RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-208ENST00000590301 NLRP11P59045 1033 aaKnown RBP8.54□□□□□ -1.04
NPC1-208ENST00000590301 PSMC5P62195 406 aa8.54□□□□□ -1.04
NPC1-208ENST00000590301 PPP2R5CQ13362 524 aa8.54□□□□□ -1.04
NPC1-208ENST00000590301 DSC3Q14574 896 aa8.54□□□□□ -1.04
NPC1-208ENST00000590301 UGCGQ16739 394 aa8.54□□□□□ -1.04
NPC1-208ENST00000590301 INF2Q27J81 1249 aa8.54□□□□□ -1.04
NPC1-208ENST00000590301 CTC1Q2NKJ3 1217 aa8.54□□□□□ -1.04
NPC1-208ENST00000590301 LETM2Q2VYF4 491 aa8.54□□□□□ -1.04
NPC1-208ENST00000590301 PTCRAQ6ISU1 281 aaPredicted RBP8.54□□□□□ -1.04
NPC1-208ENST00000590301 PDE12Q6L8Q7 609 aaKnown RBP8.54□□□□□ -1.04
NPC1-208ENST00000590301 ZNF410Q86VK4 478 aa8.54□□□□□ -1.04
NPC1-208ENST00000590301 FAM228AQ86W67 206 aa8.54□□□□□ -1.04
NPC1-208ENST00000590301 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.54□□□□□ -1.04
NPC1-208ENST00000590301 SCLT1Q96NL6 688 aa8.54□□□□□ -1.04
NPC1-208ENST00000590301 NECAB3Q96P71 396 aaPredicted RBP8.54□□□□□ -1.04
NPC1-208ENST00000590301 UIMC1Q96RL1 719 aa8.54□□□□□ -1.04
NPC1-208ENST00000590301 INO80BQ9C086 356 aaPredicted RBP8.54□□□□□ -1.04
NPC1-208ENST00000590301 KCNMB3Q9NPA1 279 aa8.54□□□□□ -1.04
NPC1-208ENST00000590301 CHST12Q9NRB3 414 aa8.54□□□□□ -1.04
NPC1-208ENST00000590301 DACT1Q9NYF0 836 aa8.54□□□□□ -1.04
NPC1-208ENST00000590301 PRKAG3Q9UGI9 489 aa8.54□□□□□ -1.04
NPC1-208ENST00000590301 TPCN1Q9ULQ1 816 aa8.54□□□□□ -1.04
NPC1-208ENST00000590301 TET1Q8NFU7 2136 aa8.54□□□□□ -1.04
NPC1-208ENST00000590301 MUC3AQ02505 3323 aa8.54□□□□□ -1.04
NPC1-208ENST00000590301 IGKV6-21A0A0C4DH24 114 aa8.53□□□□□ -1.04
NPC1-208ENST00000590301 GAS2O43903 313 aaKnown RBP8.53□□□□□ -1.04
NPC1-208ENST00000590301 MAFO75444 373 aaPredicted RBP8.53□□□□□ -1.04
NPC1-208ENST00000590301 EOMESO95936 686 aa8.53□□□□□ -1.04
NPC1-208ENST00000590301 ITGB1P05556 798 aa8.53□□□□□ -1.04
NPC1-208ENST00000590301 SKIP12755 728 aa8.53□□□□□ -1.04
NPC1-208ENST00000590301 LAG3P18627 525 aa8.53□□□□□ -1.04
NPC1-208ENST00000590301 SFPQP23246 707 aaKnown RBP eCLIP8.53□□□□□ -1.04
NPC1-208ENST00000590301 PPM1AP35813 382 aa8.53□□□□□ -1.04
NPC1-208ENST00000590301 QARSP47897 775 aaKnown RBP8.53□□□□□ -1.04
NPC1-208ENST00000590301 GPC3P51654 580 aa8.53□□□□□ -1.04
NPC1-208ENST00000590301 CLCN6P51797 869 aa8.53□□□□□ -1.04
NPC1-208ENST00000590301 AK2P54819 239 aa8.53□□□□□ -1.04
NPC1-208ENST00000590301 HYAL1Q12794 435 aa8.53□□□□□ -1.04
NPC1-208ENST00000590301 PAN2Q504Q3 1202 aaKnown RBP8.53□□□□□ -1.04
NPC1-208ENST00000590301 TRMT1LQ7Z2T5 733 aaKnown RBP8.53□□□□□ -1.04
NPC1-208ENST00000590301 FAM178BQ8IXR5 827 aa8.53□□□□□ -1.04
NPC1-208ENST00000590301 SLFN12Q8IYM2 578 aa8.53□□□□□ -1.04
NPC1-208ENST00000590301 ABI1Q8IZP0 508 aa8.53□□□□□ -1.04
NPC1-208ENST00000590301 LRRC71Q8N4P6 559 aa8.53□□□□□ -1.04
NPC1-208ENST00000590301 KLHL23Q8NBE8 558 aa8.53□□□□□ -1.04
NPC1-208ENST00000590301 SPPL3Q8TCT6 385 aa8.53□□□□□ -1.04
NPC1-208ENST00000590301 NLRP7Q8WX94 980 aa8.53□□□□□ -1.04
NPC1-208ENST00000590301 SLC7A3Q8WY07 619 aa8.53□□□□□ -1.04
NPC1-208ENST00000590301 GTF3C6Q969F1 213 aa8.53□□□□□ -1.04
NPC1-208ENST00000590301 AIFM3Q96NN9 605 aa8.53□□□□□ -1.04
NPC1-208ENST00000590301 POP1Q99575 1024 aaKnown RBP8.53□□□□□ -1.04
NPC1-208ENST00000590301 CDCA3Q99618 268 aaPredicted RBP8.53□□□□□ -1.04
NPC1-208ENST00000590301 LARP6Q9BRS8 491 aaKnown RBP8.53□□□□□ -1.04
NPC1-208ENST00000590301 TRAIPQ9BWF2 469 aa8.53□□□□□ -1.04
NPC1-208ENST00000590301 GCOM2Q9BZD3 368 aaPredicted RBP8.53□□□□□ -1.04
NPC1-208ENST00000590301 TMEM117Q9H0C3 514 aa8.53□□□□□ -1.04
NPC1-208ENST00000590301 ALG13Q9NP73 1137 aaKnown RBP8.53□□□□□ -1.04
NPC1-208ENST00000590301 CLDND1Q9NY35 253 aa8.53□□□□□ -1.04
NPC1-208ENST00000590301 ORC3Q9UBD5 711 aaPredicted RBP8.53□□□□□ -1.04
NPC1-208ENST00000590301 SEPT9Q9UHD8 586 aaPredicted RBP8.53□□□□□ -1.04
NPC1-208ENST00000590301 KCNJ14Q9UNX9 436 aa8.53□□□□□ -1.04
NPC1-208ENST00000590301 LZTS1Q9Y250 596 aa8.53□□□□□ -1.04
NPC1-208ENST00000590301 PRRC2BQ5JSZ5 2229 aaKnown RBP8.53□□□□□ -1.04
NPC1-208ENST00000590301 A0A0U1RQF3 1178 aa8.52□□□□□ -1.05
NPC1-208ENST00000590301 TBKBP1A7MCY6 615 aa8.52□□□□□ -1.05
NPC1-208ENST00000590301 DDX11L8A8MPP1 907 aa8.52□□□□□ -1.05
NPC1-208ENST00000590301 H3BQ06 376 aaPredicted RBP8.52□□□□□ -1.05
NPC1-208ENST00000590301 SLC37A4O43826 429 aa8.52□□□□□ -1.05
NPC1-208ENST00000590301 MARCH6O60337 910 aa8.52□□□□□ -1.05
NPC1-208ENST00000590301 CCNT1O60563 726 aaKnown RBP8.52□□□□□ -1.05
NPC1-208ENST00000590301 ZMYND10O75800 440 aa8.52□□□□□ -1.05
NPC1-208ENST00000590301 STBD1O95210 358 aa8.52□□□□□ -1.05
NPC1-208ENST00000590301 BAG4O95429 457 aaKnown RBP8.52□□□□□ -1.05
NPC1-208ENST00000590301 P4HBP07237 508 aaKnown RBP8.52□□□□□ -1.05
NPC1-208ENST00000590301 KRT2P35908 639 aa8.52□□□□□ -1.05
NPC1-208ENST00000590301 RFC5P40937 340 aa8.52□□□□□ -1.05
NPC1-208ENST00000590301 CAMK1Q14012 370 aa8.52□□□□□ -1.05
NPC1-208ENST00000590301 TRIM29Q14134 588 aa8.52□□□□□ -1.05
NPC1-208ENST00000590301 EPHA7Q15375 998 aa8.52□□□□□ -1.05
NPC1-208ENST00000590301 MTERF2Q49AM1 385 aa8.52□□□□□ -1.05
NPC1-208ENST00000590301 SPOUT1Q5T280 376 aaKnown RBP8.52□□□□□ -1.05
NPC1-208ENST00000590301 ANO5Q75V66 913 aa8.52□□□□□ -1.05
NPC1-208ENST00000590301 OTUD6AQ7L8S5 288 aa8.52□□□□□ -1.05
NPC1-208ENST00000590301 ECHDC2Q86YB7 292 aa8.52□□□□□ -1.05
NPC1-208ENST00000590301 GJD3Q8N144 294 aa8.52□□□□□ -1.05
NPC1-208ENST00000590301 LRRC43Q8N309 656 aa8.52□□□□□ -1.05
NPC1-208ENST00000590301 EFHBQ8N7U6 833 aa8.52□□□□□ -1.05
NPC1-208ENST00000590301 POF1BQ8WVV4 589 aa8.52□□□□□ -1.05
NPC1-208ENST00000590301 DCBLD2Q96PD2 775 aa8.52□□□□□ -1.05
NPC1-208ENST00000590301 CEP89Q96ST8 783 aa8.52□□□□□ -1.05
NPC1-208ENST00000590301 MRPL9Q9BYD2 267 aaKnown RBP8.52□□□□□ -1.05
NPC1-208ENST00000590301 SUCLA2Q9P2R7 463 aaPredicted RBP8.52□□□□□ -1.05
NPC1-208ENST00000590301 PUF60Q9UHX1 559 aaKnown RBP8.52□□□□□ -1.05
NPC1-208ENST00000590301 VAV3Q9UKW4 847 aa8.52□□□□□ -1.05
NPC1-208ENST00000590301 NCOR1O75376 2440 aa8.51□□□□□ -1.05
NPC1-208ENST00000590301 FGF18O76093 207 aa8.51□□□□□ -1.05
NPC1-208ENST00000590301 CTDNEP1O95476 244 aa8.51□□□□□ -1.05
NPC1-208ENST00000590301 CENPBP07199 599 aaPredicted RBP8.51□□□□□ -1.05
NPC1-208ENST00000590301 SRGAP2BP0DMP2 458 aa8.51□□□□□ -1.05
NPC1-208ENST00000590301 FGFR1P11362 822 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms