RNA–Protein interactions for RNA: ENST00000600778.3

SOX2-OT-233, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 762 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-233ENST00000600778 FAM205CA6NFA0 338 aa13□□□□□ -0.33
SOX2-OT-233ENST00000600778 TBKBP1A7MCY6 615 aa13□□□□□ -0.33
SOX2-OT-233ENST00000600778 JAK2O60674 1132 aa13□□□□□ -0.33
SOX2-OT-233ENST00000600778 ZSCAN20P17040 1043 aaPredicted RBP13□□□□□ -0.33
SOX2-OT-233ENST00000600778 FGFR4P22455 802 aa13□□□□□ -0.33
SOX2-OT-233ENST00000600778 PSMC5P62195 406 aa13□□□□□ -0.33
SOX2-OT-233ENST00000600778 FAM189BP81408 668 aa13□□□□□ -0.33
SOX2-OT-233ENST00000600778 PPP2R5CQ13362 524 aa13□□□□□ -0.33
SOX2-OT-233ENST00000600778 DSC3Q14574 896 aa13□□□□□ -0.33
SOX2-OT-233ENST00000600778 LEXMQ3ZCV2 418 aa13□□□□□ -0.33
SOX2-OT-233ENST00000600778 ZNF710Q8N1W2 664 aa13□□□□□ -0.33
SOX2-OT-233ENST00000600778 KLHL23Q8NBE8 558 aa13□□□□□ -0.33
SOX2-OT-233ENST00000600778 GADD45GIP1Q8TAE8 222 aaPredicted RBP13□□□□□ -0.33
SOX2-OT-233ENST00000600778 P2RX5Q93086 422 aa13□□□□□ -0.33
SOX2-OT-233ENST00000600778 CEP89Q96ST8 783 aa13□□□□□ -0.33
SOX2-OT-233ENST00000600778 ATP6V0A4Q9HBG4 840 aa13□□□□□ -0.33
SOX2-OT-233ENST00000600778 BRMS1Q9HCU9 246 aa13□□□□□ -0.33
SOX2-OT-233ENST00000600778 VAV3Q9UKW4 847 aa13□□□□□ -0.33
SOX2-OT-233ENST00000600778 H3BQ06 376 aaPredicted RBP12.99□□□□□ -0.33
SOX2-OT-233ENST00000600778 TBX3O15119 743 aa12.99□□□□□ -0.33
SOX2-OT-233ENST00000600778 CSDE1O75534 798 aaKnown RBP12.99□□□□□ -0.33
SOX2-OT-233ENST00000600778 BAG4O95429 457 aaKnown RBP12.99□□□□□ -0.33
SOX2-OT-233ENST00000600778 MMP1P03956 469 aa12.99□□□□□ -0.33
SOX2-OT-233ENST00000600778 ITGB1P05556 798 aa12.99□□□□□ -0.33
SOX2-OT-233ENST00000600778 P4HBP07237 508 aaKnown RBP12.99□□□□□ -0.33
SOX2-OT-233ENST00000600778 FGFR1P11362 822 aa12.99□□□□□ -0.33
SOX2-OT-233ENST00000600778 DARSP14868 501 aaKnown RBP12.99□□□□□ -0.33
SOX2-OT-233ENST00000600778 DNAJB1P25685 340 aa12.99□□□□□ -0.33
SOX2-OT-233ENST00000600778 QARSP47897 775 aaKnown RBP12.99□□□□□ -0.33
SOX2-OT-233ENST00000600778 DNM2P50570 870 aa12.99□□□□□ -0.33
SOX2-OT-233ENST00000600778 RABEP1Q15276 862 aa12.99□□□□□ -0.33
SOX2-OT-233ENST00000600778 NAALADL2Q58DX5 795 aa12.99□□□□□ -0.33
SOX2-OT-233ENST00000600778 PLA2G4FQ68DD2 849 aa12.99□□□□□ -0.33
SOX2-OT-233ENST00000600778 NCAPH2Q6IBW4 605 aa12.99□□□□□ -0.33
SOX2-OT-233ENST00000600778 ANO5Q75V66 913 aa12.99□□□□□ -0.33
SOX2-OT-233ENST00000600778 SPPL3Q8TCT6 385 aa12.99□□□□□ -0.33
SOX2-OT-233ENST00000600778 POF1BQ8WVV4 589 aa12.99□□□□□ -0.33
SOX2-OT-233ENST00000600778 HAS1Q92839 578 aa12.99□□□□□ -0.33
SOX2-OT-233ENST00000600778 PABPC5Q96DU9 382 aaKnown RBP12.99□□□□□ -0.33
SOX2-OT-233ENST00000600778 IGFLR1Q9H665 355 aa12.99□□□□□ -0.33
SOX2-OT-233ENST00000600778 ELAC1Q9H777 363 aaKnown RBP12.99□□□□□ -0.33
SOX2-OT-233ENST00000600778 TMEM161AQ9NX61 479 aa12.99□□□□□ -0.33
SOX2-OT-233ENST00000600778 CLDND1Q9NY35 253 aa12.99□□□□□ -0.33
SOX2-OT-233ENST00000600778 SUCLA2Q9P2R7 463 aaPredicted RBP12.99□□□□□ -0.33
SOX2-OT-233ENST00000600778 KIAA1671Q9BY89 1806 aa12.98□□□□□ -0.33
SOX2-OT-233ENST00000600778 A0A087WZ62 844 aa12.98□□□□□ -0.33
SOX2-OT-233ENST00000600778 IGKV6-21A0A0C4DH24 114 aa12.98□□□□□ -0.33
SOX2-OT-233ENST00000600778 BTBD18B2RXH4 712 aa12.98□□□□□ -0.33
SOX2-OT-233ENST00000600778 DKC1O60832 514 aaKnown RBP eCLIP12.98□□□□□ -0.33
SOX2-OT-233ENST00000600778 MAFO75444 373 aaPredicted RBP12.98□□□□□ -0.33
SOX2-OT-233ENST00000600778 NPEPPSP55786 919 aa12.98□□□□□ -0.33
SOX2-OT-233ENST00000600778 CDC42EP1Q00587 391 aa12.98□□□□□ -0.33
SOX2-OT-233ENST00000600778 HYAL1Q12794 435 aa12.98□□□□□ -0.33
SOX2-OT-233ENST00000600778 CAMK1Q14012 370 aa12.98□□□□□ -0.33
SOX2-OT-233ENST00000600778 TRIM29Q14134 588 aa12.98□□□□□ -0.33
SOX2-OT-233ENST00000600778 EPHA7Q15375 998 aa12.98□□□□□ -0.33
SOX2-OT-233ENST00000600778 PTCRAQ6ISU1 281 aaPredicted RBP12.98□□□□□ -0.33
SOX2-OT-233ENST00000600778 RHPN2Q8IUC4 686 aa12.98□□□□□ -0.33
SOX2-OT-233ENST00000600778 SLFN12Q8IYM2 578 aa12.98□□□□□ -0.33
SOX2-OT-233ENST00000600778 ZNF579Q8NAF0 562 aaKnown RBP12.98□□□□□ -0.33
SOX2-OT-233ENST00000600778 NEK9Q8TD19 979 aa12.98□□□□□ -0.33
SOX2-OT-233ENST00000600778 TNFRSF25Q93038 417 aa12.98□□□□□ -0.33
SOX2-OT-233ENST00000600778 DYDC2Q96IM9 177 aa12.98□□□□□ -0.33
SOX2-OT-233ENST00000600778 TBC1D32Q96NH3 1257 aa12.98□□□□□ -0.33
SOX2-OT-233ENST00000600778 FDXACB1Q9BRP7 624 aaPredicted RBP12.98□□□□□ -0.33
SOX2-OT-233ENST00000600778 GCOM2Q9BZD3 368 aaPredicted RBP12.98□□□□□ -0.33
SOX2-OT-233ENST00000600778 CYP26B1Q9NR63 512 aa12.98□□□□□ -0.33
SOX2-OT-233ENST00000600778 TYW1Q9NV66 732 aaKnown RBP12.98□□□□□ -0.33
SOX2-OT-233ENST00000600778 WRAP73Q9P2S5 460 aaPredicted RBP12.98□□□□□ -0.33
SOX2-OT-233ENST00000600778 HCSTQ9UBK5 93 aa12.98□□□□□ -0.33
SOX2-OT-233ENST00000600778 LIMCH1Q9UPQ0 1083 aa12.98□□□□□ -0.33
SOX2-OT-233ENST00000600778 PCDHB12Q9Y5F1 795 aa12.98□□□□□ -0.33
SOX2-OT-233ENST00000600778 IL9P15248 144 aa12.97□□□□□ -0.33
SOX2-OT-233ENST00000600778 GTF2F1P35269 517 aaKnown RBP eCLIP12.97□□□□□ -0.33
SOX2-OT-233ENST00000600778 IRS1P35568 1242 aa12.97□□□□□ -0.33
SOX2-OT-233ENST00000600778 ST3GAL1Q11201 340 aa12.97□□□□□ -0.33
SOX2-OT-233ENST00000600778 ECHDC2Q86YB7 292 aa12.97□□□□□ -0.33
SOX2-OT-233ENST00000600778 KSR1Q8IVT5 923 aa12.97□□□□□ -0.33
SOX2-OT-233ENST00000600778 DIS3L2Q8IYB7 885 aaKnown RBP12.97□□□□□ -0.33
SOX2-OT-233ENST00000600778 RNF169Q8NCN4 708 aa12.97□□□□□ -0.33
SOX2-OT-233ENST00000600778 CEP170P1Q96L14 293 aa12.97□□□□□ -0.33
SOX2-OT-233ENST00000600778 JPH2Q9BR39 696 aaPredicted RBP12.97□□□□□ -0.33
SOX2-OT-233ENST00000600778 CWH43Q9H720 699 aa12.97□□□□□ -0.33
SOX2-OT-233ENST00000600778 AAASQ9NRG9 546 aa12.97□□□□□ -0.33
SOX2-OT-233ENST00000600778 RGL1Q9NZL6 768 aa12.97□□□□□ -0.33
SOX2-OT-233ENST00000600778 FNDC1Q4ZHG4 1894 aaPredicted RBP12.97□□□□□ -0.33
SOX2-OT-233ENST00000600778 ATG2AQ2TAZ0 1938 aa12.96□□□□□ -0.33
SOX2-OT-233ENST00000600778 TTC28Q96AY4 2481 aa12.96□□□□□ -0.33
SOX2-OT-233ENST00000600778 GRXCR2A6NFK2 248 aa12.96□□□□□ -0.33
SOX2-OT-233ENST00000600778 NCK2O43639 380 aa12.96□□□□□ -0.33
SOX2-OT-233ENST00000600778 LTBRP36941 435 aa12.96□□□□□ -0.33
SOX2-OT-233ENST00000600778 GUCY1B3Q02153 619 aa12.96□□□□□ -0.33
SOX2-OT-233ENST00000600778 CYP4A11Q02928 519 aa12.96□□□□□ -0.33
SOX2-OT-233ENST00000600778 CTTNQ14247 550 aaKnown RBP12.96□□□□□ -0.33
SOX2-OT-233ENST00000600778 COL19A1Q14993 1142 aa12.96□□□□□ -0.33
SOX2-OT-233ENST00000600778 ADGRD2Q7Z7M1 963 aa12.96□□□□□ -0.33
SOX2-OT-233ENST00000600778 CCDC83Q8IWF9 413 aa12.96□□□□□ -0.33
SOX2-OT-233ENST00000600778 C4orf19Q8IY42 314 aa12.96□□□□□ -0.33
SOX2-OT-233ENST00000600778 ABI1Q8IZP0 508 aa12.96□□□□□ -0.33
SOX2-OT-233ENST00000600778 COLGALT1Q8NBJ5 622 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms