RNA–Protein interactions for RNA: ENST00000589158.1

CLPTM1-210, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 749 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-210ENST00000589158 STAG3L1P0CL83 205 aa15.73■□□□□ 0.11
CLPTM1-210ENST00000589158 SPATA31C1P0DKV0 1188 aa15.73■□□□□ 0.11
CLPTM1-210ENST00000589158 FXR2P51116 673 aaKnown RBP eCLIP15.73■□□□□ 0.11
CLPTM1-210ENST00000589158 EMC2Q15006 297 aa15.73■□□□□ 0.11
CLPTM1-210ENST00000589158 SPRED2Q7Z698 418 aa15.73■□□□□ 0.11
CLPTM1-210ENST00000589158 KSR1Q8IVT5 923 aa15.73■□□□□ 0.11
CLPTM1-210ENST00000589158 MAFAQ8NHW3 353 aaPredicted RBP15.73■□□□□ 0.11
CLPTM1-210ENST00000589158 PRPF31Q8WWY3 499 aaKnown RBP15.73■□□□□ 0.11
CLPTM1-210ENST00000589158 TGS1Q96RS0 853 aaKnown RBP15.73■□□□□ 0.11
CLPTM1-210ENST00000589158 FDXACB1Q9BRP7 624 aaPredicted RBP15.73■□□□□ 0.11
CLPTM1-210ENST00000589158 POLR3CQ9BUI4 534 aaPredicted RBP15.73■□□□□ 0.11
CLPTM1-210ENST00000589158 RAB34Q9BZG1 259 aa15.73■□□□□ 0.11
CLPTM1-210ENST00000589158 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.73■□□□□ 0.11
CLPTM1-210ENST00000589158 LRWD1Q9UFC0 647 aa15.73■□□□□ 0.11
CLPTM1-210ENST00000589158 LRFN2Q9ULH4 789 aa15.73■□□□□ 0.11
CLPTM1-210ENST00000589158 LAD1O00515 517 aa15.72■□□□□ 0.11
CLPTM1-210ENST00000589158 MGEA5O60502 916 aa15.72■□□□□ 0.11
CLPTM1-210ENST00000589158 CSDE1O75534 798 aaKnown RBP15.72■□□□□ 0.11
CLPTM1-210ENST00000589158 SRGAP2CP0DJJ0 459 aa15.72■□□□□ 0.11
CLPTM1-210ENST00000589158 ZSCAN20P17040 1043 aaPredicted RBP15.72■□□□□ 0.11
CLPTM1-210ENST00000589158 FGFR4P22455 802 aa15.72■□□□□ 0.11
CLPTM1-210ENST00000589158 CCT6AP40227 531 aaKnown RBP15.72■□□□□ 0.11
CLPTM1-210ENST00000589158 ADGRE1Q14246 886 aa15.72■□□□□ 0.11
CLPTM1-210ENST00000589158 HAUS3Q68CZ6 603 aa15.72■□□□□ 0.11
CLPTM1-210ENST00000589158 DTHD1Q6ZMT9 781 aa15.72■□□□□ 0.11
CLPTM1-210ENST00000589158 FAM43BQ6ZT52 329 aaPredicted RBP15.72■□□□□ 0.11
CLPTM1-210ENST00000589158 ZNF410Q86VK4 478 aa15.72■□□□□ 0.11
CLPTM1-210ENST00000589158 NPAS4Q8IUM7 802 aa15.72■□□□□ 0.11
CLPTM1-210ENST00000589158 SP7Q8TDD2 431 aaPredicted RBP15.72■□□□□ 0.11
CLPTM1-210ENST00000589158 TCP11Q8WWU5 503 aa15.72■□□□□ 0.11
CLPTM1-210ENST00000589158 PSPC1Q8WXF1 523 aaKnown RBP15.72■□□□□ 0.11
CLPTM1-210ENST00000589158 INTS4Q96HW7 963 aaKnown RBP15.72■□□□□ 0.11
CLPTM1-210ENST00000589158 NACC1Q96RE7 527 aa15.72■□□□□ 0.11
CLPTM1-210ENST00000589158 MTRQ99707 1265 aa15.72■□□□□ 0.11
CLPTM1-210ENST00000589158 RGS18Q9NS28 235 aa15.72■□□□□ 0.11
CLPTM1-210ENST00000589158 C1orf112Q9NSG2 853 aa15.72■□□□□ 0.11
CLPTM1-210ENST00000589158 COL4A3BPQ9Y5P4 624 aa15.72■□□□□ 0.11
CLPTM1-210ENST00000589158 EPOPA6NHQ4 379 aa15.71■□□□□ 0.11
CLPTM1-210ENST00000589158 GAS2O43903 313 aaKnown RBP15.71■□□□□ 0.11
CLPTM1-210ENST00000589158 XRCC6P12956 609 aaKnown RBP eCLIP15.71■□□□□ 0.11
CLPTM1-210ENST00000589158 RPA1P27694 616 aa15.71■□□□□ 0.11
CLPTM1-210ENST00000589158 SARSP49591 514 aaKnown RBP15.71■□□□□ 0.11
CLPTM1-210ENST00000589158 RARRES1P49788 294 aa15.71■□□□□ 0.11
CLPTM1-210ENST00000589158 ERVK-21P61565 698 aa15.71■□□□□ 0.11
CLPTM1-210ENST00000589158 PDIA5Q14554 519 aa15.71■□□□□ 0.11
CLPTM1-210ENST00000589158 POTEGQ6S5H5 508 aa15.71■□□□□ 0.11
CLPTM1-210ENST00000589158 SLC24A5Q71RS6 500 aa15.71■□□□□ 0.11
CLPTM1-210ENST00000589158 FERMT3Q86UX7 667 aa15.71■□□□□ 0.11
CLPTM1-210ENST00000589158 HSCBQ8IWL3 235 aa15.71■□□□□ 0.11
CLPTM1-210ENST00000589158 FIBCD1Q8N539 461 aa15.71■□□□□ 0.11
CLPTM1-210ENST00000589158 PPM1EQ8WY54 764 aa15.71■□□□□ 0.11
CLPTM1-210ENST00000589158 SNX21Q969T3 373 aa15.71■□□□□ 0.11
CLPTM1-210ENST00000589158 C17orf80Q9BSJ5 609 aa15.71■□□□□ 0.11
CLPTM1-210ENST00000589158 INO80BQ9C086 356 aaPredicted RBP15.71■□□□□ 0.11
CLPTM1-210ENST00000589158 ATP6V0A4Q9HBG4 840 aa15.71■□□□□ 0.11
CLPTM1-210ENST00000589158 PCDHB7Q9Y5E2 793 aa15.71■□□□□ 0.11
CLPTM1-210ENST00000589158 USO1O60763 962 aaKnown RBP15.7■□□□□ 0.1
CLPTM1-210ENST00000589158 DGAT1O75907 488 aa15.7■□□□□ 0.1
CLPTM1-210ENST00000589158 DGKIO75912 1065 aa15.7■□□□□ 0.1
CLPTM1-210ENST00000589158 SFPQP23246 707 aaKnown RBP eCLIP15.7■□□□□ 0.1
CLPTM1-210ENST00000589158 PRPHP41219 470 aa15.7■□□□□ 0.1
CLPTM1-210ENST00000589158 LAMTOR4Q0VGL1 99 aa15.7■□□□□ 0.1
CLPTM1-210ENST00000589158 BTG3Q14201 252 aaPredicted RBP15.7■□□□□ 0.1
CLPTM1-210ENST00000589158 DSC3Q14574 896 aa15.7■□□□□ 0.1
CLPTM1-210ENST00000589158 BRAPQ7Z569 592 aa15.7■□□□□ 0.1
CLPTM1-210ENST00000589158 IGSF22Q8N9C0 903 aa15.7■□□□□ 0.1
CLPTM1-210ENST00000589158 SNX29Q8TEQ0 813 aa15.7■□□□□ 0.1
CLPTM1-210ENST00000589158 XPNPEP1Q9NQW7 623 aa15.7■□□□□ 0.1
CLPTM1-210ENST00000589158 RNF216Q9NWF9 866 aaPredicted RBP15.7■□□□□ 0.1
CLPTM1-210ENST00000589158 STK24Q9Y6E0 443 aa15.7■□□□□ 0.1
CLPTM1-210ENST00000589158 SIP14410 1827 aa15.7■□□□□ 0.1
CLPTM1-210ENST00000589158 ADGRA3Q8IWK6 1321 aa15.69■□□□□ 0.1
CLPTM1-210ENST00000589158 MYH9P35579 1960 aaKnown RBP15.69■□□□□ 0.1
CLPTM1-210ENST00000589158 ARHGEF35A5YM69 484 aa15.69■□□□□ 0.1
CLPTM1-210ENST00000589158 C9IYK1 514 aa15.69■□□□□ 0.1
CLPTM1-210ENST00000589158 ASAP2O43150 1006 aa15.69■□□□□ 0.1
CLPTM1-210ENST00000589158 GTPBP6O43824 516 aaPredicted RBP15.69■□□□□ 0.1
CLPTM1-210ENST00000589158 SYT1P21579 422 aa15.69■□□□□ 0.1
CLPTM1-210ENST00000589158 ATP2C1P98194 919 aaPredicted RBP15.69■□□□□ 0.1
CLPTM1-210ENST00000589158 GRB10Q13322 594 aa15.69■□□□□ 0.1
CLPTM1-210ENST00000589158 CCDC85BQ15834 202 aaPredicted RBP15.69■□□□□ 0.1
CLPTM1-210ENST00000589158 IL17AQ16552 155 aa15.69■□□□□ 0.1
CLPTM1-210ENST00000589158 KRT79Q5XKE5 535 aa15.69■□□□□ 0.1
CLPTM1-210ENST00000589158 MAEAQ7L5Y9 396 aa15.69■□□□□ 0.1
CLPTM1-210ENST00000589158 CATSPER4Q7RTX7 472 aa15.69■□□□□ 0.1
CLPTM1-210ENST00000589158 MICALL1Q8N3F8 863 aa15.69■□□□□ 0.1
CLPTM1-210ENST00000589158 FBXO22Q8NEZ5 403 aa15.69■□□□□ 0.1
CLPTM1-210ENST00000589158 DBR1Q9UK59 544 aaKnown RBP15.69■□□□□ 0.1
CLPTM1-210ENST00000589158 KIAA1024Q9UPX6 916 aa15.69■□□□□ 0.1
CLPTM1-210ENST00000589158 VWA3AA6NCI4 1184 aa15.68■□□□□ 0.1
CLPTM1-210ENST00000589158 PP2D1A8MPX8 630 aa15.68■□□□□ 0.1
CLPTM1-210ENST00000589158 HSP90AA1P07900 732 aaKnown RBP15.68■□□□□ 0.1
CLPTM1-210ENST00000589158 MUTP22033 750 aa15.68■□□□□ 0.1
CLPTM1-210ENST00000589158 CDC25AP30304 524 aa15.68■□□□□ 0.1
CLPTM1-210ENST00000589158 GATMP50440 423 aa15.68■□□□□ 0.1
CLPTM1-210ENST00000589158 TFDP1Q14186 410 aa15.68■□□□□ 0.1
CLPTM1-210ENST00000589158 MXD4Q14582 209 aaPredicted RBP15.68■□□□□ 0.1
CLPTM1-210ENST00000589158 ECM1Q16610 540 aa15.68■□□□□ 0.1
CLPTM1-210ENST00000589158 PAN2Q504Q3 1202 aaKnown RBP15.68■□□□□ 0.1
CLPTM1-210ENST00000589158 EPC2Q52LR7 807 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms