RNA–Protein interactions for RNA: ENST00000609021.1

HDDC2-208, Transcript of HD domain containing 2, humanhuman

Gene HDDC2, Length 3,529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-208ENST00000609021 CAGE1Q8TC20 777 aa5.09□□□□□ -1.6
HDDC2-208ENST00000609021 ZNF473Q8WTR7 871 aaKnown RBP5.09□□□□□ -1.6
HDDC2-208ENST00000609021 PEX13Q92968 403 aa5.09□□□□□ -1.6
HDDC2-208ENST00000609021 MOGAT1Q96PD6 335 aa5.09□□□□□ -1.6
HDDC2-208ENST00000609021 TTPALQ9BTX7 342 aa5.09□□□□□ -1.6
HDDC2-208ENST00000609021 TUBB2BQ9BVA1 445 aa5.09□□□□□ -1.6
HDDC2-208ENST00000609021 EDEM3Q9BZQ6 932 aa5.09□□□□□ -1.6
HDDC2-208ENST00000609021 VPS37BQ9H9H4 285 aa5.09□□□□□ -1.6
HDDC2-208ENST00000609021 CABP1Q9NZU7 370 aa5.09□□□□□ -1.6
HDDC2-208ENST00000609021 CRNNQ9UBG3 495 aaPredicted RBP5.09□□□□□ -1.6
HDDC2-208ENST00000609021 HBS1LQ9Y450 684 aaKnown RBP5.09□□□□□ -1.6
HDDC2-208ENST00000609021 RGPD5Q99666 1765 aa5.08□□□□□ -1.6
HDDC2-208ENST00000609021 SSH2Q76I76 1423 aa5.08□□□□□ -1.6
HDDC2-208ENST00000609021 GOLGA8RI6L899 631 aa5.08□□□□□ -1.6
HDDC2-208ENST00000609021 RTCAO00442 366 aaKnown RBP5.08□□□□□ -1.6
HDDC2-208ENST00000609021 IDH3BO43837 385 aa5.08□□□□□ -1.6
HDDC2-208ENST00000609021 FARP2O94887 1054 aaPredicted RBP5.08□□□□□ -1.6
HDDC2-208ENST00000609021 BAG2O95816 211 aa5.08□□□□□ -1.6
HDDC2-208ENST00000609021 MYL3P08590 195 aa5.08□□□□□ -1.6
HDDC2-208ENST00000609021 VARSP26640 1264 aaKnown RBP5.08□□□□□ -1.6
HDDC2-208ENST00000609021 HDGFP51858 240 aaKnown RBP5.08□□□□□ -1.6
HDDC2-208ENST00000609021 PTK2Q05397 1052 aa5.08□□□□□ -1.6
HDDC2-208ENST00000609021 SPIDRQ14159 915 aa5.08□□□□□ -1.6
HDDC2-208ENST00000609021 TTLL12Q14166 644 aaPredicted RBP5.08□□□□□ -1.6
HDDC2-208ENST00000609021 KRT71Q3SY84 523 aa5.08□□□□□ -1.6
HDDC2-208ENST00000609021 FAM133BQ5BKY9 247 aaKnown RBP5.08□□□□□ -1.6
HDDC2-208ENST00000609021 ZNF362Q5T0B9 420 aaPredicted RBP5.08□□□□□ -1.6
HDDC2-208ENST00000609021 SPECC1LQ69YQ0 1117 aa5.08□□□□□ -1.6
HDDC2-208ENST00000609021 ATL3Q6DD88 541 aa5.08□□□□□ -1.6
HDDC2-208ENST00000609021 TTC23LQ6PF05 361 aa5.08□□□□□ -1.6
HDDC2-208ENST00000609021 RFPL4BQ6ZWI9 263 aa5.08□□□□□ -1.6
HDDC2-208ENST00000609021 PROSER2Q86WR7 435 aaPredicted RBP5.08□□□□□ -1.6
HDDC2-208ENST00000609021 NLGN1Q8N2Q7 840 aa5.08□□□□□ -1.6
HDDC2-208ENST00000609021 ZGPATQ8N5A5 531 aaKnown RBP5.08□□□□□ -1.6
HDDC2-208ENST00000609021 AADATQ8N5Z0 425 aa5.08□□□□□ -1.6
HDDC2-208ENST00000609021 PJA1Q8NG27 643 aa5.08□□□□□ -1.6
HDDC2-208ENST00000609021 AGAP11Q8TF27 550 aa5.08□□□□□ -1.6
HDDC2-208ENST00000609021 SLC16A10Q8TF71 515 aa5.08□□□□□ -1.6
HDDC2-208ENST00000609021 ATL1Q8WXF7 558 aa5.08□□□□□ -1.6
HDDC2-208ENST00000609021 STARD8Q92502 1023 aa5.08□□□□□ -1.6
HDDC2-208ENST00000609021 NMD3Q96D46 503 aaKnown RBP5.08□□□□□ -1.6
HDDC2-208ENST00000609021 CCT8L2Q96SF2 557 aa5.08□□□□□ -1.6
HDDC2-208ENST00000609021 TSEN34Q9BSV6 310 aaKnown RBP5.08□□□□□ -1.6
HDDC2-208ENST00000609021 OSBPL3Q9H4L5 887 aa5.08□□□□□ -1.6
HDDC2-208ENST00000609021 PLEKHA5Q9HAU0 1116 aa5.08□□□□□ -1.6
HDDC2-208ENST00000609021 CBX8Q9HC52 389 aa5.08□□□□□ -1.6
HDDC2-208ENST00000609021 STAP2Q9UGK3 403 aa5.08□□□□□ -1.6
HDDC2-208ENST00000609021 DMGDHQ9UI17 866 aaKnown RBP5.08□□□□□ -1.6
HDDC2-208ENST00000609021 SOX13Q9UN79 622 aa5.08□□□□□ -1.6
HDDC2-208ENST00000609021 AGAP1Q9UPQ3 857 aa5.08□□□□□ -1.6
HDDC2-208ENST00000609021 SSUH2Q9Y2M2 353 aa5.08□□□□□ -1.6
HDDC2-208ENST00000609021 CD2APQ9Y5K6 639 aa5.08□□□□□ -1.6
HDDC2-208ENST00000609021 NOX1Q9Y5S8 564 aa5.08□□□□□ -1.6
HDDC2-208ENST00000609021 LMTK3Q96Q04 1460 aa5.08□□□□□ -1.6
HDDC2-208ENST00000609021 A0A1W2PQ67 120 aa5.08□□□□□ -1.6
HDDC2-208ENST00000609021 OPLAHO14841 1288 aa5.08□□□□□ -1.6
HDDC2-208ENST00000609021 MCF2LO15068 1137 aa5.08□□□□□ -1.6
HDDC2-208ENST00000609021 SNPHO15079 494 aa5.08□□□□□ -1.6
HDDC2-208ENST00000609021 NVLO15381 856 aaKnown RBP5.08□□□□□ -1.6
HDDC2-208ENST00000609021 AP5Z1O43299 807 aa5.08□□□□□ -1.6
HDDC2-208ENST00000609021 HSF2BPO75031 334 aa5.08□□□□□ -1.6
HDDC2-208ENST00000609021 ASMTLO95671 621 aa5.08□□□□□ -1.6
HDDC2-208ENST00000609021 HLA-DRAP01903 254 aa5.08□□□□□ -1.6
HDDC2-208ENST00000609021 IFIT2P09913 472 aaKnown RBP5.08□□□□□ -1.6
HDDC2-208ENST00000609021 CBX5P45973 191 aa5.08□□□□□ -1.6
HDDC2-208ENST00000609021 GALK1P51570 392 aa5.08□□□□□ -1.6
HDDC2-208ENST00000609021 NLRP6P59044 892 aa5.08□□□□□ -1.6
HDDC2-208ENST00000609021 MLLT1Q03111 559 aaPredicted RBP5.08□□□□□ -1.6
HDDC2-208ENST00000609021 SGO2Q562F6 1265 aa5.08□□□□□ -1.6
HDDC2-208ENST00000609021 RILPL1Q5EBL4 403 aa5.08□□□□□ -1.6
HDDC2-208ENST00000609021 RBM20Q5T481 1227 aaKnown RBP5.08□□□□□ -1.6
HDDC2-208ENST00000609021 LSMEM2Q8N112 164 aa5.08□□□□□ -1.6
HDDC2-208ENST00000609021 LSMEM1Q8N8F7 131 aa5.08□□□□□ -1.6
HDDC2-208ENST00000609021 GOT1L1Q8NHS2 421 aaPredicted RBP5.08□□□□□ -1.6
HDDC2-208ENST00000609021 SGK3Q96BR1 496 aa5.08□□□□□ -1.6
HDDC2-208ENST00000609021 ITPKCQ96DU7 683 aa5.08□□□□□ -1.6
HDDC2-208ENST00000609021 CIB1Q99828 191 aa5.08□□□□□ -1.6
HDDC2-208ENST00000609021 SYT15Q9BQS2 421 aa5.08□□□□□ -1.6
HDDC2-208ENST00000609021 SRCIN1Q9C0H9 1055 aa5.08□□□□□ -1.6
HDDC2-208ENST00000609021 SUGCTQ9HAC7 445 aa5.08□□□□□ -1.6
HDDC2-208ENST00000609021 ATAD2Q6PL18 1390 aa5.08□□□□□ -1.6
HDDC2-208ENST00000609021 USP47Q96K76 1375 aa5.08□□□□□ -1.6
HDDC2-208ENST00000609021 IQSEC2Q5JU85 1478 aa5.08□□□□□ -1.6
HDDC2-208ENST00000609021 NHSL1Q5SYE7 1610 aa5.08□□□□□ -1.6
HDDC2-208ENST00000609021 TRAV6A0A075B6T7 132 aa5.07□□□□□ -1.6
HDDC2-208ENST00000609021 ARHGAP10A1A4S6 786 aa5.07□□□□□ -1.6
HDDC2-208ENST00000609021 SMIM23A6NLE4 172 aa5.07□□□□□ -1.6
HDDC2-208ENST00000609021 FBP2O00757 339 aa5.07□□□□□ -1.6
HDDC2-208ENST00000609021 CDK2AP1O14519 115 aa5.07□□□□□ -1.6
HDDC2-208ENST00000609021 PLSCR1O15162 318 aa5.07□□□□□ -1.6
HDDC2-208ENST00000609021 ATP5HO75947 161 aa5.07□□□□□ -1.6
HDDC2-208ENST00000609021 KRT6AP02538 564 aa5.07□□□□□ -1.6
HDDC2-208ENST00000609021 KRT6BP04259 564 aa5.07□□□□□ -1.6
HDDC2-208ENST00000609021 KCNA3P22001 575 aa5.07□□□□□ -1.6
HDDC2-208ENST00000609021 GGCXP38435 758 aa5.07□□□□□ -1.6
HDDC2-208ENST00000609021 CCNFP41002 786 aa5.07□□□□□ -1.6
HDDC2-208ENST00000609021 ATP1A2P50993 1020 aa5.07□□□□□ -1.6
HDDC2-208ENST00000609021 GSTO1P78417 241 aa5.07□□□□□ -1.6
HDDC2-208ENST00000609021 OASLQ15646 514 aaKnown RBP5.07□□□□□ -1.6
HDDC2-208ENST00000609021 BCL2A1Q16548 175 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms