RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 NCKAP1LP55160 1127 aa22.92■■□□□ 1.26
PNKP-203ENST00000593946 PEX3P56589 373 aa22.92■■□□□ 1.26
PNKP-203ENST00000593946 SOX10P56693 466 aa22.92■■□□□ 1.26
PNKP-203ENST00000593946 FKBP3Q00688 224 aaKnown RBP22.92■■□□□ 1.26
PNKP-203ENST00000593946 FAM114A1Q8IWE2 563 aa22.92■■□□□ 1.26
PNKP-203ENST00000593946 ZC3H3Q8IXZ2 948 aaKnown RBP22.92■■□□□ 1.26
PNKP-203ENST00000593946 SLC17A8Q8NDX2 589 aa22.92■■□□□ 1.26
PNKP-203ENST00000593946 ANKRD20A12PQ8NF67 263 aa22.92■■□□□ 1.26
PNKP-203ENST00000593946 SLC7A3Q8WY07 619 aa22.92■■□□□ 1.26
PNKP-203ENST00000593946 EEF2KMTQ96G04 330 aa22.92■■□□□ 1.26
PNKP-203ENST00000593946 TYW1Q9NV66 732 aaKnown RBP22.92■■□□□ 1.26
PNKP-203ENST00000593946 NRBP1Q9UHY1 535 aa22.92■■□□□ 1.26
PNKP-203ENST00000593946 PRKCZQ05513 592 aa22.91■■□□□ 1.26
PNKP-203ENST00000593946 DMP1Q13316 513 aaPredicted RBP22.91■■□□□ 1.26
PNKP-203ENST00000593946 SPC24Q8NBT2 197 aa22.91■■□□□ 1.26
PNKP-203ENST00000593946 SPIRE2Q8WWL2 714 aa22.91■■□□□ 1.26
PNKP-203ENST00000593946 BSNDQ8WZ55 320 aa22.91■■□□□ 1.26
PNKP-203ENST00000593946 C16orf70Q9BSU1 422 aa22.91■■□□□ 1.26
PNKP-203ENST00000593946 SIP14410 1827 aa22.91■■□□□ 1.26
PNKP-203ENST00000593946 HBP1O60381 514 aa22.91■■□□□ 1.26
PNKP-203ENST00000593946 MAFO75444 373 aaPredicted RBP22.91■■□□□ 1.26
PNKP-203ENST00000593946 TPM3P06753 285 aa22.91■■□□□ 1.26
PNKP-203ENST00000593946 NPTX2P47972 431 aa22.91■■□□□ 1.26
PNKP-203ENST00000593946 DRC7Q8IY82 874 aa22.91■■□□□ 1.26
PNKP-203ENST00000593946 TRIB2Q92519 343 aa22.91■■□□□ 1.26
PNKP-203ENST00000593946 CNOT6LQ96LI5 555 aaKnown RBP22.91■■□□□ 1.26
PNKP-203ENST00000593946 NTPCRQ9BSD7 190 aaKnown RBP22.91■■□□□ 1.26
PNKP-203ENST00000593946 POLR3FQ9H1D9 316 aaPredicted RBP22.91■■□□□ 1.26
PNKP-203ENST00000593946 MAGEC2Q9UBF1 373 aaPredicted RBP22.91■■□□□ 1.26
PNKP-203ENST00000593946 GTF2BQ00403 316 aa22.9■■□□□ 1.26
PNKP-203ENST00000593946 NR1I3Q14994 352 aa22.9■■□□□ 1.26
PNKP-203ENST00000593946 TLK2Q86UE8 772 aa22.9■■□□□ 1.26
PNKP-203ENST00000593946 CEP63Q96MT8 703 aa22.9■■□□□ 1.26
PNKP-203ENST00000593946 FAM184BQ9ULE4 1060 aa22.9■■□□□ 1.26
PNKP-203ENST00000593946 A6NJR5 290 aa22.89■■□□□ 1.26
PNKP-203ENST00000593946 SLC16A4O15374 487 aa22.89■■□□□ 1.26
PNKP-203ENST00000593946 TGFB1I1O43294 461 aa22.89■■□□□ 1.26
PNKP-203ENST00000593946 ZNF286BP0CG31 522 aa22.89■■□□□ 1.26
PNKP-203ENST00000593946 COPB1P53618 953 aaKnown RBP22.89■■□□□ 1.26
PNKP-203ENST00000593946 SMTNP53814 917 aa22.89■■□□□ 1.26
PNKP-203ENST00000593946 DGKDQ16760 1214 aa22.89■■□□□ 1.26
PNKP-203ENST00000593946 HAUS6Q7Z4H7 955 aa22.89■■□□□ 1.26
PNKP-203ENST00000593946 KSR1Q8IVT5 923 aa22.89■■□□□ 1.26
PNKP-203ENST00000593946 RNPEPQ9H4A4 650 aa22.89■■□□□ 1.26
PNKP-203ENST00000593946 TRPC6Q9Y210 931 aa22.89■■□□□ 1.26
PNKP-203ENST00000593946 Q9Y3F1 56 aa22.89■■□□□ 1.26
PNKP-203ENST00000593946 CENPFP49454 3210 aa22.89■■□□□ 1.25
PNKP-203ENST00000593946 DYNC1LI2O43237 492 aaPredicted RBP22.88■■□□□ 1.25
PNKP-203ENST00000593946 CALUO43852 315 aaPredicted RBP22.88■■□□□ 1.25
PNKP-203ENST00000593946 PTMAP06454 111 aaKnown RBP22.88■■□□□ 1.25
PNKP-203ENST00000593946 CYBAP13498 195 aa22.88■■□□□ 1.25
PNKP-203ENST00000593946 ARL2P36404 184 aa22.88■■□□□ 1.25
PNKP-203ENST00000593946 TBC1D8BQ0IIM8 1120 aa22.88■■□□□ 1.25
PNKP-203ENST00000593946 MFSD14CQ5VZR4 134 aa22.88■■□□□ 1.25
PNKP-203ENST00000593946 EXOC8Q8IYI6 725 aa22.88■■□□□ 1.25
PNKP-203ENST00000593946 TMEM161BQ8NDZ6 487 aa22.88■■□□□ 1.25
PNKP-203ENST00000593946 TMEM143Q96AN5 459 aa22.88■■□□□ 1.25
PNKP-203ENST00000593946 LENG1Q96BZ8 264 aaPredicted RBP22.88■■□□□ 1.25
PNKP-203ENST00000593946 RTN4Q9NQC3 1192 aaKnown RBP22.88■■□□□ 1.25
PNKP-203ENST00000593946 TAB2Q9NYJ8 693 aa22.88■■□□□ 1.25
PNKP-203ENST00000593946 IGKV6-21A0A0C4DH24 114 aa22.88■■□□□ 1.25
PNKP-203ENST00000593946 GAS2O43903 313 aaKnown RBP22.88■■□□□ 1.25
PNKP-203ENST00000593946 NFIL3Q16649 462 aa22.88■■□□□ 1.25
PNKP-203ENST00000593946 FILIP1LQ4L180 1135 aa22.88■■□□□ 1.25
PNKP-203ENST00000593946 VSTM4Q8IW00 320 aa22.88■■□□□ 1.25
PNKP-203ENST00000593946 TRPV1Q8NER1 839 aa22.88■■□□□ 1.25
PNKP-203ENST00000593946 IFT74Q96LB3 600 aa22.88■■□□□ 1.25
PNKP-203ENST00000593946 KMT5AQ9NQR1 393 aa22.88■■□□□ 1.25
PNKP-203ENST00000593946 ZNF215Q9UL58 517 aaPredicted RBP22.88■■□□□ 1.25
PNKP-203ENST00000593946 CCDC169A6NNP5 214 aa22.87■■□□□ 1.25
PNKP-203ENST00000593946 GOLGA6L6A8MZA4 724 aa22.87■■□□□ 1.25
PNKP-203ENST00000593946 H3BRB1 525 aa22.87■■□□□ 1.25
PNKP-203ENST00000593946 AKR1A1P14550 325 aa22.87■■□□□ 1.25
PNKP-203ENST00000593946 NR2F2P24468 414 aa22.87■■□□□ 1.25
PNKP-203ENST00000593946 HS1BP3Q53T59 392 aa22.87■■□□□ 1.25
PNKP-203ENST00000593946 FILIP1Q7Z7B0 1213 aa22.87■■□□□ 1.25
PNKP-203ENST00000593946 CREBRFQ8IUR6 639 aa22.87■■□□□ 1.25
PNKP-203ENST00000593946 HVCN1Q96D96 273 aa22.87■■□□□ 1.25
PNKP-203ENST00000593946 TRIM44Q96DX7 344 aaPredicted RBP22.87■■□□□ 1.25
PNKP-203ENST00000593946 TUBGCP2Q9BSJ2 902 aa22.87■■□□□ 1.25
PNKP-203ENST00000593946 GBP3Q9H0R5 595 aa22.87■■□□□ 1.25
PNKP-203ENST00000593946 IKZF4Q9H2S9 585 aa22.87■■□□□ 1.25
PNKP-203ENST00000593946 TUT1Q9H6E5 874 aaKnown RBP22.87■■□□□ 1.25
PNKP-203ENST00000593946 ADGRA3Q8IWK6 1321 aa22.87■■□□□ 1.25
PNKP-203ENST00000593946 GPR25O00155 361 aa22.86■■□□□ 1.25
PNKP-203ENST00000593946 ADAM9Q13443 819 aa22.86■■□□□ 1.25
PNKP-203ENST00000593946 ZNF484Q5JVG2 852 aa22.86■■□□□ 1.25
PNKP-203ENST00000593946 CD99L2Q8TCZ2 262 aa22.86■■□□□ 1.25
PNKP-203ENST00000593946 ACCSQ96QU6 501 aa22.86■■□□□ 1.25
PNKP-203ENST00000593946 KIFC3Q9BVG8 833 aa22.86■■□□□ 1.25
PNKP-203ENST00000593946 VPS16Q9H269 839 aa22.86■■□□□ 1.25
PNKP-203ENST00000593946 TMEM206Q9H813 350 aa22.86■■□□□ 1.25
PNKP-203ENST00000593946 KCNG1Q9UIX4 513 aa22.86■■□□□ 1.25
PNKP-203ENST00000593946 HTTP42858 3142 aa22.86■■□□□ 1.25
PNKP-203ENST00000593946 N4BP3O15049 544 aa22.85■■□□□ 1.25
PNKP-203ENST00000593946 CETN3O15182 167 aa22.85■■□□□ 1.25
PNKP-203ENST00000593946 TEX33O43247 280 aa22.85■■□□□ 1.25
PNKP-203ENST00000593946 NR3C1P04150 777 aa22.85■■□□□ 1.25
PNKP-203ENST00000593946 GLRA2P23416 452 aa22.85■■□□□ 1.25
PNKP-203ENST00000593946 MARSP56192 900 aaKnown RBP22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms