RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 IRS2Q9Y4H2 1338 aa22.14■■□□□ 1.13
SSBP3-216ENST00000610401 MMEP08473 750 aa22.13■■□□□ 1.13
SSBP3-216ENST00000610401 GKAP1Q5VSY0 366 aaPredicted RBP22.13■■□□□ 1.13
SSBP3-216ENST00000610401 TBC1D1Q86TI0 1168 aaPredicted RBP22.13■■□□□ 1.13
SSBP3-216ENST00000610401 TBC1D16Q8TBP0 767 aa22.13■■□□□ 1.13
SSBP3-216ENST00000610401 DAAM1Q9Y4D1 1078 aa22.13■■□□□ 1.13
SSBP3-216ENST00000610401 MYH4Q9Y623 1939 aa22.13■■□□□ 1.13
SSBP3-216ENST00000610401 ASTN1O14525 1302 aa22.13■■□□□ 1.13
SSBP3-216ENST00000610401 TCRBV7S2A1N4TA0A589 114 aa22.13■■□□□ 1.13
SSBP3-216ENST00000610401 CALUO43852 315 aaPredicted RBP22.13■■□□□ 1.13
SSBP3-216ENST00000610401 SHMT1P34896 483 aa22.13■■□□□ 1.13
SSBP3-216ENST00000610401 SEMA3FQ13275 785 aa22.13■■□□□ 1.13
SSBP3-216ENST00000610401 MREGQ8N565 214 aa22.13■■□□□ 1.13
SSBP3-216ENST00000610401 CXorf56Q9H5V9 222 aa22.13■■□□□ 1.13
SSBP3-216ENST00000610401 RABGAP1Q9Y3P9 1069 aa22.13■■□□□ 1.13
SSBP3-216ENST00000610401 UBAP1LF5GYI3 381 aa22.13■■□□□ 1.13
SSBP3-216ENST00000610401 FSBPO95073 299 aa22.13■■□□□ 1.13
SSBP3-216ENST00000610401 ZKSCAN8Q15776 578 aaPredicted RBP22.13■■□□□ 1.13
SSBP3-216ENST00000610401 ANKRD42Q8N9B4 389 aa22.13■■□□□ 1.13
SSBP3-216ENST00000610401 ACTRT1Q8TDG2 376 aa22.13■■□□□ 1.13
SSBP3-216ENST00000610401 HVCN1Q96D96 273 aa22.13■■□□□ 1.13
SSBP3-216ENST00000610401 SIX2Q9NPC8 291 aa22.13■■□□□ 1.13
SSBP3-216ENST00000610401 C2CD6Q53TS8 623 aa22.12■■□□□ 1.13
SSBP3-216ENST00000610401 DBNDD1Q9H9R9 158 aa22.12■■□□□ 1.13
SSBP3-216ENST00000610401 KIAA1551Q9HCM1 1747 aa22.12■■□□□ 1.13
SSBP3-216ENST00000610401 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.12■■□□□ 1.13
SSBP3-216ENST00000610401 ACSL3O95573 720 aa22.12■■□□□ 1.13
SSBP3-216ENST00000610401 CYB5D1Q6P9G0 228 aa22.12■■□□□ 1.13
SSBP3-216ENST00000610401 DYDC1Q8WWB3 177 aa22.12■■□□□ 1.13
SSBP3-216ENST00000610401 KAT5Q92993 513 aa22.12■■□□□ 1.13
SSBP3-216ENST00000610401 CEP89Q96ST8 783 aa22.12■■□□□ 1.13
SSBP3-216ENST00000610401 COG5Q9UP83 839 aa22.12■■□□□ 1.13
SSBP3-216ENST00000610401 SCTRP47872 440 aa22.11■■□□□ 1.13
SSBP3-216ENST00000610401 CCDC174Q6PII3 467 aa22.11■■□□□ 1.13
SSBP3-216ENST00000610401 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.11■■□□□ 1.13
SSBP3-216ENST00000610401 FOXN3O00409 490 aaPredicted RBP22.11■■□□□ 1.13
SSBP3-216ENST00000610401 MEIS2O14770 477 aa22.11■■□□□ 1.13
SSBP3-216ENST00000610401 CLK2P49760 499 aaKnown RBP22.11■■□□□ 1.13
SSBP3-216ENST00000610401 SEPT14Q6ZU15 432 aa22.11■■□□□ 1.13
SSBP3-216ENST00000610401 ZSWIM2Q8NEG5 633 aa22.11■■□□□ 1.13
SSBP3-216ENST00000610401 RUBCNQ92622 972 aa22.11■■□□□ 1.13
SSBP3-216ENST00000610401 TBK1Q9UHD2 729 aa22.11■■□□□ 1.13
SSBP3-216ENST00000610401 PHLPP1O60346 1717 aa22.11■■□□□ 1.13
SSBP3-216ENST00000610401 CREB1P16220 341 aa22.11■■□□□ 1.13
SSBP3-216ENST00000610401 DLG4P78352 724 aa22.11■■□□□ 1.13
SSBP3-216ENST00000610401 CD302Q8IX05 232 aa22.11■■□□□ 1.13
SSBP3-216ENST00000610401 LMBR1Q8WVP7 490 aa22.11■■□□□ 1.13
SSBP3-216ENST00000610401 N4BP2L2Q92802 583 aaPredicted RBP22.11■■□□□ 1.13
SSBP3-216ENST00000610401 DYDC2Q96IM9 177 aa22.11■■□□□ 1.13
SSBP3-216ENST00000610401 EIF2AK1Q9BQI3 630 aaKnown RBP22.11■■□□□ 1.13
SSBP3-216ENST00000610401 MSH4O15457 936 aa22.1■■□□□ 1.13
SSBP3-216ENST00000610401 RGS16O15492 202 aaPredicted RBP22.1■■□□□ 1.13
SSBP3-216ENST00000610401 EXOC3O60645 756 aa22.1■■□□□ 1.13
SSBP3-216ENST00000610401 TNIP1Q15025 636 aa22.1■■□□□ 1.13
SSBP3-216ENST00000610401 ANKRD20A8PQ5CZ79 823 aa22.1■■□□□ 1.13
SSBP3-216ENST00000610401 DENND2CQ68D51 928 aa22.1■■□□□ 1.13
SSBP3-216ENST00000610401 MSL1Q68DK7 614 aa22.1■■□□□ 1.13
SSBP3-216ENST00000610401 MRRFQ96E11 262 aaKnown RBP22.1■■□□□ 1.13
SSBP3-216ENST00000610401 PWWP2AQ96N64 755 aa22.1■■□□□ 1.13
SSBP3-216ENST00000610401 UBE2TQ9NPD8 197 aaPredicted RBP22.1■■□□□ 1.13
SSBP3-216ENST00000610401 TGFB1I1O43294 461 aa22.1■■□□□ 1.13
SSBP3-216ENST00000610401 DAB2IPQ5VWQ8 1189 aa22.1■■□□□ 1.13
SSBP3-216ENST00000610401 LRRC34Q8IZ02 419 aa22.1■■□□□ 1.13
SSBP3-216ENST00000610401 GDAP1Q8TB36 358 aa22.1■■□□□ 1.13
SSBP3-216ENST00000610401 RNF25Q96BH1 459 aaPredicted RBP22.1■■□□□ 1.13
SSBP3-216ENST00000610401 GOLGA8IPA6NC78 632 aa22.09■■□□□ 1.13
SSBP3-216ENST00000610401 GOLGA8JA6NMD2 632 aa22.09■■□□□ 1.13
SSBP3-216ENST00000610401 SSTR3P32745 418 aaPredicted RBP22.09■■□□□ 1.13
SSBP3-216ENST00000610401 FRMD5Q7Z6J6 570 aa22.09■■□□□ 1.13
SSBP3-216ENST00000610401 CCDC105Q8IYK2 499 aa22.09■■□□□ 1.13
SSBP3-216ENST00000610401 ERMNQ8TAM6 284 aa22.09■■□□□ 1.13
SSBP3-216ENST00000610401 GCLMP48507 274 aa22.09■■□□□ 1.13
SSBP3-216ENST00000610401 LONRF1Q17RB8 773 aa22.09■■□□□ 1.13
SSBP3-216ENST00000610401 PARP9Q8IXQ6 854 aa22.09■■□□□ 1.13
SSBP3-216ENST00000610401 FUKQ8N0W3 1084 aa22.09■■□□□ 1.13
SSBP3-216ENST00000610401 KCNK9Q9NPC2 374 aa22.09■■□□□ 1.13
SSBP3-216ENST00000610401 TPX2Q9ULW0 747 aaKnown RBP22.09■■□□□ 1.13
SSBP3-216ENST00000610401 L3MBTL1Q9Y468 752 aa22.09■■□□□ 1.13
SSBP3-216ENST00000610401 ANKRD63C9JTQ0 380 aa22.09■■□□□ 1.13
SSBP3-216ENST00000610401 RPL13P26373 211 aaKnown RBP22.09■■□□□ 1.13
SSBP3-216ENST00000610401 PMS2P54278 862 aa22.09■■□□□ 1.13
SSBP3-216ENST00000610401 BYSLQ13895 437 aaKnown RBP22.09■■□□□ 1.13
SSBP3-216ENST00000610401 EDRF1Q3B7T1 1238 aa22.09■■□□□ 1.13
SSBP3-216ENST00000610401 ODR4Q5SWX8 454 aa22.09■■□□□ 1.13
SSBP3-216ENST00000610401 CDC42EP5Q6NZY7 148 aa22.09■■□□□ 1.13
SSBP3-216ENST00000610401 KIF2BQ8N4N8 673 aa22.09■■□□□ 1.13
SSBP3-216ENST00000610401 CDCA7Q9BWT1 371 aaPredicted RBP22.09■■□□□ 1.13
SSBP3-216ENST00000610401 KCNMB3Q9NPA1 279 aa22.09■■□□□ 1.13
SSBP3-216ENST00000610401 SCN7AQ01118 1682 aa22.09■■□□□ 1.13
SSBP3-216ENST00000610401 EPC2Q52LR7 807 aa22.08■■□□□ 1.13
SSBP3-216ENST00000610401 DPY19L2P1Q6NXN4 242 aa22.08■■□□□ 1.13
SSBP3-216ENST00000610401 EP400NLQ6ZTU2 488 aa22.08■■□□□ 1.13
SSBP3-216ENST00000610401 JAMLQ86YT9 394 aa22.08■■□□□ 1.13
SSBP3-216ENST00000610401 ATP8B4Q8TF62 1192 aa22.08■■□□□ 1.13
SSBP3-216ENST00000610401 ZC3H12CQ9C0D7 883 aaKnown RBP22.08■■□□□ 1.13
SSBP3-216ENST00000610401 STK38LQ9Y2H1 464 aa22.08■■□□□ 1.13
SSBP3-216ENST00000610401 ALG6Q9Y672 507 aa22.08■■□□□ 1.13
SSBP3-216ENST00000610401 SPATA31A5Q5VU36 1347 aa22.08■■□□□ 1.13
SSBP3-216ENST00000610401 SPATA31A7Q8IWB4 1347 aa22.08■■□□□ 1.13
SSBP3-216ENST00000610401 DDTLA6NHG4 134 aaPredicted RBP22.08■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms