RNA–Protein interactions for RNA: ENST00000590388.5

TUBB6-208, Transcript of tubulin beta 6 class V, human

TSL 4

Gene TUBB6, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBB6-208	ENST00000590388	XKR9	Q5GH70	373 aa		13.93	□□□□□ -0.18
TUBB6-208	ENST00000590388	HAUS3	Q68CZ6	603 aa		13.93	□□□□□ -0.18
TUBB6-208	ENST00000590388	RTN4RL1	Q86UN2	441 aa	Predicted RBP	13.93	□□□□□ -0.18
TUBB6-208	ENST00000590388	ZBED2	Q9BTP6	218 aa		13.93	□□□□□ -0.18
TUBB6-208	ENST00000590388	RAB34	Q9BZG1	259 aa		13.93	□□□□□ -0.18
TUBB6-208	ENST00000590388	RC3H2	Q9HBD1	1191 aa	Known RBP	13.93	□□□□□ -0.18
TUBB6-208	ENST00000590388	SUCLA2	Q9P2R7	463 aa	Predicted RBP	13.93	□□□□□ -0.18
TUBB6-208	ENST00000590388	ST3GAL5	Q9UNP4	418 aa		13.93	□□□□□ -0.18
TUBB6-208	ENST00000590388	STK24	Q9Y6E0	443 aa		13.93	□□□□□ -0.18
TUBB6-208	ENST00000590388	COL4A4	P53420	1690 aa	Predicted RBP	13.93	□□□□□ -0.18
TUBB6-208	ENST00000590388	LCHN	A4D1U4	455 aa		13.92	□□□□□ -0.18
TUBB6-208	ENST00000590388	MED24	O75448	989 aa		13.92	□□□□□ -0.18
TUBB6-208	ENST00000590388	DGAT1	O75907	488 aa		13.92	□□□□□ -0.18
TUBB6-208	ENST00000590388	ARHGEF15	O94989	841 aa		13.92	□□□□□ -0.18
TUBB6-208	ENST00000590388	SYT1	P21579	422 aa		13.92	□□□□□ -0.18
TUBB6-208	ENST00000590388	DSC3	Q14574	896 aa		13.92	□□□□□ -0.18
TUBB6-208	ENST00000590388	EMC2	Q15006	297 aa		13.92	□□□□□ -0.18
TUBB6-208	ENST00000590388	ARL6IP4	Q66PJ3	421 aa	Known RBP	13.92	□□□□□ -0.18
TUBB6-208	ENST00000590388	PSPC1	Q8WXF1	523 aa	Known RBP	13.92	□□□□□ -0.18
TUBB6-208	ENST00000590388	PPP1R16B	Q96T49	567 aa		13.92	□□□□□ -0.18
TUBB6-208	ENST00000590388	XPNPEP1	Q9NQW7	623 aa		13.92	□□□□□ -0.18
TUBB6-208	ENST00000590388	DBR1	Q9UK59	544 aa	Known RBP	13.92	□□□□□ -0.18
TUBB6-208	ENST00000590388	EYS	Q5T1H1	3165 aa		13.92	□□□□□ -0.18
TUBB6-208	ENST00000590388	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	13.91	□□□□□ -0.18
TUBB6-208	ENST00000590388	LINC01553	A4QN01	128 aa		13.91	□□□□□ -0.18
TUBB6-208	ENST00000590388	VPS37C	A5D8V6	355 aa	Predicted RBP	13.91	□□□□□ -0.18
TUBB6-208	ENST00000590388	MGEA5	O60502	916 aa		13.91	□□□□□ -0.18
TUBB6-208	ENST00000590388	BMP15	O95972	392 aa		13.91	□□□□□ -0.18
TUBB6-208	ENST00000590388	NFX1	Q12986	1120 aa	Known RBP	13.91	□□□□□ -0.18
TUBB6-208	ENST00000590388	IL17A	Q16552	155 aa		13.91	□□□□□ -0.18
TUBB6-208	ENST00000590388	POTEG	Q6S5H5	508 aa		13.91	□□□□□ -0.18
TUBB6-208	ENST00000590388	DTHD1	Q6ZMT9	781 aa		13.91	□□□□□ -0.18
TUBB6-208	ENST00000590388	HSCB	Q8IWL3	235 aa		13.91	□□□□□ -0.18
TUBB6-208	ENST00000590388	PIGO	Q8TEQ8	1089 aa		13.91	□□□□□ -0.18
TUBB6-208	ENST00000590388	TCP11	Q8WWU5	503 aa		13.91	□□□□□ -0.18
TUBB6-208	ENST00000590388	NLRP7	Q8WX94	980 aa		13.91	□□□□□ -0.18
TUBB6-208	ENST00000590388	NACC1	Q96RE7	527 aa		13.91	□□□□□ -0.18
TUBB6-208	ENST00000590388	MTR	Q99707	1265 aa		13.91	□□□□□ -0.18
TUBB6-208	ENST00000590388	GCOM2	Q9BZD3	368 aa	Predicted RBP	13.91	□□□□□ -0.18
TUBB6-208	ENST00000590388	RGS18	Q9NS28	235 aa		13.91	□□□□□ -0.18
TUBB6-208	ENST00000590388	C1orf112	Q9NSG2	853 aa		13.91	□□□□□ -0.18
TUBB6-208	ENST00000590388	LRWD1	Q9UFC0	647 aa		13.91	□□□□□ -0.18
TUBB6-208	ENST00000590388	COL4A3BP	Q9Y5P4	624 aa		13.91	□□□□□ -0.18
TUBB6-208	ENST00000590388	KIAA1671	Q9BY89	1806 aa		13.91	□□□□□ -0.18
TUBB6-208	ENST00000590388		A0A087WZ62	844 aa		13.9	□□□□□ -0.18
TUBB6-208	ENST00000590388		C9IYK1	514 aa		13.9	□□□□□ -0.18
TUBB6-208	ENST00000590388	ASAP2	O43150	1006 aa		13.9	□□□□□ -0.18
TUBB6-208	ENST00000590388	SARS	P49591	514 aa	Known RBP	13.9	□□□□□ -0.18
TUBB6-208	ENST00000590388	ERVK-21	P61565	698 aa		13.9	□□□□□ -0.18
TUBB6-208	ENST00000590388	POU5F1B	Q06416	359 aa		13.9	□□□□□ -0.18
TUBB6-208	ENST00000590388	REST	Q13127	1097 aa		13.9	□□□□□ -0.18
TUBB6-208	ENST00000590388	FAM117B	Q6P1L5	589 aa		13.9	□□□□□ -0.18
TUBB6-208	ENST00000590388	SLC24A5	Q71RS6	500 aa		13.9	□□□□□ -0.18
TUBB6-208	ENST00000590388	FERMT3	Q86UX7	667 aa		13.9	□□□□□ -0.18
TUBB6-208	ENST00000590388	RHPN2	Q8IUC4	686 aa		13.9	□□□□□ -0.18
TUBB6-208	ENST00000590388	NPAS4	Q8IUM7	802 aa		13.9	□□□□□ -0.18
TUBB6-208	ENST00000590388	PRPF31	Q8WWY3	499 aa	Known RBP	13.9	□□□□□ -0.18
TUBB6-208	ENST00000590388	MYLIP	Q8WY64	445 aa		13.9	□□□□□ -0.18
TUBB6-208	ENST00000590388	ZNF689	Q96CS4	500 aa	Predicted RBP	13.9	□□□□□ -0.18
TUBB6-208	ENST00000590388	YME1L1	Q96TA2	773 aa		13.9	□□□□□ -0.18
TUBB6-208	ENST00000590388	FDXACB1	Q9BRP7	624 aa	Predicted RBP	13.9	□□□□□ -0.18
TUBB6-208	ENST00000590388	INO80B	Q9C086	356 aa	Predicted RBP	13.9	□□□□□ -0.18
TUBB6-208	ENST00000590388	ATP6V0A4	Q9HBG4	840 aa		13.9	□□□□□ -0.18
TUBB6-208	ENST00000590388	IFT122	Q9HBG6	1241 aa		13.9	□□□□□ -0.18
TUBB6-208	ENST00000590388	RNF216	Q9NWF9	866 aa	Predicted RBP	13.9	□□□□□ -0.18
TUBB6-208	ENST00000590388	MTMR6	Q9Y217	621 aa		13.9	□□□□□ -0.18
TUBB6-208	ENST00000590388	ADGRA3	Q8IWK6	1321 aa		13.9	□□□□□ -0.19
TUBB6-208	ENST00000590388	DENND3	A2RUS2	1198 aa		13.89	□□□□□ -0.19
TUBB6-208	ENST00000590388	DGKI	O75912	1065 aa		13.89	□□□□□ -0.19
TUBB6-208	ENST00000590388	UPP2	O95045	317 aa		13.89	□□□□□ -0.19
TUBB6-208	ENST00000590388	CCT6A	P40227	531 aa	Known RBP	13.89	□□□□□ -0.19
TUBB6-208	ENST00000590388	FAM189B	P81408	668 aa		13.89	□□□□□ -0.19
TUBB6-208	ENST00000590388	LAMTOR4	Q0VGL1	99 aa		13.89	□□□□□ -0.19
TUBB6-208	ENST00000590388	MXD4	Q14582	209 aa	Predicted RBP	13.89	□□□□□ -0.19
TUBB6-208	ENST00000590388	ECM1	Q16610	540 aa		13.89	□□□□□ -0.19
TUBB6-208	ENST00000590388	IFNLR1	Q8IU57	520 aa	Predicted RBP	13.89	□□□□□ -0.19
TUBB6-208	ENST00000590388	KSR1	Q8IVT5	923 aa		13.89	□□□□□ -0.19
TUBB6-208	ENST00000590388	KCTD17	Q8N5Z5	321 aa		13.89	□□□□□ -0.19
TUBB6-208	ENST00000590388	SNX29	Q8TEQ0	813 aa		13.89	□□□□□ -0.19
TUBB6-208	ENST00000590388	TMEM143	Q96AN5	459 aa		13.89	□□□□□ -0.19
TUBB6-208	ENST00000590388	ZNF668	Q96K58	619 aa	Predicted RBP	13.89	□□□□□ -0.19
TUBB6-208	ENST00000590388	NLRP4	Q96MN2	994 aa		13.89	□□□□□ -0.19
TUBB6-208	ENST00000590388	CCDC43	Q96MW1	224 aa	Known RBP	13.89	□□□□□ -0.19
TUBB6-208	ENST00000590388	SCLT1	Q96NL6	688 aa		13.89	□□□□□ -0.19
TUBB6-208	ENST00000590388	TGS1	Q96RS0	853 aa	Known RBP	13.89	□□□□□ -0.19
TUBB6-208	ENST00000590388	ADAM2	Q99965	735 aa		13.89	□□□□□ -0.19
TUBB6-208	ENST00000590388	TRAIP	Q9BWF2	469 aa		13.89	□□□□□ -0.19
TUBB6-208	ENST00000590388	PRDM12	Q9H4Q4	367 aa		13.89	□□□□□ -0.19
TUBB6-208	ENST00000590388	ELAC1	Q9H777	363 aa	Known RBP	13.89	□□□□□ -0.19
TUBB6-208	ENST00000590388	STX6	O43752	255 aa		13.88	□□□□□ -0.19
TUBB6-208	ENST00000590388	STAG3L1	P0CL83	205 aa		13.88	□□□□□ -0.19
TUBB6-208	ENST00000590388	PDIA4	P13667	645 aa	Known RBP	13.88	□□□□□ -0.19
TUBB6-208	ENST00000590388	FOSL2	P15408	326 aa		13.88	□□□□□ -0.19
TUBB6-208	ENST00000590388	POU3F3	P20264	500 aa	Predicted RBP	13.88	□□□□□ -0.19
TUBB6-208	ENST00000590388	SFPQ	P23246	707 aa	Known RBP eCLIP	13.88	□□□□□ -0.19
TUBB6-208	ENST00000590388	ARL2	P36404	184 aa		13.88	□□□□□ -0.19
TUBB6-208	ENST00000590388	ADGRE1	Q14246	886 aa		13.88	□□□□□ -0.19
TUBB6-208	ENST00000590388	PCBP1	Q15365	356 aa	Known RBP eCLIP	13.88	□□□□□ -0.19
TUBB6-208	ENST00000590388	HYI	Q5T013	277 aa		13.88	□□□□□ -0.19
TUBB6-208	ENST00000590388	KRT79	Q5XKE5	535 aa		13.88	□□□□□ -0.19

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