RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 PSAPP07602 524 aa13.46□□□□□ -0.25
SHKBP1-213ENST00000597325 SUPT20HL2P0C7V6 817 aa13.46□□□□□ -0.25
SHKBP1-213ENST00000597325 CDC25AP30304 524 aa13.46□□□□□ -0.25
SHKBP1-213ENST00000597325 NBL1P41271 181 aa13.46□□□□□ -0.25
SHKBP1-213ENST00000597325 NDUFA8P51970 172 aa13.46□□□□□ -0.25
SHKBP1-213ENST00000597325 DEFB103AP81534 67 aa13.46□□□□□ -0.25
SHKBP1-213ENST00000597325 SP2Q02086 613 aa13.46□□□□□ -0.25
SHKBP1-213ENST00000597325 TNFAIP2Q03169 654 aa13.46□□□□□ -0.25
SHKBP1-213ENST00000597325 KARSQ15046 597 aaKnown RBP13.46□□□□□ -0.25
SHKBP1-213ENST00000597325 CELF3Q5SZQ8 465 aaKnown RBP13.46□□□□□ -0.25
SHKBP1-213ENST00000597325 MIS18BP1Q6P0N0 1132 aa13.46□□□□□ -0.25
SHKBP1-213ENST00000597325 CCDC62Q6P9F0 684 aa13.46□□□□□ -0.25
SHKBP1-213ENST00000597325 SYAP1Q96A49 352 aaPredicted RBP13.46□□□□□ -0.25
SHKBP1-213ENST00000597325 CCDC34Q96HJ3 373 aa13.46□□□□□ -0.25
SHKBP1-213ENST00000597325 NT5C3AQ9H0P0 336 aa13.46□□□□□ -0.25
SHKBP1-213ENST00000597325 DISC1Q9NRI5 854 aa13.46□□□□□ -0.25
SHKBP1-213ENST00000597325 HPSEQ9Y251 543 aa13.46□□□□□ -0.25
SHKBP1-213ENST00000597325 ASPMQ8IZT6 3477 aa13.46□□□□□ -0.26
SHKBP1-213ENST00000597325 PKD1L2Q7Z442 2459 aa13.46□□□□□ -0.26
SHKBP1-213ENST00000597325 FAM237AA0A1B0GTK4 181 aa13.45□□□□□ -0.26
SHKBP1-213ENST00000597325 CCNE2O96020 404 aa13.45□□□□□ -0.26
SHKBP1-213ENST00000597325 LIG1P18858 919 aa13.45□□□□□ -0.26
SHKBP1-213ENST00000597325 AVPR2P30518 371 aa13.45□□□□□ -0.26
SHKBP1-213ENST00000597325 STAT6P42226 847 aa13.45□□□□□ -0.26
SHKBP1-213ENST00000597325 KCNJ6P48051 423 aa13.45□□□□□ -0.26
SHKBP1-213ENST00000597325 ACTR2P61160 394 aa13.45□□□□□ -0.26
SHKBP1-213ENST00000597325 ZXDAP98168 799 aa13.45□□□□□ -0.26
SHKBP1-213ENST00000597325 LAMC2Q13753 1193 aa13.45□□□□□ -0.26
SHKBP1-213ENST00000597325 GPNMBQ14956 572 aa13.45□□□□□ -0.26
SHKBP1-213ENST00000597325 EPHA7Q15375 998 aa13.45□□□□□ -0.26
SHKBP1-213ENST00000597325 KLHL40Q2TBA0 621 aa13.45□□□□□ -0.26
SHKBP1-213ENST00000597325 DUSP28Q4G0W2 176 aa13.45□□□□□ -0.26
SHKBP1-213ENST00000597325 TCEAL5Q5H9L2 206 aa13.45□□□□□ -0.26
SHKBP1-213ENST00000597325 RRAGBQ5VZM2 374 aa13.45□□□□□ -0.26
SHKBP1-213ENST00000597325 USP49Q70CQ1 688 aa13.45□□□□□ -0.26
SHKBP1-213ENST00000597325 PDILTQ8N807 584 aa13.45□□□□□ -0.26
SHKBP1-213ENST00000597325 GPT2Q8TD30 523 aa13.45□□□□□ -0.26
SHKBP1-213ENST00000597325 DHX58Q96C10 678 aa13.45□□□□□ -0.26
SHKBP1-213ENST00000597325 SPATA33Q96N06 139 aa13.45□□□□□ -0.26
SHKBP1-213ENST00000597325 CNTNAP3BQ96NU0 1288 aa13.45□□□□□ -0.26
SHKBP1-213ENST00000597325 EIF2AK1Q9BQI3 630 aaKnown RBP13.45□□□□□ -0.26
SHKBP1-213ENST00000597325 POLR3CQ9BUI4 534 aaPredicted RBP13.45□□□□□ -0.26
SHKBP1-213ENST00000597325 CNTNAP3Q9BZ76 1288 aa13.45□□□□□ -0.26
SHKBP1-213ENST00000597325 TUFT1Q9NNX1 390 aa13.45□□□□□ -0.26
SHKBP1-213ENST00000597325 DDX19AQ9NUU7 478 aaKnown RBP13.45□□□□□ -0.26
SHKBP1-213ENST00000597325 USP25Q9UHP3 1055 aa13.45□□□□□ -0.26
SHKBP1-213ENST00000597325 PCDHA10Q9Y5I2 948 aa13.45□□□□□ -0.26
SHKBP1-213ENST00000597325 DOCK5Q9H7D0 1870 aa13.44□□□□□ -0.26
SHKBP1-213ENST00000597325 EML1O00423 815 aa13.44□□□□□ -0.26
SHKBP1-213ENST00000597325 BACH1O14867 736 aa13.44□□□□□ -0.26
SHKBP1-213ENST00000597325 POLR2DO15514 142 aaKnown RBP13.44□□□□□ -0.26
SHKBP1-213ENST00000597325 MBTPS2O43462 519 aa13.44□□□□□ -0.26
SHKBP1-213ENST00000597325 DKC1O60832 514 aaKnown RBP eCLIP13.44□□□□□ -0.26
SHKBP1-213ENST00000597325 P4HBP07237 508 aaKnown RBP13.44□□□□□ -0.26
SHKBP1-213ENST00000597325 SMPD1P17405 629 aa13.44□□□□□ -0.26
SHKBP1-213ENST00000597325 RPA1P27694 616 aa13.44□□□□□ -0.26
SHKBP1-213ENST00000597325 CYP4A11Q02928 519 aa13.44□□□□□ -0.26
SHKBP1-213ENST00000597325 ARHGAP1Q07960 439 aa13.44□□□□□ -0.26
SHKBP1-213ENST00000597325 CTC1Q2NKJ3 1217 aa13.44□□□□□ -0.26
SHKBP1-213ENST00000597325 TIGD5Q53EQ6 642 aa13.44□□□□□ -0.26
SHKBP1-213ENST00000597325 B3GNT9Q6UX72 402 aa13.44□□□□□ -0.26
SHKBP1-213ENST00000597325 CEP57L1Q8IYX8 460 aa13.44□□□□□ -0.26
SHKBP1-213ENST00000597325 FMR1NBQ8N0W7 255 aaPredicted RBP13.44□□□□□ -0.26
SHKBP1-213ENST00000597325 IQUBQ8NA54 791 aa13.44□□□□□ -0.26
SHKBP1-213ENST00000597325 BANK1Q8NDB2 785 aa13.44□□□□□ -0.26
SHKBP1-213ENST00000597325 FBXO22Q8NEZ5 403 aa13.44□□□□□ -0.26
SHKBP1-213ENST00000597325 OR6J1Q8NGC5 347 aa13.44□□□□□ -0.26
SHKBP1-213ENST00000597325 ATP6V0A1Q93050 837 aa13.44□□□□□ -0.26
SHKBP1-213ENST00000597325 ASIC4Q96FT7 647 aa13.44□□□□□ -0.26
SHKBP1-213ENST00000597325 C17orf80Q9BSJ5 609 aa13.44□□□□□ -0.26
SHKBP1-213ENST00000597325 ZBED2Q9BTP6 218 aa13.44□□□□□ -0.26
SHKBP1-213ENST00000597325 MMTAG2Q9BU76 263 aaKnown RBP13.44□□□□□ -0.26
SHKBP1-213ENST00000597325 DACT1Q9NYF0 836 aa13.44□□□□□ -0.26
SHKBP1-213ENST00000597325 STK17AQ9UEE5 414 aa13.44□□□□□ -0.26
SHKBP1-213ENST00000597325 MYO7AQ13402 2215 aa13.44□□□□□ -0.26
SHKBP1-213ENST00000597325 TRAK2O60296 914 aa13.43□□□□□ -0.26
SHKBP1-213ENST00000597325 ZEB2O60315 1214 aa13.43□□□□□ -0.26
SHKBP1-213ENST00000597325 MED24O75448 989 aa13.43□□□□□ -0.26
SHKBP1-213ENST00000597325 NR1I2O75469 434 aa13.43□□□□□ -0.26
SHKBP1-213ENST00000597325 ZNF202O95125 648 aa13.43□□□□□ -0.26
SHKBP1-213ENST00000597325 PLCG1P19174 1290 aa13.43□□□□□ -0.26
SHKBP1-213ENST00000597325 MUTP22033 750 aa13.43□□□□□ -0.26
SHKBP1-213ENST00000597325 FAM160B1Q5W0V3 765 aa13.43□□□□□ -0.26
SHKBP1-213ENST00000597325 TPH2Q8IWU9 490 aa13.43□□□□□ -0.26
SHKBP1-213ENST00000597325 PPTC7Q8NI37 304 aa13.43□□□□□ -0.26
SHKBP1-213ENST00000597325 SEPT1Q8WYJ6 367 aa13.43□□□□□ -0.26
SHKBP1-213ENST00000597325 COPS5Q92905 334 aa13.43□□□□□ -0.26
SHKBP1-213ENST00000597325 EMID1Q96A84 441 aaPredicted RBP13.43□□□□□ -0.26
SHKBP1-213ENST00000597325 DYDC2Q96IM9 177 aa13.43□□□□□ -0.26
SHKBP1-213ENST00000597325 PLIN2Q99541 437 aa13.43□□□□□ -0.26
SHKBP1-213ENST00000597325 LXNQ9BS40 222 aa13.43□□□□□ -0.26
SHKBP1-213ENST00000597325 PANK2Q9BZ23 570 aa13.43□□□□□ -0.26
SHKBP1-213ENST00000597325 AP5M1Q9H0R1 490 aa13.43□□□□□ -0.26
SHKBP1-213ENST00000597325 CUEDC2Q9H467 287 aa13.43□□□□□ -0.26
SHKBP1-213ENST00000597325 AZI2Q9H6S1 392 aa13.43□□□□□ -0.26
SHKBP1-213ENST00000597325 MAGEF1Q9HAY2 307 aa13.43□□□□□ -0.26
SHKBP1-213ENST00000597325 CLDND1Q9NY35 253 aa13.43□□□□□ -0.26
SHKBP1-213ENST00000597325 HOOK1Q9UJC3 728 aaKnown RBP13.43□□□□□ -0.26
SHKBP1-213ENST00000597325 SCN10AQ9Y5Y9 1956 aa13.43□□□□□ -0.26
SHKBP1-213ENST00000597325 ATG2AQ2TAZ0 1938 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms