RNA–Protein interactions for RNA: ENST00000606878.1

LINC00240-203, long intergenic non-protein coding RNA 240, humanhuman

TSL 1 (best)

Gene LINC00240, Length 927 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-203ENST00000606878 RAB34Q9BZG1 259 aa18.49■□□□□ 0.55
LINC00240-203ENST00000606878 INO80BQ9C086 356 aaPredicted RBP18.49■□□□□ 0.55
LINC00240-203ENST00000606878 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.49■□□□□ 0.55
LINC00240-203ENST00000606878 STK24Q9Y6E0 443 aa18.49■□□□□ 0.55
LINC00240-203ENST00000606878 LINC01553A4QN01 128 aa18.48■□□□□ 0.55
LINC00240-203ENST00000606878 ASAP2O43150 1006 aa18.48■□□□□ 0.55
LINC00240-203ENST00000606878 GAS2O43903 313 aaKnown RBP18.48■□□□□ 0.55
LINC00240-203ENST00000606878 SPATA31C1P0DKV0 1188 aa18.48■□□□□ 0.55
LINC00240-203ENST00000606878 ZSCAN20P17040 1043 aaPredicted RBP18.48■□□□□ 0.55
LINC00240-203ENST00000606878 IGFBP4P22692 258 aa18.48■□□□□ 0.55
LINC00240-203ENST00000606878 RPA1P27694 616 aa18.48■□□□□ 0.55
LINC00240-203ENST00000606878 DTHD1Q6ZMT9 781 aa18.48■□□□□ 0.55
LINC00240-203ENST00000606878 ZNF410Q86VK4 478 aa18.48■□□□□ 0.55
LINC00240-203ENST00000606878 SP7Q8TDD2 431 aaPredicted RBP18.48■□□□□ 0.55
LINC00240-203ENST00000606878 PRPF31Q8WWY3 499 aaKnown RBP18.48■□□□□ 0.55
LINC00240-203ENST00000606878 SNX21Q969T3 373 aa18.48■□□□□ 0.55
LINC00240-203ENST00000606878 TMEM143Q96AN5 459 aa18.48■□□□□ 0.55
LINC00240-203ENST00000606878 TGS1Q96RS0 853 aaKnown RBP18.48■□□□□ 0.55
LINC00240-203ENST00000606878 RGS18Q9NS28 235 aa18.48■□□□□ 0.55
LINC00240-203ENST00000606878 C1orf112Q9NSG2 853 aa18.48■□□□□ 0.55
LINC00240-203ENST00000606878 LRWD1Q9UFC0 647 aa18.48■□□□□ 0.55
LINC00240-203ENST00000606878 LRFN2Q9ULH4 789 aa18.48■□□□□ 0.55
LINC00240-203ENST00000606878 A0A087WZ62 844 aa18.47■□□□□ 0.55
LINC00240-203ENST00000606878 ARHGEF15O94989 841 aa18.47■□□□□ 0.55
LINC00240-203ENST00000606878 PRPHP41219 470 aa18.47■□□□□ 0.55
LINC00240-203ENST00000606878 ERVK-21P61565 698 aa18.47■□□□□ 0.55
LINC00240-203ENST00000606878 SLC24A5Q71RS6 500 aa18.47■□□□□ 0.55
LINC00240-203ENST00000606878 NPAS4Q8IUM7 802 aa18.47■□□□□ 0.55
LINC00240-203ENST00000606878 MAFAQ8NHW3 353 aaPredicted RBP18.47■□□□□ 0.55
LINC00240-203ENST00000606878 PIGOQ8TEQ8 1089 aa18.47■□□□□ 0.55
LINC00240-203ENST00000606878 PSPC1Q8WXF1 523 aaKnown RBP18.47■□□□□ 0.55
LINC00240-203ENST00000606878 LINC01599Q8WXQ3 324 aa18.47■□□□□ 0.55
LINC00240-203ENST00000606878 MTRQ99707 1265 aa18.47■□□□□ 0.55
LINC00240-203ENST00000606878 FDXACB1Q9BRP7 624 aaPredicted RBP18.47■□□□□ 0.55
LINC00240-203ENST00000606878 PCDHB7Q9Y5E2 793 aa18.47■□□□□ 0.55
LINC00240-203ENST00000606878 A0A087WWV3 80 aa18.46■□□□□ 0.55
LINC00240-203ENST00000606878 MED24O75448 989 aa18.46■□□□□ 0.55
LINC00240-203ENST00000606878 DGAT1O75907 488 aa18.46■□□□□ 0.55
LINC00240-203ENST00000606878 SRGAP2CP0DJJ0 459 aa18.46■□□□□ 0.55
LINC00240-203ENST00000606878 MUTP22033 750 aa18.46■□□□□ 0.55
LINC00240-203ENST00000606878 SARSP49591 514 aaKnown RBP18.46■□□□□ 0.55
LINC00240-203ENST00000606878 RARRES1P49788 294 aa18.46■□□□□ 0.55
LINC00240-203ENST00000606878 EMC2Q15006 297 aa18.46■□□□□ 0.55
LINC00240-203ENST00000606878 HAUS3Q68CZ6 603 aa18.46■□□□□ 0.55
LINC00240-203ENST00000606878 BRAPQ7Z569 592 aa18.46■□□□□ 0.55
LINC00240-203ENST00000606878 KSR1Q8IVT5 923 aa18.46■□□□□ 0.55
LINC00240-203ENST00000606878 FIBCD1Q8N539 461 aa18.46■□□□□ 0.55
LINC00240-203ENST00000606878 NLRP4Q96MN2 994 aa18.46■□□□□ 0.55
LINC00240-203ENST00000606878 COL4A3BPQ9Y5P4 624 aa18.46■□□□□ 0.55
LINC00240-203ENST00000606878 WDR81Q562E7 1941 aa18.45■□□□□ 0.54
LINC00240-203ENST00000606878 VPS37CA5D8V6 355 aaPredicted RBP18.45■□□□□ 0.54
LINC00240-203ENST00000606878 RFXAPO00287 272 aa18.45■□□□□ 0.54
LINC00240-203ENST00000606878 GTPBP6O43824 516 aaPredicted RBP18.45■□□□□ 0.54
LINC00240-203ENST00000606878 MGEA5O60502 916 aa18.45■□□□□ 0.54
LINC00240-203ENST00000606878 DGKIO75912 1065 aa18.45■□□□□ 0.54
LINC00240-203ENST00000606878 IBSPP21815 317 aaPredicted RBP18.45■□□□□ 0.54
LINC00240-203ENST00000606878 CCT6AP40227 531 aaKnown RBP18.45■□□□□ 0.54
LINC00240-203ENST00000606878 FAM189BP81408 668 aa18.45■□□□□ 0.54
LINC00240-203ENST00000606878 LAMTOR4Q0VGL1 99 aa18.45■□□□□ 0.54
LINC00240-203ENST00000606878 ADGRE1Q14246 886 aa18.45■□□□□ 0.54
LINC00240-203ENST00000606878 DSC3Q14574 896 aa18.45■□□□□ 0.54
LINC00240-203ENST00000606878 MXD4Q14582 209 aaPredicted RBP18.45■□□□□ 0.54
LINC00240-203ENST00000606878 CRIPAKQ8N1N5 446 aa18.45■□□□□ 0.54
LINC00240-203ENST00000606878 SAMD11Q96NU1 681 aa18.45■□□□□ 0.54
LINC00240-203ENST00000606878 ATP6V0A4Q9HBG4 840 aa18.45■□□□□ 0.54
LINC00240-203ENST00000606878 CHST12Q9NRB3 414 aa18.45■□□□□ 0.54
LINC00240-203ENST00000606878 BMP2KQ9NSY1 1161 aaPredicted RBP18.45■□□□□ 0.54
LINC00240-203ENST00000606878 DBR1Q9UK59 544 aaKnown RBP18.45■□□□□ 0.54
LINC00240-203ENST00000606878 MTUS1Q9ULD2 1270 aa18.45■□□□□ 0.54
LINC00240-203ENST00000606878 C9IYK1 514 aa18.44■□□□□ 0.54
LINC00240-203ENST00000606878 CSDE1O75534 798 aaKnown RBP18.44■□□□□ 0.54
LINC00240-203ENST00000606878 SFPQP23246 707 aaKnown RBP eCLIP18.44■□□□□ 0.54
LINC00240-203ENST00000606878 BTG3Q14201 252 aaPredicted RBP18.44■□□□□ 0.54
LINC00240-203ENST00000606878 KRT79Q5XKE5 535 aa18.44■□□□□ 0.54
LINC00240-203ENST00000606878 FERMT3Q86UX7 667 aa18.44■□□□□ 0.54
LINC00240-203ENST00000606878 IGSF22Q8N9C0 903 aa18.44■□□□□ 0.54
LINC00240-203ENST00000606878 FOXD4L1Q9NU39 408 aa18.44■□□□□ 0.54
LINC00240-203ENST00000606878 DACT1Q9NYF0 836 aa18.44■□□□□ 0.54
LINC00240-203ENST00000606878 TTC3P53804 2025 aa18.44■□□□□ 0.54
LINC00240-203ENST00000606878 MICAL3Q7RTP6 2002 aa18.44■□□□□ 0.54
LINC00240-203ENST00000606878 POU3F3P20264 500 aaPredicted RBP18.43■□□□□ 0.54
LINC00240-203ENST00000606878 SYT1P21579 422 aa18.43■□□□□ 0.54
LINC00240-203ENST00000606878 FGFR4P22455 802 aa18.43■□□□□ 0.54
LINC00240-203ENST00000606878 ATP2C1P98194 919 aaPredicted RBP18.43■□□□□ 0.54
LINC00240-203ENST00000606878 IL17AQ16552 155 aa18.43■□□□□ 0.54
LINC00240-203ENST00000606878 ARL6IP4Q66PJ3 421 aaKnown RBP18.43■□□□□ 0.54
LINC00240-203ENST00000606878 POTEGQ6S5H5 508 aa18.43■□□□□ 0.54
LINC00240-203ENST00000606878 SRGAP1Q7Z6B7 1085 aa18.43■□□□□ 0.54
LINC00240-203ENST00000606878 HSCBQ8IWL3 235 aa18.43■□□□□ 0.54
LINC00240-203ENST00000606878 ZNF689Q96CS4 500 aaPredicted RBP18.43■□□□□ 0.54
LINC00240-203ENST00000606878 C17orf80Q9BSJ5 609 aa18.43■□□□□ 0.54
LINC00240-203ENST00000606878 ELAC1Q9H777 363 aaKnown RBP18.43■□□□□ 0.54
LINC00240-203ENST00000606878 IFT122Q9HBG6 1241 aa18.43■□□□□ 0.54
LINC00240-203ENST00000606878 XPNPEP1Q9NQW7 623 aa18.43■□□□□ 0.54
LINC00240-203ENST00000606878 KIAA1024Q9UPX6 916 aa18.43■□□□□ 0.54
LINC00240-203ENST00000606878 EPOPA6NHQ4 379 aa18.42■□□□□ 0.54
LINC00240-203ENST00000606878 BMP15O95972 392 aa18.42■□□□□ 0.54
LINC00240-203ENST00000606878 ARL2P36404 184 aa18.42■□□□□ 0.54
LINC00240-203ENST00000606878 GRB10Q13322 594 aa18.42■□□□□ 0.54
LINC00240-203ENST00000606878 TFDP1Q14186 410 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms