217ENST00000611848 MAP7D2Q96T17 732 aa9.81□□□□□ -0.84
SMAD4-217ENST00000611848 NAT10Q9H0A0 1025 aaKnown RBP9.81□□□□□ -0.84
SMAD4-217ENST00000611848 FAM49AQ9H0Q0 323 aaPredicted RBP9.81□□□□□ -0.84
SMAD4-217ENST00000611848 COLQQ9Y215 455 aaPredicted RBP9.81□□□□□ -0.84
SMAD4-217ENST00000611848 ARID2Q68CP9 1835 aa9.8□□□□□ -0.84
SMAD4-217ENST00000611848 KDM3AQ9Y4C1 1321 aa9.8□□□□□ -0.84
SMAD4-217ENST00000611848 TMEM150BA6NC51 233 aa9.8□□□□□ -0.84
SMAD4-217ENST00000611848 GOLGA6L19H0YKK7 550 aa9.8□□□□□ -0.84
SMAD4-217ENST00000611848 SLC26A4O43511 780 aa9.8□□□□□ -0.84
SMAD4-217ENST00000611848 MAFO75444 373 aaPredicted RBP9.8□□□□□ -0.84
SMAD4-217ENST00000611848 CTSHP09668 335 aa9.8□□□□□ -0.84
SMAD4-217ENST00000611848 ACRP10323 421 aa9.8□□□□□ -0.84
SMAD4-217ENST00000611848 ACTN1P12814 892 aa9.8□□□□□ -0.84
SMAD4-217ENST00000611848 CCT6AP40227 531 aaKnown RBP9.8□□□□□ -0.84
SMAD4-217ENST00000611848 RFC5P40937 340 aa9.8□□□□□ -0.84
SMAD4-217ENST00000611848 SYKP43405 635 aa9.8□□□□□ -0.84
SMAD4-217ENST00000611848 NUBP1P53384 320 aa9.8□□□□□ -0.84
SMAD4-217ENST00000611848 EPHB4P54760 987 aa9.8□□□□□ -0.84
SMAD4-217ENST00000611848 NPEPPSP55786 919 aa9.8□□□□□ -0.84
SMAD4-217ENST00000611848 NLRP12P59046 1061 aa9.8□□□□□ -0.84
SMAD4-217ENST00000611848 MRPS6P82932 125 aaKnown RBP9.8□□□□□ -0.84
SMAD4-217ENST00000611848 CDC42EP1Q00587 391 aa9.8□□□□□ -0.84
SMAD4-217ENST00000611848 MGAT3Q09327 533 aa9.8□□□□□ -0.84
SMAD4-217ENST00000611848 GPNMBQ14956 572 aa9.8□□□□□ -0.84
SMAD4-217ENST00000611848 XKR9Q5GH70 373 aa9.8□□□□□ -0.84
SMAD4-217ENST00000611848 TMEM240Q5SV17 173 aa9.8□□□□□ -0.84
SMAD4-217ENST00000611848 PLA2G4FQ68DD2 849 aa9.8□□□□□ -0.84
SMAD4-217ENST00000611848 C16orf59Q7L2K0 433 aa9.8□□□□□ -0.84
SMAD4-217ENST00000611848 DEFB128Q7Z7B8 93 aa9.8□□□□□ -0.84
SMAD4-217ENST00000611848 KCTD17Q8N5Z5 321 aa9.8□□□□□ -0.84
SMAD4-217ENST00000611848 LINC01465Q8N7H1 131 aa9.8□□□□□ -0.84
SMAD4-217ENST00000611848 SNX29Q8TEQ0 813 aa9.8□□□□□ -0.84
SMAD4-217ENST00000611848 SLC7A3Q8WY07 619 aa9.8□□□□□ -0.84
SMAD4-217ENST00000611848 MRFAP1L1Q96HT8 127 aa9.8□□□□□ -0.84
SMAD4-217ENST00000611848 ZNF830Q96NB3 372 aaPredicted RBP9.8□□□□□ -0.84
SMAD4-217ENST00000611848 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.8□□□□□ -0.84
SMAD4-217ENST00000611848 DHX33Q9H6R0 707 aaKnown RBP9.8□□□□□ -0.84
SMAD4-217ENST00000611848 SUGCTQ9HAC7 445 aa9.8□□□□□ -0.84
SMAD4-217ENST00000611848 FBXO2Q9UK22 296 aaPredicted RBP9.8□□□□□ -0.84
SMAD4-217ENST00000611848 TRPV2Q9Y5S1 764 aa9.8□□□□□ -0.84
SMAD4-217ENST00000611848 SQORQ9Y6N5 450 aa9.8□□□□□ -0.84
SMAD4-217ENST00000611848 RANBP2P49792 3224 aaKnown RBP9.79□□□□□ -0.84
SMAD4-217ENST00000611848 STK25O00506 426 aa9.79□□□□□ -0.84
SMAD4-217ENST00000611848 ZBTB39O15060 712 aa9.79□□□□□ -0.84
SMAD4-217ENST00000611848 GAS2O43903 313 aaKnown RBP9.79□□□□□ -0.84
SMAD4-217ENST00000611848 NBNO60934 754 aa9.79□□□□□ -0.84
SMAD4-217ENST00000611848 DGAT1O75907 488 aa9.79□□□□□ -0.84
SMAD4-217ENST00000611848 FGBP02675 491 aa9.79□□□□□ -0.84
SMAD4-217ENST00000611848 CHRNA1P02708 482 aa9.79□□□□□ -0.84
SMAD4-217ENST00000611848 LONP1P36776 959 aaKnown RBP9.79□□□□□ -0.84
SMAD4-217ENST00000611848 RARRES1P49788 294 aa9.79□□□□□ -0.84
SMAD4-217ENST00000611848 DNM2P50570 870 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms