RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 ORC3Q9UBD5 711 aaPredicted RBP21.72■■□□□ 1.07
SGMS1-208ENST00000608287 GVINP1Q7Z2Y8 2422 aa21.72■■□□□ 1.07
SGMS1-208ENST00000608287 NFASCO94856 1347 aa21.72■■□□□ 1.07
SGMS1-208ENST00000608287 FSCN2O14926 492 aa21.71■■□□□ 1.07
SGMS1-208ENST00000608287 XBP1P17861 261 aa21.71■■□□□ 1.07
SGMS1-208ENST00000608287 ITGB3BPQ13352 177 aaPredicted RBP21.71■■□□□ 1.07
SGMS1-208ENST00000608287 GALNT17Q6IS24 598 aa21.71■■□□□ 1.07
SGMS1-208ENST00000608287 RTN4RL1Q86UN2 441 aaPredicted RBP21.71■■□□□ 1.07
SGMS1-208ENST00000608287 FAM177A1Q8N128 213 aaPredicted RBP21.71■■□□□ 1.07
SGMS1-208ENST00000608287 PLCD3Q8N3E9 789 aa21.71■■□□□ 1.07
SGMS1-208ENST00000608287 SEMA4AQ9H3S1 761 aa21.71■■□□□ 1.07
SGMS1-208ENST00000608287 ENTPD7Q9NQZ7 604 aa21.71■■□□□ 1.07
SGMS1-208ENST00000608287 KCNJ14Q9UNX9 436 aa21.71■■□□□ 1.07
SGMS1-208ENST00000608287 PCDHGC5Q9Y5F6 944 aa21.71■■□□□ 1.07
SGMS1-208ENST00000608287 KDM3AQ9Y4C1 1321 aa21.71■■□□□ 1.07
SGMS1-208ENST00000608287 FNDC1Q4ZHG4 1894 aaPredicted RBP21.71■■□□□ 1.07
SGMS1-208ENST00000608287 IGLV3-22A0A075B6J6 115 aa21.7■■□□□ 1.06
SGMS1-208ENST00000608287 MARK3P27448 753 aa21.7■■□□□ 1.06
SGMS1-208ENST00000608287 PPM1AP35813 382 aa21.7■■□□□ 1.06
SGMS1-208ENST00000608287 MTHFRP42898 656 aa21.7■■□□□ 1.06
SGMS1-208ENST00000608287 KCNC3Q14003 757 aa21.7■■□□□ 1.06
SGMS1-208ENST00000608287 BMS1Q14692 1282 aaKnown RBP21.7■■□□□ 1.06
SGMS1-208ENST00000608287 CELF4Q9BZC1 486 aaKnown RBP21.7■■□□□ 1.06
SGMS1-208ENST00000608287 AZI2Q9H6S1 392 aa21.7■■□□□ 1.06
SGMS1-208ENST00000608287 MYO10Q9HD67 2058 aa21.7■■□□□ 1.06
SGMS1-208ENST00000608287 DENND3A2RUS2 1198 aa21.69■■□□□ 1.06
SGMS1-208ENST00000608287 TBKBP1A7MCY6 615 aa21.69■■□□□ 1.06
SGMS1-208ENST00000608287 DDX39AO00148 427 aaKnown RBP21.69■■□□□ 1.06
SGMS1-208ENST00000608287 BRD1O95696 1058 aa21.69■■□□□ 1.06
SGMS1-208ENST00000608287 SP100P23497 879 aaPredicted RBP21.69■■□□□ 1.06
SGMS1-208ENST00000608287 ACTR2P61160 394 aa21.69■■□□□ 1.06
SGMS1-208ENST00000608287 IGBP1P78318 339 aa21.69■■□□□ 1.06
SGMS1-208ENST00000608287 SETQ01105 290 aaPredicted RBP21.69■■□□□ 1.06
SGMS1-208ENST00000608287 PLCB3Q01970 1234 aa21.69■■□□□ 1.06
SGMS1-208ENST00000608287 KRT17Q04695 432 aa21.69■■□□□ 1.06
SGMS1-208ENST00000608287 PRR16Q569H4 304 aa21.69■■□□□ 1.06
SGMS1-208ENST00000608287 MARCH8Q5T0T0 291 aa21.69■■□□□ 1.06
SGMS1-208ENST00000608287 PLPP4Q5VZY2 271 aa21.69■■□□□ 1.06
SGMS1-208ENST00000608287 SYCE2Q6PIF2 218 aa21.69■■□□□ 1.06
SGMS1-208ENST00000608287 TDRD5Q8NAT2 981 aaKnown RBP21.69■■□□□ 1.06
SGMS1-208ENST00000608287 COLGALT1Q8NBJ5 622 aa21.69■■□□□ 1.06
SGMS1-208ENST00000608287 DAGLBQ8NCG7 672 aa21.69■■□□□ 1.06
SGMS1-208ENST00000608287 TBCKQ8TEA7 893 aa21.69■■□□□ 1.06
SGMS1-208ENST00000608287 MRPS27Q92552 414 aaKnown RBP21.69■■□□□ 1.06
SGMS1-208ENST00000608287 WASF1Q92558 559 aa21.69■■□□□ 1.06
SGMS1-208ENST00000608287 KIF2CQ99661 725 aa21.69■■□□□ 1.06
SGMS1-208ENST00000608287 TCF25Q9BQ70 676 aa21.69■■□□□ 1.06
SGMS1-208ENST00000608287 ZNF577Q9BSK1 485 aa21.69■■□□□ 1.06
SGMS1-208ENST00000608287 PHF20Q9BVI0 1012 aa21.69■■□□□ 1.06
SGMS1-208ENST00000608287 UPF2Q9HAU5 1272 aaKnown RBP21.69■■□□□ 1.06
SGMS1-208ENST00000608287 LIMCH1Q9UPQ0 1083 aa21.69■■□□□ 1.06
SGMS1-208ENST00000608287 PCDHA2Q9Y5H9 948 aa21.69■■□□□ 1.06
SGMS1-208ENST00000608287 LOXHD1Q8IVV2 1947 aa21.68■■□□□ 1.06
SGMS1-208ENST00000608287 IPO5O00410 1097 aaKnown RBP21.68■■□□□ 1.06
SGMS1-208ENST00000608287 CIITAP33076 1130 aa21.68■■□□□ 1.06
SGMS1-208ENST00000608287 RBM25P49756 843 aaKnown RBP21.68■■□□□ 1.06
SGMS1-208ENST00000608287 ERVFC1P60507 584 aa21.68■■□□□ 1.06
SGMS1-208ENST00000608287 RBM10P98175 930 aaKnown RBP21.68■■□□□ 1.06
SGMS1-208ENST00000608287 NPY5RQ15761 445 aa21.68■■□□□ 1.06
SGMS1-208ENST00000608287 NSUN7Q8NE18 718 aaKnown RBP21.68■■□□□ 1.06
SGMS1-208ENST00000608287 ADAM7Q9H2U9 754 aa21.68■■□□□ 1.06
SGMS1-208ENST00000608287 GJB4Q9NTQ9 266 aa21.68■■□□□ 1.06
SGMS1-208ENST00000608287 MYO15AQ9UKN7 3530 aa21.68■■□□□ 1.06
SGMS1-208ENST00000608287 M0R2N6 131 aa21.67■■□□□ 1.06
SGMS1-208ENST00000608287 HOXA2O43364 376 aa21.67■■□□□ 1.06
SGMS1-208ENST00000608287 USP11P51784 963 aa21.67■■□□□ 1.06
SGMS1-208ENST00000608287 KRT76Q01546 638 aa21.67■■□□□ 1.06
SGMS1-208ENST00000608287 NFX1Q12986 1120 aaKnown RBP21.67■■□□□ 1.06
SGMS1-208ENST00000608287 LLGL2Q6P1M3 1020 aa21.67■■□□□ 1.06
SGMS1-208ENST00000608287 SLC24A5Q71RS6 500 aa21.67■■□□□ 1.06
SGMS1-208ENST00000608287 ZDHHC14Q8IZN3 488 aa21.67■■□□□ 1.06
SGMS1-208ENST00000608287 RTP3Q9BQQ7 232 aa21.67■■□□□ 1.06
SGMS1-208ENST00000608287 USTQ9Y2C2 406 aa21.67■■□□□ 1.06
SGMS1-208ENST00000608287 C2CD4DB7Z1M9 353 aa21.66■■□□□ 1.06
SGMS1-208ENST00000608287 JAK2O60674 1132 aa21.66■■□□□ 1.06
SGMS1-208ENST00000608287 FDPSP14324 419 aaKnown RBP21.66■■□□□ 1.06
SGMS1-208ENST00000608287 INSRRP14616 1297 aa21.66■■□□□ 1.06
SGMS1-208ENST00000608287 DGLUCYQ7Z3D6 616 aa21.66■■□□□ 1.06
SGMS1-208ENST00000608287 KRT25Q7Z3Z0 450 aa21.66■■□□□ 1.06
SGMS1-208ENST00000608287 TBC1D22BQ9NU19 505 aa21.66■■□□□ 1.06
SGMS1-208ENST00000608287 SMIM35A0A1B0GVV1 85 aa21.65■■□□□ 1.06
SGMS1-208ENST00000608287 DHX15O43143 795 aaKnown RBP21.65■■□□□ 1.06
SGMS1-208ENST00000608287 EDIL3O43854 480 aa21.65■■□□□ 1.06
SGMS1-208ENST00000608287 CCNE2O96020 404 aa21.65■■□□□ 1.06
SGMS1-208ENST00000608287 GATMP50440 423 aa21.65■■□□□ 1.06
SGMS1-208ENST00000608287 NONOQ15233 471 aaKnown RBP eCLIP21.65■■□□□ 1.066e-7■■■□□ 17.6
SGMS1-208ENST00000608287 PCYT2Q99447 389 aa21.65■■□□□ 1.06
SGMS1-208ENST00000608287 APOL5Q9BWW9 433 aa21.65■■□□□ 1.06
SGMS1-208ENST00000608287 ELAC1Q9H777 363 aaKnown RBP21.65■■□□□ 1.06
SGMS1-208ENST00000608287 ATP6V0A4Q9HBG4 840 aa21.65■■□□□ 1.06
SGMS1-208ENST00000608287 RGS18Q9NS28 235 aa21.65■■□□□ 1.06
SGMS1-208ENST00000608287 TYW1Q9NV66 732 aaKnown RBP21.65■■□□□ 1.06
SGMS1-208ENST00000608287 TCEAL9Q9UHQ7 104 aa21.65■■□□□ 1.06
SGMS1-208ENST00000608287 CCDC194A0A1B0GVG4 234 aa21.64■■□□□ 1.05
SGMS1-208ENST00000608287 GPR182O15218 404 aa21.64■■□□□ 1.05
SGMS1-208ENST00000608287 RPS6KA5O75582 802 aa21.64■■□□□ 1.05
SGMS1-208ENST00000608287 IBSPP21815 317 aaPredicted RBP21.64■■□□□ 1.05
SGMS1-208ENST00000608287 TMEM62Q0P6H9 643 aa21.64■■□□□ 1.05
SGMS1-208ENST00000608287 ST3GAL1Q11201 340 aa21.64■■□□□ 1.05
SGMS1-208ENST00000608287 SMC1AQ14683 1233 aaKnown RBP21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms