RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 RAB21Q9UL25 225 aa12.57□□□□□ -0.4
ARHGEF1-220ENST00000600274 ZHX2Q9Y6X8 837 aa12.57□□□□□ -0.4
ARHGEF1-220ENST00000600274 SSU72P8A0A1W2PR75 194 aa12.56□□□□□ -0.4
ARHGEF1-220ENST00000600274 BACH1O14867 736 aa12.56□□□□□ -0.4
ARHGEF1-220ENST00000600274 EVI5O60447 810 aa12.56□□□□□ -0.4
ARHGEF1-220ENST00000600274 ECM2O94769 699 aaPredicted RBP12.56□□□□□ -0.4
ARHGEF1-220ENST00000600274 GAP43P17677 238 aa12.56□□□□□ -0.4
ARHGEF1-220ENST00000600274 HNRNPH3P31942 346 aaKnown RBP12.56□□□□□ -0.4
ARHGEF1-220ENST00000600274 GMPSP49915 693 aaPredicted RBP12.56□□□□□ -0.4
ARHGEF1-220ENST00000600274 MYL7Q01449 175 aa12.56□□□□□ -0.4
ARHGEF1-220ENST00000600274 BAATQ14032 418 aaPredicted RBP12.56□□□□□ -0.4
ARHGEF1-220ENST00000600274 STXBP4Q6ZWJ1 553 aa12.56□□□□□ -0.4
ARHGEF1-220ENST00000600274 NUCKS1Q9H1E3 243 aaKnown RBP12.56□□□□□ -0.4
ARHGEF1-220ENST00000600274 DEFB129Q9H1M3 183 aa12.56□□□□□ -0.4
ARHGEF1-220ENST00000600274 FAM204AQ9H8W3 233 aa12.56□□□□□ -0.4
ARHGEF1-220ENST00000600274 METTL14Q9HCE5 456 aaKnown RBP12.56□□□□□ -0.4
ARHGEF1-220ENST00000600274 NFU1Q9UMS0 254 aa12.56□□□□□ -0.4
ARHGEF1-220ENST00000600274 TRAF3IP3Q9Y228 551 aa12.56□□□□□ -0.4
ARHGEF1-220ENST00000600274 MYO1CO00159 1063 aa12.56□□□□□ -0.4
ARHGEF1-220ENST00000600274 DLATP10515 647 aaKnown RBP12.56□□□□□ -0.4
ARHGEF1-220ENST00000600274 HARSP12081 509 aaKnown RBP12.56□□□□□ -0.4
ARHGEF1-220ENST00000600274 GGCXP38435 758 aa12.56□□□□□ -0.4
ARHGEF1-220ENST00000600274 MKRN4PQ13434 485 aaPredicted RBP12.56□□□□□ -0.4
ARHGEF1-220ENST00000600274 TRADDQ15628 312 aa12.56□□□□□ -0.4
ARHGEF1-220ENST00000600274 KCTD16Q68DU8 428 aa12.56□□□□□ -0.4
ARHGEF1-220ENST00000600274 ZNF720Q7Z2F6 126 aa12.56□□□□□ -0.4
ARHGEF1-220ENST00000600274 PEX26Q7Z412 305 aa12.56□□□□□ -0.4
ARHGEF1-220ENST00000600274 SLC5A5Q92911 643 aa12.56□□□□□ -0.4
ARHGEF1-220ENST00000600274 BICD1Q96G01 975 aa12.56□□□□□ -0.4
ARHGEF1-220ENST00000600274 GMLQ99445 158 aa12.56□□□□□ -0.4
ARHGEF1-220ENST00000600274 UBE2TQ9NPD8 197 aaPredicted RBP12.56□□□□□ -0.4
ARHGEF1-220ENST00000600274 LARSQ9P2J5 1176 aaKnown RBP12.56□□□□□ -0.4
ARHGEF1-220ENST00000600274 RNF40O75150 1001 aa12.56□□□□□ -0.4
ARHGEF1-220ENST00000600274 HEXIM1O94992 359 aaKnown RBP12.56□□□□□ -0.4
ARHGEF1-220ENST00000600274 ITGB3BPQ13352 177 aaPredicted RBP12.56□□□□□ -0.4
ARHGEF1-220ENST00000600274 EPHA7Q15375 998 aa12.56□□□□□ -0.4
ARHGEF1-220ENST00000600274 UGCGQ16739 394 aa12.56□□□□□ -0.4
ARHGEF1-220ENST00000600274 RNF207Q6ZRF8 634 aa12.56□□□□□ -0.4
ARHGEF1-220ENST00000600274 TUFT1Q9NNX1 390 aa12.56□□□□□ -0.4
ARHGEF1-220ENST00000600274 OSGEPQ9NPF4 335 aa12.56□□□□□ -0.4
ARHGEF1-220ENST00000600274 HACL1Q9UJ83 578 aa12.56□□□□□ -0.4
ARHGEF1-220ENST00000600274 FRMD3A2A2Y4 597 aa12.55□□□□□ -0.4
ARHGEF1-220ENST00000600274 H2AFZP0C0S5 128 aa12.55□□□□□ -0.4
ARHGEF1-220ENST00000600274 VCAM1P19320 739 aa12.55□□□□□ -0.4
ARHGEF1-220ENST00000600274 COPB2P35606 906 aa12.55□□□□□ -0.4
ARHGEF1-220ENST00000600274 FMO5P49326 533 aa12.55□□□□□ -0.4
ARHGEF1-220ENST00000600274 TKFCQ3LXA3 575 aa12.55□□□□□ -0.4
ARHGEF1-220ENST00000600274 LMBRD2Q68DH5 695 aaPredicted RBP12.55□□□□□ -0.4
ARHGEF1-220ENST00000600274 H2AFVQ71UI9 128 aa12.55□□□□□ -0.4
ARHGEF1-220ENST00000600274 PPM1KQ8N3J5 372 aa12.55□□□□□ -0.4
ARHGEF1-220ENST00000600274 POP1Q99575 1024 aaKnown RBP12.55□□□□□ -0.4
ARHGEF1-220ENST00000600274 NAGPAQ9UK23 515 aa12.55□□□□□ -0.4
ARHGEF1-220ENST00000600274 RIPK3Q9Y572 518 aa12.55□□□□□ -0.4
ARHGEF1-220ENST00000600274 EMSYQ7Z589 1322 aa12.55□□□□□ -0.4
ARHGEF1-220ENST00000600274 PIK3CDO00329 1044 aa12.55□□□□□ -0.4
ARHGEF1-220ENST00000600274 ZBED4O75132 1171 aa12.55□□□□□ -0.4
ARHGEF1-220ENST00000600274 CALCAP01258 141 aa12.55□□□□□ -0.4
ARHGEF1-220ENST00000600274 ICAM1P05362 532 aa12.55□□□□□ -0.4
ARHGEF1-220ENST00000600274 CYP3A4P08684 503 aa12.55□□□□□ -0.4
ARHGEF1-220ENST00000600274 TNFAIP3P21580 790 aa12.55□□□□□ -0.4
ARHGEF1-220ENST00000600274 MAP2K1Q02750 393 aaPredicted RBP12.55□□□□□ -0.4
ARHGEF1-220ENST00000600274 ASTE1Q2TB18 679 aaPredicted RBP12.55□□□□□ -0.4
ARHGEF1-220ENST00000600274 FOXR1Q6PIV2 292 aa12.55□□□□□ -0.4
ARHGEF1-220ENST00000600274 EEPD1Q7L9B9 569 aa12.55□□□□□ -0.4
ARHGEF1-220ENST00000600274 FAM107BQ9H098 131 aa12.55□□□□□ -0.4
ARHGEF1-220ENST00000600274 RNF146Q9NTX7 359 aa12.55□□□□□ -0.4
ARHGEF1-220ENST00000600274 FAM53CQ9NYF3 392 aa12.55□□□□□ -0.4
ARHGEF1-220ENST00000600274 CNOT7Q9UIV1 285 aaKnown RBP12.55□□□□□ -0.4
ARHGEF1-220ENST00000600274 GRID2IPA4D2P6 1211 aa12.55□□□□□ -0.4
ARHGEF1-220ENST00000600274 GOLGA6BA6NDN3 693 aa12.55□□□□□ -0.4
ARHGEF1-220ENST00000600274 NPM3O75607 178 aaKnown RBP12.55□□□□□ -0.4
ARHGEF1-220ENST00000600274 KCNA3P22001 575 aa12.55□□□□□ -0.4
ARHGEF1-220ENST00000600274 YWHABP31946 246 aaKnown RBP12.55□□□□□ -0.4
ARHGEF1-220ENST00000600274 ZNF211Q13398 564 aaPredicted RBP12.55□□□□□ -0.4
ARHGEF1-220ENST00000600274 SNRNP48Q6IEG0 339 aaKnown RBP12.55□□□□□ -0.4
ARHGEF1-220ENST00000600274 IRF2BP2Q7Z5L9 587 aa12.55□□□□□ -0.4
ARHGEF1-220ENST00000600274 SYTL5Q8TDW5 730 aaPredicted RBP12.55□□□□□ -0.4
ARHGEF1-220ENST00000600274 KAT5Q92993 513 aa12.55□□□□□ -0.4
ARHGEF1-220ENST00000600274 PICK1Q9NRD5 415 aa12.55□□□□□ -0.4
ARHGEF1-220ENST00000600274 TELO2Q9Y4R8 837 aa12.55□□□□□ -0.4
ARHGEF1-220ENST00000600274 ATP8B1O43520 1251 aa12.54□□□□□ -0.4
ARHGEF1-220ENST00000600274 CARSP49589 748 aaKnown RBP12.54□□□□□ -0.4
ARHGEF1-220ENST00000600274 MRPS9P82933 396 aaKnown RBP12.54□□□□□ -0.4
ARHGEF1-220ENST00000600274 NAB2Q15742 525 aa12.54□□□□□ -0.4
ARHGEF1-220ENST00000600274 WDR78Q5VTH9 848 aa12.54□□□□□ -0.4
ARHGEF1-220ENST00000600274 CCNI2Q6ZMN8 369 aaPredicted RBP12.54□□□□□ -0.4
ARHGEF1-220ENST00000600274 EP400NLQ6ZTU2 488 aa12.54□□□□□ -0.4
ARHGEF1-220ENST00000600274 EPM2AIP1Q7L775 607 aaPredicted RBP12.54□□□□□ -0.4
ARHGEF1-220ENST00000600274 INTS2Q9H0H0 1204 aaKnown RBP12.54□□□□□ -0.4
ARHGEF1-220ENST00000600274 FEZ2Q9UHY8 353 aaPredicted RBP12.54□□□□□ -0.4
ARHGEF1-220ENST00000600274 RRP15Q9Y3B9 282 aaKnown RBP12.54□□□□□ -0.4
ARHGEF1-220ENST00000600274 MAP2K7O14733 419 aa12.54□□□□□ -0.4
ARHGEF1-220ENST00000600274 ATMINO43313 823 aaPredicted RBP12.54□□□□□ -0.4
ARHGEF1-220ENST00000600274 SSTR3P32745 418 aaPredicted RBP12.54□□□□□ -0.4
ARHGEF1-220ENST00000600274 QARSP47897 775 aaKnown RBP12.54□□□□□ -0.4
ARHGEF1-220ENST00000600274 PPP2R5CQ13362 524 aa12.54□□□□□ -0.4
ARHGEF1-220ENST00000600274 NLRX1Q86UT6 975 aa12.54□□□□□ -0.4
ARHGEF1-220ENST00000600274 DDX42Q86XP3 938 aaKnown RBP eCLIP12.54□□□□□ -0.4
ARHGEF1-220ENST00000600274 DDX47Q9H0S4 455 aaKnown RBP12.54□□□□□ -0.4
ARHGEF1-220ENST00000600274 P4HBP07237 508 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms