RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 ARHGAP28Q9P2N2 729 aa5.86□□□□□ -1.47
SMCHD1-213ENST00000609587 DDX3XO00571 662 aaKnown RBP eCLIP5.85□□□□□ -1.47
SMCHD1-213ENST00000609587 CD40P25942 277 aa5.85□□□□□ -1.47
SMCHD1-213ENST00000609587 AOAHP28039 575 aa5.85□□□□□ -1.47
SMCHD1-213ENST00000609587 IL13P35225 146 aa5.85□□□□□ -1.47
SMCHD1-213ENST00000609587 MLLT6P55198 1093 aaPredicted RBP5.85□□□□□ -1.47
SMCHD1-213ENST00000609587 EXOSC10Q01780 885 aaKnown RBP5.85□□□□□ -1.47
SMCHD1-213ENST00000609587 PFKPQ01813 784 aa5.85□□□□□ -1.47
SMCHD1-213ENST00000609587 ADCY1Q08828 1119 aa5.85□□□□□ -1.47
SMCHD1-213ENST00000609587 ITKQ08881 620 aa5.85□□□□□ -1.47
SMCHD1-213ENST00000609587 EPHA7Q15375 998 aa5.85□□□□□ -1.47
SMCHD1-213ENST00000609587 PLEKHG6Q3KR16 790 aa5.85□□□□□ -1.47
SMCHD1-213ENST00000609587 PRAMEF18Q5VWM3 479 aa5.85□□□□□ -1.47
SMCHD1-213ENST00000609587 ESRP1Q6NXG1 681 aaKnown RBP5.85□□□□□ -1.47
SMCHD1-213ENST00000609587 CIR1Q86X95 450 aaPredicted RBP5.85□□□□□ -1.47
SMCHD1-213ENST00000609587 NME9Q86XW9 330 aa5.85□□□□□ -1.47
SMCHD1-213ENST00000609587 CNTD1Q8N815 330 aa5.85□□□□□ -1.47
SMCHD1-213ENST00000609587 ZNF610Q8N9Z0 462 aa5.85□□□□□ -1.47
SMCHD1-213ENST00000609587 MTMR8Q96EF0 704 aa5.85□□□□□ -1.47
SMCHD1-213ENST00000609587 C16orf92Q96LL3 132 aa5.85□□□□□ -1.47
SMCHD1-213ENST00000609587 ZSWIM3Q96MP5 696 aa5.85□□□□□ -1.47
SMCHD1-213ENST00000609587 NOC2LQ9Y3T9 749 aaKnown RBP5.85□□□□□ -1.47
SMCHD1-213ENST00000609587 ASB1Q9Y576 335 aa5.85□□□□□ -1.47
SMCHD1-213ENST00000609587 PRAMEF22A3QJZ6 481 aa5.84□□□□□ -1.47
SMCHD1-213ENST00000609587 C9orf118A6NHY6 69 aa5.84□□□□□ -1.47
SMCHD1-213ENST00000609587 ZNF839A8K0R7 811 aa5.84□□□□□ -1.47
SMCHD1-213ENST00000609587 COL6A1P12109 1028 aa5.84□□□□□ -1.47
SMCHD1-213ENST00000609587 MTMR1Q13613 665 aa5.84□□□□□ -1.47
SMCHD1-213ENST00000609587 LRRC32Q14392 662 aa5.84□□□□□ -1.47
SMCHD1-213ENST00000609587 SURF1Q15526 300 aa5.84□□□□□ -1.47
SMCHD1-213ENST00000609587 SKIDA1Q1XH10 827 aa5.84□□□□□ -1.47
SMCHD1-213ENST00000609587 PLEKHH3Q7Z736 793 aa5.84□□□□□ -1.47
SMCHD1-213ENST00000609587 RASSF3Q86WH2 238 aa5.84□□□□□ -1.47
SMCHD1-213ENST00000609587 ZCCHC14Q8WYQ9 949 aaKnown RBP5.84□□□□□ -1.47
SMCHD1-213ENST00000609587 RTF1Q92541 710 aaKnown RBP5.84□□□□□ -1.47
SMCHD1-213ENST00000609587 E2F7Q96AV8 911 aa5.84□□□□□ -1.47
SMCHD1-213ENST00000609587 MBD6Q96DN6 1003 aa5.84□□□□□ -1.47
SMCHD1-213ENST00000609587 AHCYL2Q96HN2 611 aaKnown RBP5.84□□□□□ -1.47
SMCHD1-213ENST00000609587 YTHDC1Q96MU7 727 aaKnown RBP5.84□□□□□ -1.47
SMCHD1-213ENST00000609587 TRIM8Q9BZR9 551 aa5.84□□□□□ -1.47
SMCHD1-213ENST00000609587 MS4A5Q9H3V2 200 aa5.84□□□□□ -1.47
SMCHD1-213ENST00000609587 L2HGDHQ9H9P8 463 aa5.84□□□□□ -1.47
SMCHD1-213ENST00000609587 VTA1Q9NP79 307 aa5.84□□□□□ -1.47
SMCHD1-213ENST00000609587 SLC39A2Q9NP94 309 aa5.84□□□□□ -1.47
SMCHD1-213ENST00000609587 BTBD7Q9P203 1132 aa5.84□□□□□ -1.47
SMCHD1-213ENST00000609587 C11orf21Q9P2W6 132 aa5.84□□□□□ -1.47
SMCHD1-213ENST00000609587 CROTQ9UKG9 612 aa5.84□□□□□ -1.47
SMCHD1-213ENST00000609587 NPEPPSL1A6NEC2 478 aa5.83□□□□□ -1.48
SMCHD1-213ENST00000609587 PATE3B3GLJ2 98 aa5.83□□□□□ -1.48
SMCHD1-213ENST00000609587 GOLGA6L22H0YM25 854 aa5.83□□□□□ -1.48
SMCHD1-213ENST00000609587 MUSKO15146 869 aa5.83□□□□□ -1.48
SMCHD1-213ENST00000609587 PTGS1P23219 599 aa5.83□□□□□ -1.48
SMCHD1-213ENST00000609587 FHL2Q14192 279 aa5.83□□□□□ -1.48
SMCHD1-213ENST00000609587 FRMD7Q6ZUT3 714 aa5.83□□□□□ -1.48
SMCHD1-213ENST00000609587 ZDHHC5Q9C0B5 715 aa5.83□□□□□ -1.48
SMCHD1-213ENST00000609587 CCDC8Q9H0W5 538 aaPredicted RBP5.83□□□□□ -1.48
SMCHD1-213ENST00000609587 KCND1Q9NSA2 647 aa5.83□□□□□ -1.48
SMCHD1-213ENST00000609587 UCKL1Q9NWZ5 548 aa5.83□□□□□ -1.48
SMCHD1-213ENST00000609587 ARHGAP20Q9P2F6 1191 aa5.83□□□□□ -1.48
SMCHD1-213ENST00000609587 UBA6A0AVT1 1052 aaPredicted RBP5.82□□□□□ -1.48
SMCHD1-213ENST00000609587 KDM1AO60341 852 aa5.82□□□□□ -1.48
SMCHD1-213ENST00000609587 KNG1P01042 644 aa5.82□□□□□ -1.48
SMCHD1-213ENST00000609587 S100BP04271 92 aaPredicted RBP5.82□□□□□ -1.48
SMCHD1-213ENST00000609587 MC4RP32245 332 aa5.82□□□□□ -1.48
SMCHD1-213ENST00000609587 EPHB4P54760 987 aa5.82□□□□□ -1.48
SMCHD1-213ENST00000609587 SYDE2Q5VT97 1194 aa5.82□□□□□ -1.48
SMCHD1-213ENST00000609587 RTN4RL1Q86UN2 441 aaPredicted RBP5.82□□□□□ -1.48
SMCHD1-213ENST00000609587 C7orf31Q8N865 590 aa5.82□□□□□ -1.48
SMCHD1-213ENST00000609587 FOXRED1Q96CU9 486 aaPredicted RBP5.82□□□□□ -1.48
SMCHD1-213ENST00000609587 SMAD5Q99717 465 aaKnown RBP5.82□□□□□ -1.48
SMCHD1-213ENST00000609587 ASPSCR1Q9BZE9 553 aa5.82□□□□□ -1.48
SMCHD1-213ENST00000609587 TMEM168Q9H0V1 697 aa5.82□□□□□ -1.48
SMCHD1-213ENST00000609587 DEF6Q9H4E7 631 aa5.82□□□□□ -1.48
SMCHD1-213ENST00000609587 TOPORSQ9NS56 1045 aaPredicted RBP5.82□□□□□ -1.48
SMCHD1-213ENST00000609587 USP36Q9P275 1121 aaKnown RBP5.82□□□□□ -1.48
SMCHD1-213ENST00000609587 MSRAQ9UJ68 235 aa5.82□□□□□ -1.48
SMCHD1-213ENST00000609587 ZFP69BQ9UJL9 534 aa5.82□□□□□ -1.48
SMCHD1-213ENST00000609587 TRHDEQ9UKU6 1024 aa5.82□□□□□ -1.48
SMCHD1-213ENST00000609587 WASHC2AQ641Q2 1341 aa5.81□□□□□ -1.48
SMCHD1-213ENST00000609587 LCHNA4D1U4 455 aa5.81□□□□□ -1.48
SMCHD1-213ENST00000609587 K7ESF4 209 aa5.81□□□□□ -1.48
SMCHD1-213ENST00000609587 KLHL18O94889 574 aa5.81□□□□□ -1.48
SMCHD1-213ENST00000609587 FBXO21O94952 628 aa5.81□□□□□ -1.48
SMCHD1-213ENST00000609587 MPIG6BO95866 241 aa5.81□□□□□ -1.48
SMCHD1-213ENST00000609587 IL18BPO95998 194 aa5.81□□□□□ -1.48
SMCHD1-213ENST00000609587 SMN1Q16637 294 aaKnown RBP5.81□□□□□ -1.48
SMCHD1-213ENST00000609587 TTC38Q5R3I4 469 aa5.81□□□□□ -1.48
SMCHD1-213ENST00000609587 TIGD7Q6NT04 549 aaPredicted RBP5.81□□□□□ -1.48
SMCHD1-213ENST00000609587 TRMT10BQ6PF06 316 aaKnown RBP5.81□□□□□ -1.48
SMCHD1-213ENST00000609587 PHYKPLQ8IUZ5 450 aa5.81□□□□□ -1.48
SMCHD1-213ENST00000609587 ZNF496Q96IT1 587 aaPredicted RBP5.81□□□□□ -1.48
SMCHD1-213ENST00000609587 TUBGCP5Q96RT8 1024 aa5.81□□□□□ -1.48
SMCHD1-213ENST00000609587 METTL14Q9HCE5 456 aaKnown RBP5.81□□□□□ -1.48
SMCHD1-213ENST00000609587 INCENPQ9NQS7 918 aa5.81□□□□□ -1.48
SMCHD1-213ENST00000609587 C14orf119Q9NWQ9 140 aa5.81□□□□□ -1.48
SMCHD1-213ENST00000609587 FTSJ1Q9UET6 329 aa5.81□□□□□ -1.48
SMCHD1-213ENST00000609587 TCAF1Q9Y4C2 921 aa5.81□□□□□ -1.48
SMCHD1-213ENST00000609587 GOLGA8AA7E2F4 631 aa5.8□□□□□ -1.48
SMCHD1-213ENST00000609587 GOLGA8BA8MQT2 603 aa5.8□□□□□ -1.48
SMCHD1-213ENST00000609587 NPIPB8E9PQR5 432 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms