RNA–Protein interactions for RNA: ENST00000598570.5

USHBP1-209, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-209ENST00000598570 RGS18Q9NS28 235 aa19.69■□□□□ 0.74
USHBP1-209ENST00000598570 SUCLA2Q9P2R7 463 aaPredicted RBP19.69■□□□□ 0.74
USHBP1-209ENST00000598570 LRWD1Q9UFC0 647 aa19.69■□□□□ 0.74
USHBP1-209ENST00000598570 ST3GAL5Q9UNP4 418 aa19.69■□□□□ 0.74
USHBP1-209ENST00000598570 STX6O43752 255 aa19.68■□□□□ 0.74
USHBP1-209ENST00000598570 MYOGP15173 224 aa19.68■□□□□ 0.74
USHBP1-209ENST00000598570 ARL2P36404 184 aa19.68■□□□□ 0.74
USHBP1-209ENST00000598570 PTPAQ15257 358 aa19.68■□□□□ 0.74
USHBP1-209ENST00000598570 XKR9Q5GH70 373 aa19.68■□□□□ 0.74
USHBP1-209ENST00000598570 ZNF697Q5TEC3 545 aa19.68■□□□□ 0.74
USHBP1-209ENST00000598570 Q7L0L9 218 aa19.68■□□□□ 0.74
USHBP1-209ENST00000598570 HSCBQ8IWL3 235 aa19.68■□□□□ 0.74
USHBP1-209ENST00000598570 TRAIPQ9BWF2 469 aa19.68■□□□□ 0.74
USHBP1-209ENST00000598570 RAB34Q9BZG1 259 aa19.68■□□□□ 0.74
USHBP1-209ENST00000598570 ZSCAN16Q9H4T2 348 aaPredicted RBP19.68■□□□□ 0.74
USHBP1-209ENST00000598570 AKT3Q9Y243 479 aa19.68■□□□□ 0.74
USHBP1-209ENST00000598570 MYO9BQ13459 2157 aa19.67■□□□□ 0.74
USHBP1-209ENST00000598570 RPS6KA5O75582 802 aa19.67■□□□□ 0.74
USHBP1-209ENST00000598570 PAK2Q13177 524 aa19.67■□□□□ 0.74
USHBP1-209ENST00000598570 EMC2Q15006 297 aa19.67■□□□□ 0.74
USHBP1-209ENST00000598570 HAUS3Q68CZ6 603 aa19.67■□□□□ 0.74
USHBP1-209ENST00000598570 PIGOQ8TEQ8 1089 aa19.67■□□□□ 0.74
USHBP1-209ENST00000598570 TCP11Q8WWU5 503 aa19.67■□□□□ 0.74
USHBP1-209ENST00000598570 PRPF31Q8WWY3 499 aaKnown RBP19.67■□□□□ 0.74
USHBP1-209ENST00000598570 ZNF689Q96CS4 500 aaPredicted RBP19.67■□□□□ 0.74
USHBP1-209ENST00000598570 OSMRQ99650 979 aa19.67■□□□□ 0.74
USHBP1-209ENST00000598570 INSL6Q9Y581 213 aa19.67■□□□□ 0.74
USHBP1-209ENST00000598570 CDH23Q9H251 3354 aa19.66■□□□□ 0.74
USHBP1-209ENST00000598570 C9IYK1 514 aa19.66■□□□□ 0.74
USHBP1-209ENST00000598570 MGEA5O60502 916 aa19.66■□□□□ 0.74
USHBP1-209ENST00000598570 ARHGEF15O94989 841 aa19.66■□□□□ 0.74
USHBP1-209ENST00000598570 POU3F3P20264 500 aaPredicted RBP19.66■□□□□ 0.74
USHBP1-209ENST00000598570 TAP1Q03518 808 aa19.66■□□□□ 0.74
USHBP1-209ENST00000598570 FERMT3Q86UX7 667 aa19.66■□□□□ 0.74
USHBP1-209ENST00000598570 AK8Q96MA6 479 aa19.66■□□□□ 0.74
USHBP1-209ENST00000598570 NFKBIZQ9BYH8 718 aa19.66■□□□□ 0.74
USHBP1-209ENST00000598570 NKX2-4Q9H2Z4 354 aa19.66■□□□□ 0.74
USHBP1-209ENST00000598570 VPS37CA5D8V6 355 aaPredicted RBP19.65■□□□□ 0.74
USHBP1-209ENST00000598570 TLL1O43897 1013 aa19.65■□□□□ 0.74
USHBP1-209ENST00000598570 CA3P07451 260 aa19.65■□□□□ 0.74
USHBP1-209ENST00000598570 LINC00271P0C7V0 271 aa19.65■□□□□ 0.74
USHBP1-209ENST00000598570 POLGP54098 1239 aaPredicted RBP19.65■□□□□ 0.74
USHBP1-209ENST00000598570 LAMTOR4Q0VGL1 99 aa19.65■□□□□ 0.74
USHBP1-209ENST00000598570 MXD4Q14582 209 aaPredicted RBP19.65■□□□□ 0.74
USHBP1-209ENST00000598570 GRIN2CQ14957 1233 aa19.65■□□□□ 0.74
USHBP1-209ENST00000598570 POTEGQ6S5H5 508 aa19.65■□□□□ 0.74
USHBP1-209ENST00000598570 TMCO2Q7Z6W1 182 aaPredicted RBP19.65■□□□□ 0.74
USHBP1-209ENST00000598570 PSPC1Q8WXF1 523 aaKnown RBP19.65■□□□□ 0.74
USHBP1-209ENST00000598570 GCOM2Q9BZD3 368 aaPredicted RBP19.65■□□□□ 0.74
USHBP1-209ENST00000598570 SLC28A3Q9HAS3 691 aa19.65■□□□□ 0.74
USHBP1-209ENST00000598570 CHST12Q9NRB3 414 aa19.65■□□□□ 0.74
USHBP1-209ENST00000598570 C1orf112Q9NSG2 853 aa19.65■□□□□ 0.74
USHBP1-209ENST00000598570 STXBP5LQ9Y2K9 1186 aa19.65■□□□□ 0.74
USHBP1-209ENST00000598570 COL4A3BPQ9Y5P4 624 aa19.65■□□□□ 0.74
USHBP1-209ENST00000598570 COL6A3P12111 3177 aa19.65■□□□□ 0.74
USHBP1-209ENST00000598570 A0A087WZ62 844 aa19.64■□□□□ 0.73
USHBP1-209ENST00000598570 DGKIO75912 1065 aa19.64■□□□□ 0.73
USHBP1-209ENST00000598570 CYP11B2P19099 503 aa19.64■□□□□ 0.73
USHBP1-209ENST00000598570 PCBP1Q15365 356 aaKnown RBP eCLIP19.64■□□□□ 0.73
USHBP1-209ENST00000598570 SF3A1Q15459 793 aaKnown RBP19.64■□□□□ 0.73
USHBP1-209ENST00000598570 SLC24A5Q71RS6 500 aa19.64■□□□□ 0.73
USHBP1-209ENST00000598570 SRGAP1Q7Z6B7 1085 aa19.64■□□□□ 0.73
USHBP1-209ENST00000598570 TMEM143Q96AN5 459 aa19.64■□□□□ 0.73
USHBP1-209ENST00000598570 CDX2Q99626 313 aaPredicted RBP19.64■□□□□ 0.73
USHBP1-209ENST00000598570 MTRQ99707 1265 aa19.64■□□□□ 0.73
USHBP1-209ENST00000598570 FDXACB1Q9BRP7 624 aaPredicted RBP19.64■□□□□ 0.73
USHBP1-209ENST00000598570 INO80BQ9C086 356 aaPredicted RBP19.64■□□□□ 0.73
USHBP1-209ENST00000598570 ELAC1Q9H777 363 aaKnown RBP19.64■□□□□ 0.73
USHBP1-209ENST00000598570 ATP6V0A4Q9HBG4 840 aa19.64■□□□□ 0.73
USHBP1-209ENST00000598570 A0A087WWV3 80 aa19.63■□□□□ 0.73
USHBP1-209ENST00000598570 LCHNA4D1U4 455 aa19.63■□□□□ 0.73
USHBP1-209ENST00000598570 PP2D1A8MPX8 630 aa19.63■□□□□ 0.73
USHBP1-209ENST00000598570 CCT6AP40227 531 aaKnown RBP19.63■□□□□ 0.73
USHBP1-209ENST00000598570 SARSP49591 514 aaKnown RBP19.63■□□□□ 0.73
USHBP1-209ENST00000598570 PTENP60484 403 aa19.63■□□□□ 0.73
USHBP1-209ENST00000598570 ERVK-21P61565 698 aa19.63■□□□□ 0.73
USHBP1-209ENST00000598570 KRT79Q5XKE5 535 aa19.63■□□□□ 0.73
USHBP1-209ENST00000598570 RHPN2Q8IUC4 686 aa19.63■□□□□ 0.73
USHBP1-209ENST00000598570 NPAS4Q8IUM7 802 aa19.63■□□□□ 0.73
USHBP1-209ENST00000598570 KSR1Q8IVT5 923 aa19.63■□□□□ 0.73
USHBP1-209ENST00000598570 PNMA5Q96PV4 448 aa19.63■□□□□ 0.73
USHBP1-209ENST00000598570 KIAA1024Q9UPX6 916 aa19.63■□□□□ 0.73
USHBP1-209ENST00000598570 CLIC4Q9Y696 253 aa19.63■□□□□ 0.73
USHBP1-209ENST00000598570 LINC01553A4QN01 128 aa19.62■□□□□ 0.73
USHBP1-209ENST00000598570 EYA4O95677 639 aa19.62■□□□□ 0.73
USHBP1-209ENST00000598570 CDC25AP30304 524 aa19.62■□□□□ 0.73
USHBP1-209ENST00000598570 LONP1P36776 959 aaKnown RBP19.62■□□□□ 0.73
USHBP1-209ENST00000598570 NASPP49321 788 aaPredicted RBP19.62■□□□□ 0.73
USHBP1-209ENST00000598570 NFX1Q12986 1120 aaKnown RBP19.62■□□□□ 0.73
USHBP1-209ENST00000598570 SLC39A14Q15043 492 aa19.62■□□□□ 0.73
USHBP1-209ENST00000598570 TMEM119Q4V9L6 283 aa19.62■□□□□ 0.73
USHBP1-209ENST00000598570 PADI6Q6TGC4 694 aa19.62■□□□□ 0.73
USHBP1-209ENST00000598570 MYOCDQ8IZQ8 938 aa19.62■□□□□ 0.73
USHBP1-209ENST00000598570 MCPH1Q8NEM0 835 aa19.62■□□□□ 0.73
USHBP1-209ENST00000598570 NLRP7Q8WX94 980 aa19.62■□□□□ 0.73
USHBP1-209ENST00000598570 ADAM2Q99965 735 aa19.62■□□□□ 0.73
USHBP1-209ENST00000598570 FOXD4L1Q9NU39 408 aa19.62■□□□□ 0.73
USHBP1-209ENST00000598570 RNF216Q9NWF9 866 aaPredicted RBP19.62■□□□□ 0.73
USHBP1-209ENST00000598570 GINS2Q9Y248 185 aa19.62■□□□□ 0.73
USHBP1-209ENST00000598570 VWA3AA6NCI4 1184 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms