RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 GPC3P51654 580 aa16.6■□□□□ 0.25
DDX39A-221ENST00000593026 NLRP11P59045 1033 aaKnown RBP16.6■□□□□ 0.25
DDX39A-221ENST00000593026 CDC42EP1Q00587 391 aa16.6■□□□□ 0.25
DDX39A-221ENST00000593026 FBXO47Q5MNV8 452 aa16.6■□□□□ 0.25
DDX39A-221ENST00000593026 AXDND1Q5T1B0 1012 aaPredicted RBP16.6■□□□□ 0.25
DDX39A-221ENST00000593026 ZNF365Q70YC5 407 aa16.6■□□□□ 0.25
DDX39A-221ENST00000593026 C16orf59Q7L2K0 433 aa16.6■□□□□ 0.25
DDX39A-221ENST00000593026 RHPN2Q8IUC4 686 aa16.6■□□□□ 0.25
DDX39A-221ENST00000593026 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.6■□□□□ 0.252e-12■■□□□ 12.1
DDX39A-221ENST00000593026 GPR32O75388 356 aa16.59■□□□□ 0.25
DDX39A-221ENST00000593026 FGBP02675 491 aa16.59■□□□□ 0.25
DDX39A-221ENST00000593026 CYP11B2P19099 503 aa16.59■□□□□ 0.25
DDX39A-221ENST00000593026 CRYBB1P53674 252 aaPredicted RBP16.59■□□□□ 0.25
DDX39A-221ENST00000593026 LPIN1Q14693 890 aa16.59■□□□□ 0.25
DDX39A-221ENST00000593026 TMEM240Q5SV17 173 aa16.59■□□□□ 0.25
DDX39A-221ENST00000593026 SHC4Q6S5L8 630 aa16.59■□□□□ 0.25
DDX39A-221ENST00000593026 MAEAQ7L5Y9 396 aa16.59■□□□□ 0.25
DDX39A-221ENST00000593026 USP38Q8NB14 1042 aa16.59■□□□□ 0.25
DDX39A-221ENST00000593026 NLRP7Q8WX94 980 aa16.59■□□□□ 0.25
DDX39A-221ENST00000593026 VWCEQ96DN2 955 aa16.59■□□□□ 0.25
DDX39A-221ENST00000593026 ZNF668Q96K58 619 aaPredicted RBP16.59■□□□□ 0.25
DDX39A-221ENST00000593026 NLRP4Q96MN2 994 aa16.59■□□□□ 0.25
DDX39A-221ENST00000593026 OSMRQ99650 979 aa16.59■□□□□ 0.25
DDX39A-221ENST00000593026 OSBPL7Q9BZF2 842 aa16.59■□□□□ 0.25
DDX39A-221ENST00000593026 ADAMTS10Q9H324 1103 aa16.59■□□□□ 0.25
DDX39A-221ENST00000593026 PRO3102Q9H379 93 aa16.59■□□□□ 0.25
DDX39A-221ENST00000593026 CDHR5Q9HBB8 845 aa16.59■□□□□ 0.25
DDX39A-221ENST00000593026 COL4A3BPQ9Y5P4 624 aa16.59■□□□□ 0.25
DDX39A-221ENST00000593026 TCHHQ07283 1943 aa16.58■□□□□ 0.25
DDX39A-221ENST00000593026 ASAP2O43150 1006 aa16.58■□□□□ 0.24
DDX39A-221ENST00000593026 PLA2G4BP0C869 781 aa16.58■□□□□ 0.24
DDX39A-221ENST00000593026 ACTN1P12814 892 aa16.58■□□□□ 0.24
DDX39A-221ENST00000593026 LAMTOR4Q0VGL1 99 aa16.58■□□□□ 0.24
DDX39A-221ENST00000593026 MXD4Q14582 209 aaPredicted RBP16.58■□□□□ 0.24
DDX39A-221ENST00000593026 C9orf50Q5SZB4 431 aa16.58■□□□□ 0.24
DDX39A-221ENST00000593026 FAM102BQ5T8I3 360 aa16.58■□□□□ 0.24
DDX39A-221ENST00000593026 RRAGBQ5VZM2 374 aa16.58■□□□□ 0.24
DDX39A-221ENST00000593026 CNKSR3Q6P9H4 555 aa16.58■□□□□ 0.24
DDX39A-221ENST00000593026 CCDC73Q6ZRK6 1079 aa16.58■□□□□ 0.24
DDX39A-221ENST00000593026 TSHZ1Q6ZSZ6 1077 aa16.58■□□□□ 0.24
DDX39A-221ENST00000593026 ZNF410Q86VK4 478 aa16.58■□□□□ 0.24
DDX39A-221ENST00000593026 SYT2Q8N9I0 419 aaPredicted RBP16.58■□□□□ 0.24
DDX39A-221ENST00000593026 PRPF31Q8WWY3 499 aaKnown RBP16.58■□□□□ 0.24
DDX39A-221ENST00000593026 SEPT8Q92599 483 aa16.58■□□□□ 0.24
DDX39A-221ENST00000593026 RAD54LQ92698 747 aa16.58■□□□□ 0.24
DDX39A-221ENST00000593026 IFIH1Q9BYX4 1025 aaKnown RBP16.58■□□□□ 0.24
DDX39A-221ENST00000593026 POLR3FQ9H1D9 316 aaPredicted RBP16.58■□□□□ 0.24
DDX39A-221ENST00000593026 GDPD2Q9HCC8 539 aa16.58■□□□□ 0.24
DDX39A-221ENST00000593026 STK17AQ9UEE5 414 aa16.58■□□□□ 0.24
DDX39A-221ENST00000593026 SQORQ9Y6N5 450 aa16.58■□□□□ 0.24
DDX39A-221ENST00000593026 A0A087WZ62 844 aa16.57■□□□□ 0.24
DDX39A-221ENST00000593026 ARL2P36404 184 aa16.57■□□□□ 0.24
DDX39A-221ENST00000593026 STAT6P42226 847 aa16.57■□□□□ 0.24
DDX39A-221ENST00000593026 SLC12A3P55017 1021 aa16.57■□□□□ 0.24
DDX39A-221ENST00000593026 PAK2Q13177 524 aa16.57■□□□□ 0.24
DDX39A-221ENST00000593026 MCM6Q14566 821 aa16.57■□□□□ 0.24
DDX39A-221ENST00000593026 SHHQ15465 462 aa16.57■□□□□ 0.24
DDX39A-221ENST00000593026 PLEKHG4Q58EX7 1191 aa16.57■□□□□ 0.24
DDX39A-221ENST00000593026 RINT1Q6NUQ1 792 aa16.57■□□□□ 0.24
DDX39A-221ENST00000593026 OTOP2Q7RTS6 562 aa16.57■□□□□ 0.24
DDX39A-221ENST00000593026 KSR1Q8IVT5 923 aa16.57■□□□□ 0.24
DDX39A-221ENST00000593026 TDHQ8IZJ6 230 aa16.57■□□□□ 0.24
DDX39A-221ENST00000593026 PDILTQ8N807 584 aa16.57■□□□□ 0.24
DDX39A-221ENST00000593026 DBF4BQ8NFT6 615 aa16.57■□□□□ 0.24
DDX39A-221ENST00000593026 LRRC15Q8TF66 581 aa16.57■□□□□ 0.24
DDX39A-221ENST00000593026 TMEM40Q8WWA1 233 aa16.57■□□□□ 0.24
DDX39A-221ENST00000593026 LARP4BQ92615 738 aaKnown RBP16.57■□□□□ 0.24
DDX39A-221ENST00000593026 APBB2Q92870 758 aa16.57■□□□□ 0.24
DDX39A-221ENST00000593026 FDXACB1Q9BRP7 624 aaPredicted RBP16.57■□□□□ 0.24
DDX39A-221ENST00000593026 RUSC1Q9BVN2 902 aa16.57■□□□□ 0.24
DDX39A-221ENST00000593026 PANK2Q9BZ23 570 aa16.57■□□□□ 0.24
DDX39A-221ENST00000593026 MTIF3Q9H2K0 278 aaKnown RBP16.57■□□□□ 0.24
DDX39A-221ENST00000593026 GPRC5CQ9NQ84 441 aa16.57■□□□□ 0.24
DDX39A-221ENST00000593026 BLOC1S4Q9NUP1 217 aa16.57■□□□□ 0.24
DDX39A-221ENST00000593026 FAM13BQ9NYF5 915 aa16.57■□□□□ 0.24
DDX39A-221ENST00000593026 A0A087X0B3 334 aa16.56■□□□□ 0.24
DDX39A-221ENST00000593026 RBAK-RBAKDNI3L0D1 243 aa16.56■□□□□ 0.24
DDX39A-221ENST00000593026 RPS6KA5O75582 802 aa16.56■□□□□ 0.24
DDX39A-221ENST00000593026 DARSP14868 501 aaKnown RBP16.56■□□□□ 0.24
DDX39A-221ENST00000593026 EIF4BP23588 611 aaKnown RBP16.56■□□□□ 0.24
DDX39A-221ENST00000593026 CD52P31358 61 aa16.56■□□□□ 0.24
DDX39A-221ENST00000593026 TFDP1Q14186 410 aa16.56■□□□□ 0.24
DDX39A-221ENST00000593026 DHX8Q14562 1220 aaKnown RBP16.56■□□□□ 0.24
DDX39A-221ENST00000593026 ODR4Q5SWX8 454 aa16.56■□□□□ 0.24
DDX39A-221ENST00000593026 RESP18Q5W5W9 173 aa16.56■□□□□ 0.24
DDX39A-221ENST00000593026 ADALQ6DHV7 355 aa16.56■□□□□ 0.24
DDX39A-221ENST00000593026 C1orf186Q6ZWK4 172 aa16.56■□□□□ 0.24
DDX39A-221ENST00000593026 GPBP1Q86WP2 473 aa16.56■□□□□ 0.24
DDX39A-221ENST00000593026 RNF149Q8NC42 400 aa16.56■□□□□ 0.24
DDX39A-221ENST00000593026 TET1Q8NFU7 2136 aa16.56■□□□□ 0.24
DDX39A-221ENST00000593026 ASAP3Q8TDY4 903 aa16.56■□□□□ 0.24
DDX39A-221ENST00000593026 HERVK_113Q902F9 699 aa16.56■□□□□ 0.24
DDX39A-221ENST00000593026 RNPC3Q96LT9 517 aaKnown RBP16.56■□□□□ 0.24
DDX39A-221ENST00000593026 GCOM2Q9BZD3 368 aaPredicted RBP16.56■□□□□ 0.24
DDX39A-221ENST00000593026 AGO3Q9H9G7 860 aaKnown RBP16.56■□□□□ 0.24
DDX39A-221ENST00000593026 KCND2Q9NZV8 630 aa16.56■□□□□ 0.24
DDX39A-221ENST00000593026 NOC2LQ9Y3T9 749 aaKnown RBP16.56■□□□□ 0.24
DDX39A-221ENST00000593026 ZBBXA8MT70 800 aa16.55■□□□□ 0.24
DDX39A-221ENST00000593026 GPR182O15218 404 aa16.55■□□□□ 0.24
DDX39A-221ENST00000593026 HIP1RO75146 1068 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms