RNA–Protein interactions for RNA: ENST00000610452.1

COL15A1-205, Transcript of collagen type XV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL15A1, Length 5,422 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-205ENST00000610452 FOXR1Q6PIV2 292 aa21.52■■□□□ 1.04
COL15A1-205ENST00000610452 SDR42E1Q8WUS8 393 aa21.52■■□□□ 1.04
COL15A1-205ENST00000610452 CATSPER2Q96P56 530 aa21.52■■□□□ 1.04
COL15A1-205ENST00000610452 TRIM10Q9UDY6 481 aa21.52■■□□□ 1.04
COL15A1-205ENST00000610452 PPP1R2P3Q6NXS1 205 aa21.52■■□□□ 1.04
COL15A1-205ENST00000610452 NDEL1Q9GZM8 345 aa21.52■■□□□ 1.04
COL15A1-205ENST00000610452 C15orf41Q9Y2V0 281 aa21.52■■□□□ 1.04
COL15A1-205ENST00000610452 GOLGA8HP0CJ92 632 aa21.52■■□□□ 1.04
COL15A1-205ENST00000610452 KCNA6P17658 529 aa21.52■■□□□ 1.04
COL15A1-205ENST00000610452 TRIM67Q6ZTA4 783 aa21.52■■□□□ 1.04
COL15A1-205ENST00000610452 LRRC34Q8IZ02 419 aa21.52■■□□□ 1.04
COL15A1-205ENST00000610452 DNAAF3Q8N9W5 541 aa21.52■■□□□ 1.04
COL15A1-205ENST00000610452 CALN1Q9BXU9 219 aa21.52■■□□□ 1.04
COL15A1-205ENST00000610452 KLHL25Q9H0H3 589 aa21.52■■□□□ 1.04
COL15A1-205ENST00000610452 MRPL28Q13084 256 aaKnown RBP21.52■■□□□ 1.03
COL15A1-205ENST00000610452 THOC5Q13769 683 aaKnown RBP21.52■■□□□ 1.03
COL15A1-205ENST00000610452 CDR2LQ86X02 465 aaPredicted RBP21.52■■□□□ 1.03
COL15A1-205ENST00000610452 EME1Q96AY2 570 aa21.52■■□□□ 1.03
COL15A1-205ENST00000610452 SH3GL1Q99961 368 aa21.52■■□□□ 1.03
COL15A1-205ENST00000610452 WDR7Q9Y4E6 1490 aa21.51■■□□□ 1.03
COL15A1-205ENST00000610452 PCDH11XQ9BZA7 1347 aa21.51■■□□□ 1.03
COL15A1-205ENST00000610452 PCDH11YQ9BZA8 1340 aa21.51■■□□□ 1.03
COL15A1-205ENST00000610452 TJP3O95049 919 aa21.51■■□□□ 1.03
COL15A1-205ENST00000610452 MYCLP12524 364 aaPredicted RBP21.51■■□□□ 1.03
COL15A1-205ENST00000610452 GAP43P17677 238 aa21.51■■□□□ 1.03
COL15A1-205ENST00000610452 UBE3CQ15386 1083 aa21.51■■□□□ 1.03
COL15A1-205ENST00000610452 CATSPER3Q86XQ3 398 aa21.51■■□□□ 1.03
COL15A1-205ENST00000610452 ZKSCAN4Q969J2 545 aaPredicted RBP21.51■■□□□ 1.03
COL15A1-205ENST00000610452 NMD3Q96D46 503 aaKnown RBP21.51■■□□□ 1.03
COL15A1-205ENST00000610452 HEMGNQ9BXL5 484 aa21.51■■□□□ 1.03
COL15A1-205ENST00000610452 NYXQ9GZU5 481 aa21.51■■□□□ 1.03
COL15A1-205ENST00000610452 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.51■■□□□ 1.03
COL15A1-205ENST00000610452 PIK3CAP42336 1068 aa21.51■■□□□ 1.03
COL15A1-205ENST00000610452 ARHGDIAP52565 204 aa21.51■■□□□ 1.03
COL15A1-205ENST00000610452 DMPKQ09013 629 aa21.51■■□□□ 1.03
COL15A1-205ENST00000610452 PRPSAP1Q14558 356 aa21.51■■□□□ 1.03
COL15A1-205ENST00000610452 DNAJC24Q6P3W2 148 aa21.51■■□□□ 1.03
COL15A1-205ENST00000610452 MDM1Q8TC05 714 aa21.51■■□□□ 1.03
COL15A1-205ENST00000610452 ALG13Q9NP73 1137 aaKnown RBP21.51■■□□□ 1.03
COL15A1-205ENST00000610452 WDR64B1ANS9 1081 aa21.51■■□□□ 1.03
COL15A1-205ENST00000610452 B2RBV5 119 aa21.51■■□□□ 1.03
COL15A1-205ENST00000610452 NBPF26B4DH59 902 aa21.51■■□□□ 1.03
COL15A1-205ENST00000610452 KIAA1755Q5JYT7 1200 aa21.51■■□□□ 1.03
COL15A1-205ENST00000610452 NBPF15Q8N660 670 aa21.51■■□□□ 1.03
COL15A1-205ENST00000610452 MAML3Q96JK9 1138 aa21.51■■□□□ 1.03
COL15A1-205ENST00000610452 COPRSQ9NQ92 184 aa21.51■■□□□ 1.03
COL15A1-205ENST00000610452 MROH5Q6ZUA9 1318 aa21.51■■□□□ 1.03
COL15A1-205ENST00000610452 KPNA7A9QM74 516 aa21.51■■□□□ 1.03
COL15A1-205ENST00000610452 TMEM120BA0PK00 339 aa21.5■■□□□ 1.03
COL15A1-205ENST00000610452 CAPN9O14815 690 aa21.5■■□□□ 1.03
COL15A1-205ENST00000610452 SERPINB2P05120 415 aa21.5■■□□□ 1.03
COL15A1-205ENST00000610452 ZNF483Q8TF39 744 aaPredicted RBP21.5■■□□□ 1.03
COL15A1-205ENST00000610452 RMI1Q9H9A7 625 aa21.5■■□□□ 1.03
COL15A1-205ENST00000610452 IPO11Q9UI26 975 aaKnown RBP21.5■■□□□ 1.03
COL15A1-205ENST00000610452 LONRF1Q17RB8 773 aa21.5■■□□□ 1.03
COL15A1-205ENST00000610452 NSMFQ6X4W1 530 aa21.5■■□□□ 1.03
COL15A1-205ENST00000610452 TTC7AQ9ULT0 858 aaPredicted RBP21.5■■□□□ 1.03
COL15A1-205ENST00000610452 GTPBP10A4D1E9 387 aaKnown RBP21.5■■□□□ 1.03
COL15A1-205ENST00000610452 GOLGA8SH3BPF8 625 aa21.5■■□□□ 1.03
COL15A1-205ENST00000610452 GOLGA8MH3BSY2 632 aa21.5■■□□□ 1.03
COL15A1-205ENST00000610452 KCTD6Q8NC69 237 aa21.5■■□□□ 1.03
COL15A1-205ENST00000610452 DDI1Q8WTU0 396 aa21.5■■□□□ 1.03
COL15A1-205ENST00000610452 PPP4R3CPQ6ZMV5 832 aa21.5■■□□□ 1.03
COL15A1-205ENST00000610452 STRNO43815 780 aa21.5■■□□□ 1.03
COL15A1-205ENST00000610452 CDH16O75309 829 aa21.5■■□□□ 1.03
COL15A1-205ENST00000610452 CACNA2D1P54289 1103 aa21.5■■□□□ 1.03
COL15A1-205ENST00000610452 GALNT4Q8N4A0 578 aa21.5■■□□□ 1.03
COL15A1-205ENST00000610452 EYA3Q99504 573 aa21.5■■□□□ 1.03
COL15A1-205ENST00000610452 TSSK1BQ9BXA7 367 aa21.5■■□□□ 1.03
COL15A1-205ENST00000610452 ZRANB2O95218 330 aaKnown RBP eCLIP21.49■■□□□ 1.03
COL15A1-205ENST00000610452 FXR1P51114 621 aaKnown RBP eCLIP21.49■■□□□ 1.03
COL15A1-205ENST00000610452 EFTUD2Q15029 972 aaKnown RBP eCLIP21.49■■□□□ 1.03
COL15A1-205ENST00000610452 KRT39Q6A163 491 aa21.49■■□□□ 1.03
COL15A1-205ENST00000610452 COQ7Q99807 217 aa21.49■■□□□ 1.03
COL15A1-205ENST00000610452 GPC5P78333 572 aa21.49■■□□□ 1.03
COL15A1-205ENST00000610452 CDC37Q16543 378 aaPredicted RBP21.49■■□□□ 1.03
COL15A1-205ENST00000610452 MAPKAPK5Q8IW41 473 aa21.49■■□□□ 1.03
COL15A1-205ENST00000610452 DEPTORQ8TB45 409 aa21.49■■□□□ 1.03
COL15A1-205ENST00000610452 FAM47DPA6NHR8 397 aa21.49■■□□□ 1.03
COL15A1-205ENST00000610452 FOXN1O15353 648 aa21.49■■□□□ 1.03
COL15A1-205ENST00000610452 WBP4O75554 376 aaKnown RBP21.49■■□□□ 1.03
COL15A1-205ENST00000610452 TNNC2P02585 160 aa21.49■■□□□ 1.03
COL15A1-205ENST00000610452 IL10P22301 178 aa21.49■■□□□ 1.03
COL15A1-205ENST00000610452 PREPLQ4J6C6 727 aaPredicted RBP21.49■■□□□ 1.03
COL15A1-205ENST00000610452 ZBED8Q8IZ13 594 aa21.49■■□□□ 1.03
COL15A1-205ENST00000610452 KCNK16Q96T55 309 aa21.49■■□□□ 1.03
COL15A1-205ENST00000610452 ADNPQ9H2P0 1102 aa21.49■■□□□ 1.03
COL15A1-205ENST00000610452 SMARCAL1Q9NZC9 954 aa21.49■■□□□ 1.03
COL15A1-205ENST00000610452 ERVK-7P63135 1459 aa21.49■■□□□ 1.03
COL15A1-205ENST00000610452 TARSP26639 723 aaKnown RBP21.49■■□□□ 1.03
COL15A1-205ENST00000610452 KYNUQ16719 465 aa21.49■■□□□ 1.03
COL15A1-205ENST00000610452 KLC3Q6P597 504 aa21.49■■□□□ 1.03
COL15A1-205ENST00000610452 SHC4Q6S5L8 630 aa21.49■■□□□ 1.03
COL15A1-205ENST00000610452 ATP6V0A1Q93050 837 aa21.49■■□□□ 1.03
COL15A1-205ENST00000610452 ATP6V1E2Q96A05 226 aa21.49■■□□□ 1.03
COL15A1-205ENST00000610452 FAF2Q96CS3 445 aa21.49■■□□□ 1.03
COL15A1-205ENST00000610452 RIOK1Q9BRS2 568 aaKnown RBP21.49■■□□□ 1.03
COL15A1-205ENST00000610452 DCLRE1BQ9H816 532 aa21.49■■□□□ 1.03
COL15A1-205ENST00000610452 GPHNQ9NQX3 736 aaPredicted RBP21.49■■□□□ 1.03
COL15A1-205ENST00000610452 ADAMTS12P58397 1594 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms