RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 ZNF365Q70YC5 407 aa15.43■□□□□ 0.06
RNF40-212ENST00000602784 DEFB128Q7Z7B8 93 aa15.43■□□□□ 0.06
RNF40-212ENST00000602784 ZNF410Q86VK4 478 aa15.43■□□□□ 0.06
RNF40-212ENST00000602784 SYT2Q8N9I0 419 aaPredicted RBP15.43■□□□□ 0.06
RNF40-212ENST00000602784 TMEM143Q96AN5 459 aa15.43■□□□□ 0.06
RNF40-212ENST00000602784 SPATA32Q96LK8 384 aa15.43■□□□□ 0.06
RNF40-212ENST00000602784 KCND2Q9NZV8 630 aa15.43■□□□□ 0.06
RNF40-212ENST00000602784 USO1O60763 962 aaKnown RBP15.42■□□□□ 0.06
RNF40-212ENST00000602784 ACRP10323 421 aa15.42■□□□□ 0.06
RNF40-212ENST00000602784 ACTN1P12814 892 aa15.42■□□□□ 0.06
RNF40-212ENST00000602784 PLCG1P19174 1290 aa15.42■□□□□ 0.06
RNF40-212ENST00000602784 ARL2P36404 184 aa15.42■□□□□ 0.06
RNF40-212ENST00000602784 GPC3P51654 580 aa15.42■□□□□ 0.06
RNF40-212ENST00000602784 POU5F1BQ06416 359 aa15.42■□□□□ 0.06
RNF40-212ENST00000602784 LPIN1Q14693 890 aa15.42■□□□□ 0.06
RNF40-212ENST00000602784 KIZQ2M2Z5 673 aa15.42■□□□□ 0.06
RNF40-212ENST00000602784 ODR4Q5SWX8 454 aa15.42■□□□□ 0.06
RNF40-212ENST00000602784 RASIP1Q5U651 963 aa15.42■□□□□ 0.06
RNF40-212ENST00000602784 ADALQ6DHV7 355 aa15.42■□□□□ 0.06
RNF40-212ENST00000602784 CNKSR3Q6P9H4 555 aa15.42■□□□□ 0.06
RNF40-212ENST00000602784 CCDC73Q6ZRK6 1079 aa15.42■□□□□ 0.06
RNF40-212ENST00000602784 TDHQ8IZJ6 230 aa15.42■□□□□ 0.06
RNF40-212ENST00000602784 RASSF8Q8NHQ8 419 aa15.42■□□□□ 0.06
RNF40-212ENST00000602784 HERVK_113Q902F9 699 aa15.42■□□□□ 0.06
RNF40-212ENST00000602784 SEPT8Q92599 483 aa15.42■□□□□ 0.06
RNF40-212ENST00000602784 APBB2Q92870 758 aa15.42■□□□□ 0.06
RNF40-212ENST00000602784 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.42■□□□□ 0.06
RNF40-212ENST00000602784 TIPINQ9BVW5 301 aa15.42■□□□□ 0.06
RNF40-212ENST00000602784 MTIF3Q9H2K0 278 aaKnown RBP15.42■□□□□ 0.06
RNF40-212ENST00000602784 CDHR5Q9HBB8 845 aa15.42■□□□□ 0.06
RNF40-212ENST00000602784 BLOC1S4Q9NUP1 217 aa15.42■□□□□ 0.06
RNF40-212ENST00000602784 STK17AQ9UEE5 414 aa15.42■□□□□ 0.06
RNF40-212ENST00000602784 COL4A3BPQ9Y5P4 624 aa15.42■□□□□ 0.06
RNF40-212ENST00000602784 SCN5AQ14524 2016 aa15.42■□□□□ 0.06
RNF40-212ENST00000602784 RANBP2P49792 3224 aaKnown RBP15.41■□□□□ 0.06
RNF40-212ENST00000602784 TET1Q8NFU7 2136 aa15.41■□□□□ 0.06
RNF40-212ENST00000602784 ABHD14A-ACY1A0A1B0GW23 586 aa15.41■□□□□ 0.06
RNF40-212ENST00000602784 EFCAB14O75071 495 aa15.41■□□□□ 0.06
RNF40-212ENST00000602784 BAIAP3O94812 1187 aa15.41■□□□□ 0.06
RNF40-212ENST00000602784 PLA2G4BP0C869 781 aa15.41■□□□□ 0.06
RNF40-212ENST00000602784 GHRP10912 638 aa15.41■□□□□ 0.06
RNF40-212ENST00000602784 EIF4BP23588 611 aaKnown RBP15.41■□□□□ 0.06
RNF40-212ENST00000602784 SLC12A3P55017 1021 aa15.41■□□□□ 0.06
RNF40-212ENST00000602784 LAMTOR4Q0VGL1 99 aa15.41■□□□□ 0.06
RNF40-212ENST00000602784 SHHQ15465 462 aa15.41■□□□□ 0.06
RNF40-212ENST00000602784 RRAGBQ5VZM2 374 aa15.41■□□□□ 0.06
RNF40-212ENST00000602784 RINT1Q6NUQ1 792 aa15.41■□□□□ 0.06
RNF40-212ENST00000602784 SHC4Q6S5L8 630 aa15.41■□□□□ 0.06
RNF40-212ENST00000602784 C1orf186Q6ZWK4 172 aa15.41■□□□□ 0.06
RNF40-212ENST00000602784 RHPN2Q8IUC4 686 aa15.41■□□□□ 0.06
RNF40-212ENST00000602784 RAD54LQ92698 747 aa15.41■□□□□ 0.06
RNF40-212ENST00000602784 KIFAP3Q92845 792 aa15.41■□□□□ 0.06
RNF40-212ENST00000602784 PLIN2Q99541 437 aa15.41■□□□□ 0.06
RNF40-212ENST00000602784 IFIH1Q9BYX4 1025 aaKnown RBP15.41■□□□□ 0.06
RNF40-212ENST00000602784 OSBPL7Q9BZF2 842 aa15.41■□□□□ 0.06
RNF40-212ENST00000602784 INO80BQ9C086 356 aaPredicted RBP15.41■□□□□ 0.06
RNF40-212ENST00000602784 COLQQ9Y215 455 aaPredicted RBP15.41■□□□□ 0.06
RNF40-212ENST00000602784 TCHHQ07283 1943 aa15.41■□□□□ 0.06
RNF40-212ENST00000602784 GPR182O15218 404 aa15.4■□□□□ 0.06
RNF40-212ENST00000602784 DARSP14868 501 aaKnown RBP15.4■□□□□ 0.06
RNF40-212ENST00000602784 CMA1P23946 247 aa15.4■□□□□ 0.06
RNF40-212ENST00000602784 GUCY2CP25092 1073 aa15.4■□□□□ 0.06
RNF40-212ENST00000602784 IKBKEQ14164 716 aa15.4■□□□□ 0.06
RNF40-212ENST00000602784 TFDP1Q14186 410 aa15.4■□□□□ 0.06
RNF40-212ENST00000602784 C9orf50Q5SZB4 431 aa15.4■□□□□ 0.06
RNF40-212ENST00000602784 RESP18Q5W5W9 173 aa15.4■□□□□ 0.06
RNF40-212ENST00000602784 DBF4BQ8NFT6 615 aa15.4■□□□□ 0.06
RNF40-212ENST00000602784 TMEM40Q8WWA1 233 aa15.4■□□□□ 0.06
RNF40-212ENST00000602784 NLRP7Q8WX94 980 aa15.4■□□□□ 0.06
RNF40-212ENST00000602784 LARP4BQ92615 738 aaKnown RBP15.4■□□□□ 0.06
RNF40-212ENST00000602784 CHAMP1Q96JM3 812 aa15.4■□□□□ 0.06
RNF40-212ENST00000602784 OSMRQ99650 979 aa15.4■□□□□ 0.06
RNF40-212ENST00000602784 NFKBIZQ9BYH8 718 aa15.4■□□□□ 0.06
RNF40-212ENST00000602784 GCOM2Q9BZD3 368 aaPredicted RBP15.4■□□□□ 0.06
RNF40-212ENST00000602784 POLR3FQ9H1D9 316 aaPredicted RBP15.4■□□□□ 0.06
RNF40-212ENST00000602784 AGO3Q9H9G7 860 aaKnown RBP15.4■□□□□ 0.06
RNF40-212ENST00000602784 BMP2KQ9NSY1 1161 aaPredicted RBP15.4■□□□□ 0.06
RNF40-212ENST00000602784 PADI3Q9ULW8 664 aa15.4■□□□□ 0.06
RNF40-212ENST00000602784 GINS2Q9Y248 185 aa15.4■□□□□ 0.06
RNF40-212ENST00000602784 SIP14410 1827 aa15.4■□□□□ 0.06
RNF40-212ENST00000602784 A0A087WZ62 844 aa15.39■□□□□ 0.05
RNF40-212ENST00000602784 RPS6KA5O75582 802 aa15.39■□□□□ 0.05
RNF40-212ENST00000602784 GLRA2P23416 452 aa15.39■□□□□ 0.05
RNF40-212ENST00000602784 PCBP1Q15365 356 aaKnown RBP eCLIP15.39■□□□□ 0.052e-8■■■■■ 47.3
RNF40-212ENST00000602784 NAALADL2Q58DX5 795 aa15.39■□□□□ 0.05
RNF40-212ENST00000602784 FAM102BQ5T8I3 360 aa15.39■□□□□ 0.05
RNF40-212ENST00000602784 OTOP2Q7RTS6 562 aa15.39■□□□□ 0.05
RNF40-212ENST00000602784 SRGAP1Q7Z6B7 1085 aa15.39■□□□□ 0.05
RNF40-212ENST00000602784 IFNLR1Q8IU57 520 aaPredicted RBP15.39■□□□□ 0.05
RNF40-212ENST00000602784 KSR1Q8IVT5 923 aa15.39■□□□□ 0.05
RNF40-212ENST00000602784 LRRC15Q8TF66 581 aa15.39■□□□□ 0.05
RNF40-212ENST00000602784 SCLT1Q96NL6 688 aa15.39■□□□□ 0.05
RNF40-212ENST00000602784 FDXACB1Q9BRP7 624 aaPredicted RBP15.39■□□□□ 0.05
RNF40-212ENST00000602784 PYM1Q9BRP8 204 aaKnown RBP15.39■□□□□ 0.05
RNF40-212ENST00000602784 RUSC1Q9BVN2 902 aa15.39■□□□□ 0.05
RNF40-212ENST00000602784 FTHL17Q9BXU8 183 aa15.39■□□□□ 0.05
RNF40-212ENST00000602784 CUEDC2Q9H467 287 aa15.39■□□□□ 0.05
RNF40-212ENST00000602784 C17orf75Q9HAS0 396 aa15.39■□□□□ 0.05
RNF40-212ENST00000602784 IFT122Q9HBG6 1241 aa15.39■□□□□ 0.05
RNF40-212ENST00000602784 FAM13BQ9NYF5 915 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms