RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 RBM10P98175 930 aaKnown RBP20.29■□□□□ 0.84
H3F3B-209ENST00000589949 NONOQ15233 471 aaKnown RBP eCLIP20.29■□□□□ 0.844e-7■□□□□ 9.8
H3F3B-209ENST00000589949 MTERF2Q49AM1 385 aa20.29■□□□□ 0.84
H3F3B-209ENST00000589949 EARS2Q5JPH6 523 aaKnown RBP20.29■□□□□ 0.84
H3F3B-209ENST00000589949 ODR4Q5SWX8 454 aa20.29■□□□□ 0.84
H3F3B-209ENST00000589949 MSLNLQ96KJ4 702 aa20.29■□□□□ 0.84
H3F3B-209ENST00000589949 CASD1Q96PB1 797 aa20.29■□□□□ 0.84
H3F3B-209ENST00000589949 MAP7D2Q96T17 732 aa20.29■□□□□ 0.84
H3F3B-209ENST00000589949 C22orf23Q9BZE7 217 aa20.29■□□□□ 0.84
H3F3B-209ENST00000589949 ELAC1Q9H777 363 aaKnown RBP20.29■□□□□ 0.84
H3F3B-209ENST00000589949 ATP6V0A4Q9HBG4 840 aa20.29■□□□□ 0.84
H3F3B-209ENST00000589949 IGKV6-21A0A0C4DH24 114 aa20.28■□□□□ 0.84
H3F3B-209ENST00000589949 C19orf67A6NJJ6 358 aa20.28■□□□□ 0.84
H3F3B-209ENST00000589949 PFKFB2O60825 505 aa20.28■□□□□ 0.84
H3F3B-209ENST00000589949 GLP2RO95838 553 aa20.28■□□□□ 0.84
H3F3B-209ENST00000589949 TMOD1P28289 359 aa20.28■□□□□ 0.84
H3F3B-209ENST00000589949 NRIP1P48552 1158 aa20.28■□□□□ 0.84
H3F3B-209ENST00000589949 ERVFC1P60507 584 aa20.28■□□□□ 0.84
H3F3B-209ENST00000589949 TBC1D8BQ0IIM8 1120 aa20.28■□□□□ 0.84
H3F3B-209ENST00000589949 TMEM31Q5JXX7 168 aa20.28■□□□□ 0.84
H3F3B-209ENST00000589949 GALNT17Q6IS24 598 aa20.28■□□□□ 0.84
H3F3B-209ENST00000589949 MOXD1Q6UVY6 613 aa20.28■□□□□ 0.84
H3F3B-209ENST00000589949 FAM43BQ6ZT52 329 aaPredicted RBP20.28■□□□□ 0.84
H3F3B-209ENST00000589949 RBM23Q86U06 439 aaKnown RBP20.28■□□□□ 0.84
H3F3B-209ENST00000589949 COLGALT1Q8NBJ5 622 aa20.28■□□□□ 0.84
H3F3B-209ENST00000589949 RDM1Q8NG50 284 aa20.28■□□□□ 0.84
H3F3B-209ENST00000589949 SEPT9Q9UHD8 586 aaPredicted RBP20.28■□□□□ 0.84
H3F3B-209ENST00000589949 DDX25Q9UHL0 483 aaKnown RBP20.28■□□□□ 0.84
H3F3B-209ENST00000589949 VAV3Q9UKW4 847 aa20.28■□□□□ 0.84
H3F3B-209ENST00000589949 FAM205CA6NFA0 338 aa20.27■□□□□ 0.84
H3F3B-209ENST00000589949 GPR37L1O60883 481 aa20.27■□□□□ 0.84
H3F3B-209ENST00000589949 FGF18O76093 207 aa20.27■□□□□ 0.84
H3F3B-209ENST00000589949 ATF7P17544 494 aaPredicted RBP20.27■□□□□ 0.84
H3F3B-209ENST00000589949 PBX3P40426 434 aa20.27■□□□□ 0.84
H3F3B-209ENST00000589949 SMAD2Q15796 467 aaKnown RBP20.27■□□□□ 0.84
H3F3B-209ENST00000589949 LETM2Q2VYF4 491 aa20.27■□□□□ 0.84
H3F3B-209ENST00000589949 XKR3Q5GH77 459 aa20.27■□□□□ 0.84
H3F3B-209ENST00000589949 CLLU1OSQ5K130 101 aa20.27■□□□□ 0.84
H3F3B-209ENST00000589949 ANO5Q75V66 913 aa20.27■□□□□ 0.84
H3F3B-209ENST00000589949 KRT25Q7Z3Z0 450 aa20.27■□□□□ 0.84
H3F3B-209ENST00000589949 ECHDC2Q86YB7 292 aa20.27■□□□□ 0.84
H3F3B-209ENST00000589949 FAM177A1Q8N128 213 aaPredicted RBP20.27■□□□□ 0.84
H3F3B-209ENST00000589949 ZNF579Q8NAF0 562 aaKnown RBP20.27■□□□□ 0.84
H3F3B-209ENST00000589949 VN1R2Q8NFZ6 395 aa20.27■□□□□ 0.84
H3F3B-209ENST00000589949 KCNMB3Q9NPA1 279 aa20.27■□□□□ 0.84
H3F3B-209ENST00000589949 WRAP73Q9P2S5 460 aaPredicted RBP20.27■□□□□ 0.84
H3F3B-209ENST00000589949 PCDHB12Q9Y5F1 795 aa20.27■□□□□ 0.84
H3F3B-209ENST00000589949 PER2O15055 1255 aa20.26■□□□□ 0.83
H3F3B-209ENST00000589949 LARGE1O95461 756 aa20.26■□□□□ 0.83
H3F3B-209ENST00000589949 FDPSP14324 419 aaKnown RBP20.26■□□□□ 0.83
H3F3B-209ENST00000589949 SPOUT1Q5T280 376 aaKnown RBP20.26■□□□□ 0.83
H3F3B-209ENST00000589949 PLA2G4FQ68DD2 849 aa20.26■□□□□ 0.83
H3F3B-209ENST00000589949 CPLX2Q6PUV4 134 aaKnown RBP20.26■□□□□ 0.83
H3F3B-209ENST00000589949 ZNF598Q86UK7 904 aaKnown RBP20.26■□□□□ 0.83
H3F3B-209ENST00000589949 ADHFE1Q8IWW8 467 aa20.26■□□□□ 0.83
H3F3B-209ENST00000589949 EFHBQ8N7U6 833 aa20.26■□□□□ 0.83
H3F3B-209ENST00000589949 HAS1Q92839 578 aa20.26■□□□□ 0.83
H3F3B-209ENST00000589949 TMEM117Q9H0C3 514 aa20.26■□□□□ 0.83
H3F3B-209ENST00000589949 SLKQ9H2G2 1235 aaPredicted RBP20.26■□□□□ 0.83
H3F3B-209ENST00000589949 TRIOO75962 3097 aa20.26■□□□□ 0.83
H3F3B-209ENST00000589949 STK36Q9NRP7 1315 aa20.26■□□□□ 0.83
H3F3B-209ENST00000589949 DDX11L8A8MPP1 907 aa20.25■□□□□ 0.83
H3F3B-209ENST00000589949 AK2P54819 239 aa20.25■□□□□ 0.83
H3F3B-209ENST00000589949 KSR1Q8IVT5 923 aa20.25■□□□□ 0.83
H3F3B-209ENST00000589949 NECAB1Q8N987 351 aa20.25■□□□□ 0.83
H3F3B-209ENST00000589949 NLRP7Q8WX94 980 aa20.25■□□□□ 0.83
H3F3B-209ENST00000589949 PRKAG3Q9UGI9 489 aa20.25■□□□□ 0.83
H3F3B-209ENST00000589949 CD207Q9UJ71 328 aa20.25■□□□□ 0.83
H3F3B-209ENST00000589949 BARX2Q9UMQ3 279 aaPredicted RBP20.25■□□□□ 0.83
H3F3B-209ENST00000589949 A0A087WZ62 844 aa20.24■□□□□ 0.83
H3F3B-209ENST00000589949 FSCN2O14926 492 aa20.24■□□□□ 0.83
H3F3B-209ENST00000589949 MAFO75444 373 aaPredicted RBP20.24■□□□□ 0.83
H3F3B-209ENST00000589949 EYA4O95677 639 aa20.24■□□□□ 0.83
H3F3B-209ENST00000589949 NDUFV1P49821 464 aa20.24■□□□□ 0.83
H3F3B-209ENST00000589949 NPEPPSP55786 919 aa20.24■□□□□ 0.83
H3F3B-209ENST00000589949 PPP2R5CQ13362 524 aa20.24■□□□□ 0.83
H3F3B-209ENST00000589949 SMAD4Q13485 552 aaKnown RBP20.24■□□□□ 0.83
H3F3B-209ENST00000589949 PIK3AP1Q6ZUJ8 805 aa20.24■□□□□ 0.83
H3F3B-209ENST00000589949 NEK8Q86SG6 692 aa20.24■□□□□ 0.83
H3F3B-209ENST00000589949 THNSL1Q8IYQ7 743 aa20.24■□□□□ 0.83
H3F3B-209ENST00000589949 RNF169Q8NCN4 708 aa20.24■□□□□ 0.83
H3F3B-209ENST00000589949 FDXACB1Q9BRP7 624 aaPredicted RBP20.24■□□□□ 0.83
H3F3B-209ENST00000589949 TLR9Q9NR96 1032 aa20.24■□□□□ 0.83
H3F3B-209ENST00000589949 GTF3C3Q9Y5Q9 886 aa20.24■□□□□ 0.83
H3F3B-209ENST00000589949 A0A0U1RQF3 1178 aa20.23■□□□□ 0.83
H3F3B-209ENST00000589949 CCDC194A0A1B0GVG4 234 aa20.23■□□□□ 0.83
H3F3B-209ENST00000589949 ZSCAN20P17040 1043 aaPredicted RBP20.23■□□□□ 0.83
H3F3B-209ENST00000589949 PSMC5P62195 406 aa20.23■□□□□ 0.83
H3F3B-209ENST00000589949 UBE3AQ05086 875 aa20.23■□□□□ 0.83
H3F3B-209ENST00000589949 NR5A1Q13285 461 aa20.23■□□□□ 0.83
H3F3B-209ENST00000589949 PPP4R3AQ6IN85 833 aa20.23■□□□□ 0.83
H3F3B-209ENST00000589949 ZNF710Q8N1W2 664 aa20.23■□□□□ 0.83
H3F3B-209ENST00000589949 SMRP1Q8NCR6 262 aa20.23■□□□□ 0.83
H3F3B-209ENST00000589949 MICAL1Q8TDZ2 1067 aa20.23■□□□□ 0.83
H3F3B-209ENST00000589949 TNFRSF25Q93038 417 aa20.23■□□□□ 0.83
H3F3B-209ENST00000589949 SCLT1Q96NL6 688 aa20.23■□□□□ 0.83
H3F3B-209ENST00000589949 TLE6Q9H808 572 aa20.23■□□□□ 0.83
H3F3B-209ENST00000589949 AAASQ9NRG9 546 aa20.23■□□□□ 0.83
H3F3B-209ENST00000589949 RNF216Q9NWF9 866 aaPredicted RBP20.23■□□□□ 0.83
H3F3B-209ENST00000589949 SUCLA2Q9P2R7 463 aaPredicted RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms