RNA–Protein interactions for RNA: ENST00000596351.5

LTBP4-215, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 2

Gene LTBP4, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-215	ENST00000596351	EIF4B	P23588	611 aa	Known RBP	13.61	□□□□□ -0.23
LTBP4-215	ENST00000596351	CYP3A7	P24462	503 aa		13.61	□□□□□ -0.23
LTBP4-215	ENST00000596351	TMOD1	P28289	359 aa		13.61	□□□□□ -0.23
LTBP4-215	ENST00000596351	PBX3	P40426	434 aa		13.61	□□□□□ -0.23
LTBP4-215	ENST00000596351	RBM10	P98175	930 aa	Known RBP	13.61	□□□□□ -0.23
LTBP4-215	ENST00000596351	NONO	Q15233	471 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
LTBP4-215	ENST00000596351	TARBP2	Q15633	366 aa	Known RBP	13.61	□□□□□ -0.23
LTBP4-215	ENST00000596351	SMAD2	Q15796	467 aa	Known RBP	13.61	□□□□□ -0.23
LTBP4-215	ENST00000596351	B3GNT9	Q6UX72	402 aa		13.61	□□□□□ -0.23
LTBP4-215	ENST00000596351	ADHFE1	Q8IWW8	467 aa		13.61	□□□□□ -0.23
LTBP4-215	ENST00000596351	THNSL1	Q8IYQ7	743 aa		13.61	□□□□□ -0.23
LTBP4-215	ENST00000596351	RNF169	Q8NCN4	708 aa		13.61	□□□□□ -0.23
LTBP4-215	ENST00000596351	CWH43	Q9H720	699 aa		13.61	□□□□□ -0.23
LTBP4-215	ENST00000596351	CLEC1B	Q9P126	229 aa		13.61	□□□□□ -0.23
LTBP4-215	ENST00000596351	CD207	Q9UJ71	328 aa		13.61	□□□□□ -0.23
LTBP4-215	ENST00000596351	BARX2	Q9UMQ3	279 aa	Predicted RBP	13.61	□□□□□ -0.23
LTBP4-215	ENST00000596351	FAM50B	Q9Y247	325 aa		13.61	□□□□□ -0.23
LTBP4-215	ENST00000596351	PCDHB12	Q9Y5F1	795 aa		13.61	□□□□□ -0.23
LTBP4-215	ENST00000596351	WDFY4	Q6ZS81	3184 aa		13.6	□□□□□ -0.23
LTBP4-215	ENST00000596351	PER2	O15055	1255 aa		13.6	□□□□□ -0.23
LTBP4-215	ENST00000596351	GPR37L1	O60883	481 aa		13.6	□□□□□ -0.23
LTBP4-215	ENST00000596351	DARS	P14868	501 aa	Known RBP	13.6	□□□□□ -0.23
LTBP4-215	ENST00000596351	ERVFC1	P60507	584 aa		13.6	□□□□□ -0.23
LTBP4-215	ENST00000596351	FAM189B	P81408	668 aa		13.6	□□□□□ -0.23
LTBP4-215	ENST00000596351	SMAD4	Q13485	552 aa	Known RBP	13.6	□□□□□ -0.23
LTBP4-215	ENST00000596351	LETM2	Q2VYF4	491 aa		13.6	□□□□□ -0.23
LTBP4-215	ENST00000596351	CPLX2	Q6PUV4	134 aa	Known RBP	13.6	□□□□□ -0.23
LTBP4-215	ENST00000596351	LRRC55	Q6ZSA7	311 aa		13.6	□□□□□ -0.23
LTBP4-215	ENST00000596351	EFHB	Q8N7U6	833 aa		13.6	□□□□□ -0.23
LTBP4-215	ENST00000596351	OXER1	Q8TDS5	423 aa		13.6	□□□□□ -0.23
LTBP4-215	ENST00000596351	MICAL1	Q8TDZ2	1067 aa		13.6	□□□□□ -0.23
LTBP4-215	ENST00000596351	NLRP7	Q8WX94	980 aa		13.6	□□□□□ -0.23
LTBP4-215	ENST00000596351	PPP2R3C	Q969Q6	453 aa		13.6	□□□□□ -0.23
LTBP4-215	ENST00000596351	MSLNL	Q96KJ4	702 aa		13.6	□□□□□ -0.23
LTBP4-215	ENST00000596351	MBOAT7	Q96N66	472 aa		13.6	□□□□□ -0.23
LTBP4-215	ENST00000596351	CASD1	Q96PB1	797 aa		13.6	□□□□□ -0.23
LTBP4-215	ENST00000596351	CEP89	Q96ST8	783 aa		13.6	□□□□□ -0.23
LTBP4-215	ENST00000596351	PHF20	Q9BVI0	1012 aa		13.6	□□□□□ -0.23
LTBP4-215	ENST00000596351	C22orf23	Q9BZE7	217 aa		13.6	□□□□□ -0.23
LTBP4-215	ENST00000596351	ELAC1	Q9H777	363 aa	Known RBP	13.6	□□□□□ -0.23
LTBP4-215	ENST00000596351	TLR9	Q9NR96	1032 aa		13.6	□□□□□ -0.23
LTBP4-215	ENST00000596351	DDX25	Q9UHL0	483 aa	Known RBP	13.6	□□□□□ -0.23
LTBP4-215	ENST00000596351	TPCN1	Q9ULQ1	816 aa		13.6	□□□□□ -0.23
LTBP4-215	ENST00000596351	ZNF318	Q5VUA4	2279 aa		13.59	□□□□□ -0.23
LTBP4-215	ENST00000596351	C19orf67	A6NJJ6	358 aa		13.59	□□□□□ -0.23
LTBP4-215	ENST00000596351	EML1	O00423	815 aa		13.59	□□□□□ -0.23
LTBP4-215	ENST00000596351	ZSCAN20	P17040	1043 aa	Predicted RBP	13.59	□□□□□ -0.23
LTBP4-215	ENST00000596351	XKR3	Q5GH77	459 aa		13.59	□□□□□ -0.23
LTBP4-215	ENST00000596351	CLLU1OS	Q5K130	101 aa		13.59	□□□□□ -0.23
LTBP4-215	ENST00000596351	PLA2G4F	Q68DD2	849 aa		13.59	□□□□□ -0.23
LTBP4-215	ENST00000596351	MOXD1	Q6UVY6	613 aa		13.59	□□□□□ -0.23
LTBP4-215	ENST00000596351	KRT25	Q7Z3Z0	450 aa		13.59	□□□□□ -0.23
LTBP4-215	ENST00000596351	ECHDC2	Q86YB7	292 aa		13.59	□□□□□ -0.23
LTBP4-215	ENST00000596351	VN1R2	Q8NFZ6	395 aa		13.59	□□□□□ -0.23
LTBP4-215	ENST00000596351	RDM1	Q8NG50	284 aa		13.59	□□□□□ -0.23
LTBP4-215	ENST00000596351	NIFK	Q9BYG3	293 aa	Known RBP	13.59	□□□□□ -0.23
LTBP4-215	ENST00000596351	TMEM117	Q9H0C3	514 aa		13.59	□□□□□ -0.23
LTBP4-215	ENST00000596351	SLK	Q9H2G2	1235 aa	Predicted RBP	13.59	□□□□□ -0.23
LTBP4-215	ENST00000596351	TLE6	Q9H808	572 aa		13.59	□□□□□ -0.23
LTBP4-215	ENST00000596351	AAAS	Q9NRG9	546 aa		13.59	□□□□□ -0.23
LTBP4-215	ENST00000596351	RNF216	Q9NWF9	866 aa	Predicted RBP	13.59	□□□□□ -0.23
LTBP4-215	ENST00000596351	PRKAG3	Q9UGI9	489 aa		13.59	□□□□□ -0.23
LTBP4-215	ENST00000596351	TECTA	O75443	2155 aa		13.59	□□□□□ -0.23
LTBP4-215	ENST00000596351		A0A087WZ62	844 aa		13.58	□□□□□ -0.24
LTBP4-215	ENST00000596351	FAM205C	A6NFA0	338 aa		13.58	□□□□□ -0.24
LTBP4-215	ENST00000596351	DDX11L8	A8MPP1	907 aa		13.58	□□□□□ -0.24
LTBP4-215	ENST00000596351	DCX	O43602	365 aa		13.58	□□□□□ -0.24
LTBP4-215	ENST00000596351	CTDNEP1	O95476	244 aa		13.58	□□□□□ -0.24
LTBP4-215	ENST00000596351	NEFL	P07196	543 aa		13.58	□□□□□ -0.24
LTBP4-215	ENST00000596351	ATF7	P17544	494 aa	Predicted RBP	13.58	□□□□□ -0.24
LTBP4-215	ENST00000596351	LAG3	P18627	525 aa		13.58	□□□□□ -0.24
LTBP4-215	ENST00000596351	PLA2G5	P39877	138 aa		13.58	□□□□□ -0.24
LTBP4-215	ENST00000596351	PLPP4	Q5VZY2	271 aa		13.58	□□□□□ -0.24
LTBP4-215	ENST00000596351	GALNT17	Q6IS24	598 aa		13.58	□□□□□ -0.24
LTBP4-215	ENST00000596351	PIK3AP1	Q6ZUJ8	805 aa		13.58	□□□□□ -0.24
LTBP4-215	ENST00000596351	KSR1	Q8IVT5	923 aa		13.58	□□□□□ -0.24
LTBP4-215	ENST00000596351	HELQ	Q8TDG4	1101 aa		13.58	□□□□□ -0.24
LTBP4-215	ENST00000596351	FDXACB1	Q9BRP7	624 aa	Predicted RBP	13.58	□□□□□ -0.24
LTBP4-215	ENST00000596351	VAV3	Q9UKW4	847 aa		13.58	□□□□□ -0.24
LTBP4-215	ENST00000596351	HCN4	Q9Y3Q4	1203 aa		13.58	□□□□□ -0.24
LTBP4-215	ENST00000596351	STK36	Q9NRP7	1315 aa		13.58	□□□□□ -0.24
LTBP4-215	ENST00000596351	IGKV6-21	A0A0C4DH24	114 aa		13.57	□□□□□ -0.24
LTBP4-215	ENST00000596351	CCDC194	A0A1B0GVG4	234 aa		13.57	□□□□□ -0.24
LTBP4-215	ENST00000596351	FSCN2	O14926	492 aa		13.57	□□□□□ -0.24
LTBP4-215	ENST00000596351	PFKFB2	O60825	505 aa		13.57	□□□□□ -0.24
LTBP4-215	ENST00000596351	LARGE1	O95461	756 aa		13.57	□□□□□ -0.24
LTBP4-215	ENST00000596351	ALAD	P13716	330 aa		13.57	□□□□□ -0.24
LTBP4-215	ENST00000596351	NPEPPS	P55786	919 aa		13.57	□□□□□ -0.24
LTBP4-215	ENST00000596351	UBE3A	Q05086	875 aa		13.57	□□□□□ -0.24
LTBP4-215	ENST00000596351	DUSP6	Q16828	381 aa		13.57	□□□□□ -0.24
LTBP4-215	ENST00000596351	LONRF3	Q496Y0	759 aa		13.57	□□□□□ -0.24
LTBP4-215	ENST00000596351	EARS2	Q5JPH6	523 aa	Known RBP	13.57	□□□□□ -0.24
LTBP4-215	ENST00000596351	KCNT2	Q6UVM3	1135 aa		13.57	□□□□□ -0.24
LTBP4-215	ENST00000596351	FAM43B	Q6ZT52	329 aa	Predicted RBP	13.57	□□□□□ -0.24
LTBP4-215	ENST00000596351	ANO5	Q75V66	913 aa		13.57	□□□□□ -0.24
LTBP4-215	ENST00000596351	NEK8	Q86SG6	692 aa		13.57	□□□□□ -0.24
LTBP4-215	ENST00000596351	ZNF598	Q86UK7	904 aa	Known RBP	13.57	□□□□□ -0.24
LTBP4-215	ENST00000596351	RHPN2	Q8IUC4	686 aa		13.57	□□□□□ -0.24
LTBP4-215	ENST00000596351	ABI1	Q8IZP0	508 aa		13.57	□□□□□ -0.24
LTBP4-215	ENST00000596351	LRRC43	Q8N309	656 aa		13.57	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms