RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 TBC1D8BQ0IIM8 1120 aa19.83■□□□□ 0.76
VRK3-225ENST00000601912 EDRF1Q3B7T1 1238 aa19.83■□□□□ 0.76
VRK3-225ENST00000601912 TRIM44Q96DX7 344 aaPredicted RBP19.83■□□□□ 0.76
VRK3-225ENST00000601912 JPH2Q9BR39 696 aaPredicted RBP19.83■□□□□ 0.76
VRK3-225ENST00000601912 ST6GALNAC4Q9H4F1 302 aa19.83■□□□□ 0.76
VRK3-225ENST00000601912 TYW1Q9NV66 732 aaKnown RBP19.83■□□□□ 0.76
VRK3-225ENST00000601912 LIMA1Q9UHB6 759 aaKnown RBP19.83■□□□□ 0.76
VRK3-225ENST00000601912 TRAF3IP3Q9Y228 551 aa19.83■□□□□ 0.76
VRK3-225ENST00000601912 Q9Y3F1 56 aa19.83■□□□□ 0.76
VRK3-225ENST00000601912 CCDC169A6NNP5 214 aa19.82■□□□□ 0.76
VRK3-225ENST00000601912 ADCY6O43306 1168 aa19.82■□□□□ 0.76
VRK3-225ENST00000601912 MAFO75444 373 aaPredicted RBP19.82■□□□□ 0.76
VRK3-225ENST00000601912 HOXD8P13378 290 aaPredicted RBP19.82■□□□□ 0.76
VRK3-225ENST00000601912 AKR1A1P14550 325 aa19.82■□□□□ 0.76
VRK3-225ENST00000601912 ZC2HC1CQ53FD0 456 aaPredicted RBP19.82■□□□□ 0.76
VRK3-225ENST00000601912 BRDTQ58F21 947 aaPredicted RBP19.82■□□□□ 0.76
VRK3-225ENST00000601912 TLK2Q86UE8 772 aa19.82■□□□□ 0.76
VRK3-225ENST00000601912 SPIRE2Q8WWL2 714 aa19.82■□□□□ 0.76
VRK3-225ENST00000601912 CEP89Q96ST8 783 aa19.82■□□□□ 0.76
VRK3-225ENST00000601912 AP5M1Q9H0R1 490 aa19.82■□□□□ 0.76
VRK3-225ENST00000601912 POLR3FQ9H1D9 316 aaPredicted RBP19.82■□□□□ 0.76
VRK3-225ENST00000601912 LRRC10BA6NIK2 292 aa19.81■□□□□ 0.76
VRK3-225ENST00000601912 GPR25O00155 361 aa19.81■□□□□ 0.76
VRK3-225ENST00000601912 GAS2O43903 313 aaKnown RBP19.81■□□□□ 0.76
VRK3-225ENST00000601912 TPM2P07951 284 aa19.81■□□□□ 0.76
VRK3-225ENST00000601912 HOXD13P35453 343 aa19.81■□□□□ 0.76
VRK3-225ENST00000601912 NCKAP1LP55160 1127 aa19.81■□□□□ 0.76
VRK3-225ENST00000601912 KRT31Q15323 416 aa19.81■□□□□ 0.76
VRK3-225ENST00000601912 HAUS6Q7Z4H7 955 aa19.81■□□□□ 0.76
VRK3-225ENST00000601912 IRF2BP1Q8IU81 584 aa19.81■□□□□ 0.76
VRK3-225ENST00000601912 SPC24Q8NBT2 197 aa19.81■□□□□ 0.76
VRK3-225ENST00000601912 TRIB2Q92519 343 aa19.81■□□□□ 0.76
VRK3-225ENST00000601912 CEP63Q96MT8 703 aa19.81■□□□□ 0.76
VRK3-225ENST00000601912 NAP1L5Q96NT1 182 aaPredicted RBP19.81■□□□□ 0.76
VRK3-225ENST00000601912 NTPCRQ9BSD7 190 aaKnown RBP19.81■□□□□ 0.76
VRK3-225ENST00000601912 STRA6Q9BX79 667 aa19.81■□□□□ 0.76
VRK3-225ENST00000601912 TMEM206Q9H813 350 aa19.81■□□□□ 0.76
VRK3-225ENST00000601912 KMT5AQ9NQR1 393 aa19.81■□□□□ 0.76
VRK3-225ENST00000601912 A6NJR5 290 aa19.81■□□□□ 0.76
VRK3-225ENST00000601912 H0YCG3 227 aa19.81■□□□□ 0.76
VRK3-225ENST00000601912 H3BRB1 525 aa19.81■□□□□ 0.76
VRK3-225ENST00000601912 SLC16A4O15374 487 aa19.81■□□□□ 0.76
VRK3-225ENST00000601912 PPP1R37O75864 691 aa19.81■□□□□ 0.76
VRK3-225ENST00000601912 GNRH1P01148 92 aa19.81■□□□□ 0.76
VRK3-225ENST00000601912 RPL13P26373 211 aaKnown RBP19.81■□□□□ 0.76
VRK3-225ENST00000601912 ABCD1P33897 745 aa19.81■□□□□ 0.76
VRK3-225ENST00000601912 NPTX2P47972 431 aa19.81■□□□□ 0.76
VRK3-225ENST00000601912 SOX10P56693 466 aa19.81■□□□□ 0.76
VRK3-225ENST00000601912 ARHGEF6Q15052 776 aa19.81■□□□□ 0.76
VRK3-225ENST00000601912 PPP2R5AQ15172 486 aa19.81■□□□□ 0.76
VRK3-225ENST00000601912 ZNF484Q5JVG2 852 aa19.81■□□□□ 0.76
VRK3-225ENST00000601912 HS2ST1Q7LGA3 356 aa19.81■□□□□ 0.76
VRK3-225ENST00000601912 SYCP3Q8IZU3 236 aa19.81■□□□□ 0.76
VRK3-225ENST00000601912 GOLGA5Q8TBA6 731 aa19.81■□□□□ 0.76
VRK3-225ENST00000601912 TCP11Q8WWU5 503 aa19.81■□□□□ 0.76
VRK3-225ENST00000601912 ACCSQ96QU6 501 aa19.81■□□□□ 0.76
VRK3-225ENST00000601912 C16orf70Q9BSU1 422 aa19.81■□□□□ 0.76
VRK3-225ENST00000601912 TUT1Q9H6E5 874 aaKnown RBP19.81■□□□□ 0.76
VRK3-225ENST00000601912 SAGE1Q9NXZ1 904 aa19.81■□□□□ 0.76
VRK3-225ENST00000601912 A0A1B0GTH6 734 aa19.8■□□□□ 0.76
VRK3-225ENST00000601912 CETN3O15182 167 aa19.8■□□□□ 0.76
VRK3-225ENST00000601912 GNA14O95837 355 aa19.8■□□□□ 0.76
VRK3-225ENST00000601912 ZNF286BP0CG31 522 aa19.8■□□□□ 0.76
VRK3-225ENST00000601912 CPT1AP50416 773 aa19.8■□□□□ 0.76
VRK3-225ENST00000601912 GTF2BQ00403 316 aa19.8■□□□□ 0.76
VRK3-225ENST00000601912 KCNA1Q09470 495 aa19.8■□□□□ 0.76
VRK3-225ENST00000601912 ADAM9Q13443 819 aa19.8■□□□□ 0.76
VRK3-225ENST00000601912 LRRC55Q6ZSA7 311 aa19.8■□□□□ 0.76
VRK3-225ENST00000601912 CD99L2Q8TCZ2 262 aa19.8■□□□□ 0.76
VRK3-225ENST00000601912 TMEM143Q96AN5 459 aa19.8■□□□□ 0.76
VRK3-225ENST00000601912 HVCN1Q96D96 273 aa19.8■□□□□ 0.76
VRK3-225ENST00000601912 EEF2KMTQ96G04 330 aa19.8■□□□□ 0.76
VRK3-225ENST00000601912 CNOT6LQ96LI5 555 aaKnown RBP19.8■□□□□ 0.76
VRK3-225ENST00000601912 GBP3Q9H0R5 595 aa19.8■□□□□ 0.76
VRK3-225ENST00000601912 RNPEPQ9H4A4 650 aa19.8■□□□□ 0.76
VRK3-225ENST00000601912 SRRDQ9UH36 339 aa19.8■□□□□ 0.76
VRK3-225ENST00000601912 ZSWIM8A7E2V4 1837 aa19.79■□□□□ 0.76
VRK3-225ENST00000601912 N4BP3O15049 544 aa19.79■□□□□ 0.76
VRK3-225ENST00000601912 SCP2P22307 547 aa19.79■□□□□ 0.76
VRK3-225ENST00000601912 ARL2P36404 184 aa19.79■□□□□ 0.76
VRK3-225ENST00000601912 APTXQ7Z2E3 356 aaKnown RBP19.79■□□□□ 0.76
VRK3-225ENST00000601912 FILIP1Q7Z7B0 1213 aa19.79■□□□□ 0.76
VRK3-225ENST00000601912 ERO1AQ96HE7 468 aa19.79■□□□□ 0.76
VRK3-225ENST00000601912 EXOC7Q9UPT5 735 aa19.79■□□□□ 0.76
VRK3-225ENST00000601912 ZBTB42B2RXF5 422 aa19.78■□□□□ 0.76
VRK3-225ENST00000601912 CYBAP13498 195 aa19.78■□□□□ 0.76
VRK3-225ENST00000601912 NR2F2P24468 414 aa19.78■□□□□ 0.76
VRK3-225ENST00000601912 MTIF2P46199 727 aaKnown RBP19.78■□□□□ 0.76
VRK3-225ENST00000601912 COPB1P53618 953 aaKnown RBP19.78■□□□□ 0.76
VRK3-225ENST00000601912 NR1I3Q14994 352 aa19.78■□□□□ 0.76
VRK3-225ENST00000601912 IER5Q5VY09 327 aa19.78■□□□□ 0.76
VRK3-225ENST00000601912 KSR1Q8IVT5 923 aa19.78■□□□□ 0.76
VRK3-225ENST00000601912 TMEM161BQ8NDZ6 487 aa19.78■□□□□ 0.76
VRK3-225ENST00000601912 BSNDQ8WZ55 320 aa19.78■□□□□ 0.76
VRK3-225ENST00000601912 TAB2Q9NYJ8 693 aa19.78■□□□□ 0.76
VRK3-225ENST00000601912 CASP8AP2Q9UKL3 1982 aa19.78■□□□□ 0.76
VRK3-225ENST00000601912 COL1A2P08123 1366 aa19.78■□□□□ 0.76
VRK3-225ENST00000601912 FKTNO75072 461 aa19.78■□□□□ 0.76
VRK3-225ENST00000601912 DUSP11O75319 330 aaKnown RBP19.78■□□□□ 0.76
VRK3-225ENST00000601912 INSRRP14616 1297 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms