RNA–Protein interactions for RNA: ENST00000594399.1

USE1-204, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-204ENST00000594399 RBM43Q6ZSC3 357 aaKnown RBP12.01□□□□□ -0.49
USE1-204ENST00000594399 UBE2Q1Q7Z7E8 422 aa12.01□□□□□ -0.49
USE1-204ENST00000594399 DAW1Q8N136 415 aa12.01□□□□□ -0.49
USE1-204ENST00000594399 LRRC71Q8N4P6 559 aa12.01□□□□□ -0.49
USE1-204ENST00000594399 METTL13Q8N6R0 699 aa12.01□□□□□ -0.49
USE1-204ENST00000594399 LINC01465Q8N7H1 131 aa12.01□□□□□ -0.49
USE1-204ENST00000594399 SLC43A3Q8NBI5 491 aa12.01□□□□□ -0.49
USE1-204ENST00000594399 SPATA20Q8TB22 786 aa12.01□□□□□ -0.49
USE1-204ENST00000594399 DIS3LQ8TF46 1054 aaKnown RBP12.01□□□□□ -0.49
USE1-204ENST00000594399 PSPC1Q8WXF1 523 aaKnown RBP12.01□□□□□ -0.49
USE1-204ENST00000594399 DPF3Q92784 378 aa12.01□□□□□ -0.49
USE1-204ENST00000594399 TMEM143Q96AN5 459 aa12.01□□□□□ -0.49
USE1-204ENST00000594399 ZBTB10Q96DT7 871 aa12.01□□□□□ -0.49
USE1-204ENST00000594399 GSDMAQ96QA5 445 aa12.01□□□□□ -0.49
USE1-204ENST00000594399 MAP7D2Q96T17 732 aa12.01□□□□□ -0.49
USE1-204ENST00000594399 SENP6Q9GZR1 1112 aaPredicted RBP12.01□□□□□ -0.49
USE1-204ENST00000594399 ZHX3Q9H4I2 956 aa12.01□□□□□ -0.49
USE1-204ENST00000594399 SUGCTQ9HAC7 445 aa12.01□□□□□ -0.49
USE1-204ENST00000594399 PARVGQ9HBI0 331 aa12.01□□□□□ -0.49
USE1-204ENST00000594399 PANK4Q9NVE7 773 aa12.01□□□□□ -0.49
USE1-204ENST00000594399 RMND1Q9NWS8 449 aa12.01□□□□□ -0.49
USE1-204ENST00000594399 PCDHA5Q9Y5H7 936 aa12.01□□□□□ -0.49
USE1-204ENST00000594399 PCDHA2Q9Y5H9 948 aa12.01□□□□□ -0.49
USE1-204ENST00000594399 COL4A3BPQ9Y5P4 624 aa12.01□□□□□ -0.49
USE1-204ENST00000594399 SMIM35A0A1B0GVV1 85 aa12□□□□□ -0.49
USE1-204ENST00000594399 TREHO43280 583 aa12□□□□□ -0.49
USE1-204ENST00000594399 KLRC4O43908 158 aa12□□□□□ -0.49
USE1-204ENST00000594399 LETM1O95202 739 aaPredicted RBP12□□□□□ -0.49
USE1-204ENST00000594399 CYP2C9P11712 490 aa12□□□□□ -0.49
USE1-204ENST00000594399 COL6A1P12109 1028 aa12□□□□□ -0.49
USE1-204ENST00000594399 ZNF131P52739 623 aa12□□□□□ -0.49
USE1-204ENST00000594399 DMP1Q13316 513 aaPredicted RBP12□□□□□ -0.49
USE1-204ENST00000594399 HIC1Q14526 733 aa12□□□□□ -0.49
USE1-204ENST00000594399 KCNB1Q14721 858 aa12□□□□□ -0.49
USE1-204ENST00000594399 KMT5BQ4FZB7 885 aa12□□□□□ -0.49
USE1-204ENST00000594399 IER5Q5VY09 327 aa12□□□□□ -0.49
USE1-204ENST00000594399 TAF2Q6P1X5 1199 aa12□□□□□ -0.49
USE1-204ENST00000594399 NECAB2Q7Z6G3 386 aa12□□□□□ -0.49
USE1-204ENST00000594399 LARSQ9P2J5 1176 aaKnown RBP12□□□□□ -0.49
USE1-204ENST00000594399 SUCLA2Q9P2R7 463 aaPredicted RBP12□□□□□ -0.49
USE1-204ENST00000594399 SEL1LQ9UBV2 794 aa12□□□□□ -0.49
USE1-204ENST00000594399 NOD1Q9Y239 953 aa12□□□□□ -0.49
USE1-204ENST00000594399 MROH7Q68CQ1 1323 aa12□□□□□ -0.49
USE1-204ENST00000594399 SFI1A8K8P3 1242 aa11.99□□□□□ -0.49
USE1-204ENST00000594399 RHOBTB3O94955 611 aa11.99□□□□□ -0.49
USE1-204ENST00000594399 PLS3P13797 630 aa11.99□□□□□ -0.49
USE1-204ENST00000594399 ARL2P36404 184 aa11.99□□□□□ -0.49
USE1-204ENST00000594399 NAMPTP43490 491 aa11.99□□□□□ -0.49
USE1-204ENST00000594399 SARSP49591 514 aaKnown RBP11.99□□□□□ -0.49
USE1-204ENST00000594399 RTP1P59025 263 aa11.99□□□□□ -0.49
USE1-204ENST00000594399 ZNF200P98182 395 aaPredicted RBP11.99□□□□□ -0.49
USE1-204ENST00000594399 MKRN4PQ13434 485 aaPredicted RBP11.99□□□□□ -0.49
USE1-204ENST00000594399 DRP2Q13474 957 aa11.99□□□□□ -0.49
USE1-204ENST00000594399 MXD4Q14582 209 aaPredicted RBP11.99□□□□□ -0.49
USE1-204ENST00000594399 PPP2R5AQ15172 486 aa11.99□□□□□ -0.49
USE1-204ENST00000594399 PTGISQ16647 500 aa11.99□□□□□ -0.49
USE1-204ENST00000594399 ZSCAN23Q3MJ62 389 aa11.99□□□□□ -0.49
USE1-204ENST00000594399 HERC4Q5GLZ8 1057 aaPredicted RBP11.99□□□□□ -0.49
USE1-204ENST00000594399 FAM26FQ5R3K3 315 aa11.99□□□□□ -0.49
USE1-204ENST00000594399 ODR4Q5SWX8 454 aa11.99□□□□□ -0.49
USE1-204ENST00000594399 RUFY4Q6ZNE9 571 aa11.99□□□□□ -0.49
USE1-204ENST00000594399 SERINC5Q86VE9 423 aa11.99□□□□□ -0.49
USE1-204ENST00000594399 SFR1Q86XK3 245 aa11.99□□□□□ -0.49
USE1-204ENST00000594399 MYCT1Q8N699 235 aa11.99□□□□□ -0.49
USE1-204ENST00000594399 TRIML1Q8N9V2 468 aa11.99□□□□□ -0.49
USE1-204ENST00000594399 ASAP3Q8TDY4 903 aa11.99□□□□□ -0.49
USE1-204ENST00000594399 PRPF31Q8WWY3 499 aaKnown RBP11.99□□□□□ -0.49
USE1-204ENST00000594399 IFT74Q96LB3 600 aa11.99□□□□□ -0.49
USE1-204ENST00000594399 FAM49AQ9H0Q0 323 aaPredicted RBP11.99□□□□□ -0.49
USE1-204ENST00000594399 C11orf49Q9H6J7 331 aa11.99□□□□□ -0.49
USE1-204ENST00000594399 C17orf75Q9HAS0 396 aa11.99□□□□□ -0.49
USE1-204ENST00000594399 POLD4Q9HCU8 107 aa11.99□□□□□ -0.49
USE1-204ENST00000594399 OLFML3Q9NRN5 406 aa11.99□□□□□ -0.49
USE1-204ENST00000594399 TRMT13Q9NUP7 481 aaKnown RBP11.99□□□□□ -0.49
USE1-204ENST00000594399 MAN1B1Q9UKM7 699 aa11.99□□□□□ -0.49
USE1-204ENST00000594399 AKT3Q9Y243 479 aa11.99□□□□□ -0.49
USE1-204ENST00000594399 NR2E3Q9Y5X4 410 aa11.99□□□□□ -0.49
USE1-204ENST00000594399 MYH11P35749 1972 aa11.99□□□□□ -0.49
USE1-204ENST00000594399 KAT6AQ92794 2004 aa11.99□□□□□ -0.49
USE1-204ENST00000594399 SYCE3A1L190 88 aa11.98□□□□□ -0.49
USE1-204ENST00000594399 BIN1O00499 593 aa11.98□□□□□ -0.49
USE1-204ENST00000594399 RPLP2P05387 115 aaKnown RBP11.98□□□□□ -0.49
USE1-204ENST00000594399 GLRA2P23416 452 aa11.98□□□□□ -0.49
USE1-204ENST00000594399 CDK7P50613 346 aa11.98□□□□□ -0.49
USE1-204ENST00000594399 ATN1P54259 1190 aaPredicted RBP11.98□□□□□ -0.49
USE1-204ENST00000594399 PEX3P56589 373 aa11.98□□□□□ -0.49
USE1-204ENST00000594399 EHHADHQ08426 723 aa11.98□□□□□ -0.49
USE1-204ENST00000594399 LAMTOR4Q0VGL1 99 aa11.98□□□□□ -0.49
USE1-204ENST00000594399 PTK7Q13308 1070 aa11.98□□□□□ -0.49
USE1-204ENST00000594399 CAPSQ13938 189 aa11.98□□□□□ -0.49
USE1-204ENST00000594399 TFDP1Q14186 410 aa11.98□□□□□ -0.49
USE1-204ENST00000594399 SASS6Q6UVJ0 657 aa11.98□□□□□ -0.49
USE1-204ENST00000594399 RSPH3Q86UC2 560 aa11.98□□□□□ -0.49
USE1-204ENST00000594399 RHPN2Q8IUC4 686 aa11.98□□□□□ -0.49
USE1-204ENST00000594399 FAM178BQ8IXR5 827 aa11.98□□□□□ -0.49
USE1-204ENST00000594399 SLC17A8Q8NDX2 589 aa11.98□□□□□ -0.49
USE1-204ENST00000594399 DEPTORQ8TB45 409 aa11.98□□□□□ -0.49
USE1-204ENST00000594399 BSNDQ8WZ55 320 aa11.98□□□□□ -0.49
USE1-204ENST00000594399 PAWRQ96IZ0 340 aaKnown RBP11.98□□□□□ -0.49
USE1-204ENST00000594399 GTPBP4Q9BZE4 634 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms