RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 ADAMTS4O75173 837 aa16.09■□□□□ 0.17
CCDC43-203ENST00000588210 ICAM3P32942 547 aa16.09■□□□□ 0.17
CCDC43-203ENST00000588210 NKX3-2P78367 333 aa16.09■□□□□ 0.17
CCDC43-203ENST00000588210 ZBED6P86452 979 aa16.09■□□□□ 0.17
CCDC43-203ENST00000588210 PAPD7Q5XG87 772 aaKnown RBP16.09■□□□□ 0.17
CCDC43-203ENST00000588210 TLK2Q86UE8 772 aa16.09■□□□□ 0.17
CCDC43-203ENST00000588210 NLRX1Q86UT6 975 aa16.09■□□□□ 0.17
CCDC43-203ENST00000588210 CCDC170Q8IYT3 715 aa16.09■□□□□ 0.17
CCDC43-203ENST00000588210 NOA1Q8NC60 698 aaKnown RBP16.09■□□□□ 0.17
CCDC43-203ENST00000588210 ZFP91Q96JP5 570 aaPredicted RBP16.09■□□□□ 0.17
CCDC43-203ENST00000588210 CNOT6LQ96LI5 555 aaKnown RBP16.09■□□□□ 0.17
CCDC43-203ENST00000588210 UPF3AQ9H1J1 476 aaKnown RBP16.09■□□□□ 0.17
CCDC43-203ENST00000588210 DNM1LO00429 736 aa16.09■□□□□ 0.17
CCDC43-203ENST00000588210 MAFGO15525 162 aa16.09■□□□□ 0.17
CCDC43-203ENST00000588210 ARIH2O95376 493 aa16.09■□□□□ 0.17
CCDC43-203ENST00000588210 PGK1P00558 417 aa16.09■□□□□ 0.17
CCDC43-203ENST00000588210 ARHGAP4P98171 946 aa16.09■□□□□ 0.17
CCDC43-203ENST00000588210 LRRC41Q15345 812 aa16.09■□□□□ 0.17
CCDC43-203ENST00000588210 CCDC122Q5T0U0 273 aa16.09■□□□□ 0.17
CCDC43-203ENST00000588210 NCAPH2Q6IBW4 605 aa16.09■□□□□ 0.17
CCDC43-203ENST00000588210 NEK8Q86SG6 692 aa16.09■□□□□ 0.17
CCDC43-203ENST00000588210 CRYGNQ8WXF5 182 aa16.09■□□□□ 0.17
CCDC43-203ENST00000588210 IQCDQ96DY2 449 aa16.09■□□□□ 0.17
CCDC43-203ENST00000588210 AP5M1Q9H0R1 490 aa16.09■□□□□ 0.17
CCDC43-203ENST00000588210 UBIAD1Q9Y5Z9 338 aa16.09■□□□□ 0.17
CCDC43-203ENST00000588210 A0A1W2PQJ5 194 aa16.08■□□□□ 0.16
CCDC43-203ENST00000588210 EIF3CLB5ME19 914 aaKnown RBP16.08■□□□□ 0.16
CCDC43-203ENST00000588210 DYNC1LI2O43237 492 aaPredicted RBP16.08■□□□□ 0.16
CCDC43-203ENST00000588210 CCNT1O60563 726 aaKnown RBP16.08■□□□□ 0.16
CCDC43-203ENST00000588210 CYP3A4P08684 503 aa16.08■□□□□ 0.16
CCDC43-203ENST00000588210 CST5P28325 142 aaPredicted RBP16.08■□□□□ 0.16
CCDC43-203ENST00000588210 ASIC1P78348 528 aa16.08■□□□□ 0.16
CCDC43-203ENST00000588210 CDK17Q00537 523 aa16.08■□□□□ 0.16
CCDC43-203ENST00000588210 AMPD3Q01432 767 aa16.08■□□□□ 0.16
CCDC43-203ENST00000588210 LETM2Q2VYF4 491 aa16.08■□□□□ 0.16
CCDC43-203ENST00000588210 TMEM63BQ5T3F8 832 aa16.08■□□□□ 0.16
CCDC43-203ENST00000588210 ANKRD40Q6AI12 368 aa16.08■□□□□ 0.16
CCDC43-203ENST00000588210 NEK11Q8NG66 645 aa16.08■□□□□ 0.16
CCDC43-203ENST00000588210 JAKMIP2Q96AA8 810 aa16.08■□□□□ 0.16
CCDC43-203ENST00000588210 GPRASP2Q96D09 838 aa16.08■□□□□ 0.16
CCDC43-203ENST00000588210 CDHR1Q96JP9 859 aa16.08■□□□□ 0.16
CCDC43-203ENST00000588210 ERGIC2Q96RQ1 377 aa16.08■□□□□ 0.16
CCDC43-203ENST00000588210 EIF3CQ99613 913 aaKnown RBP16.08■□□□□ 0.16
CCDC43-203ENST00000588210 PDE11AQ9HCR9 933 aa16.08■□□□□ 0.16
CCDC43-203ENST00000588210 ZNHIT6Q9NWK9 470 aaKnown RBP16.08■□□□□ 0.16
CCDC43-203ENST00000588210 SPATA31C2B4DYI2 1134 aa16.07■□□□□ 0.16
CCDC43-203ENST00000588210 KBTBD13C9JR72 458 aa16.07■□□□□ 0.16
CCDC43-203ENST00000588210 KRT86O43790 486 aa16.07■□□□□ 0.16
CCDC43-203ENST00000588210 FARP2O94887 1054 aaPredicted RBP16.07■□□□□ 0.16
CCDC43-203ENST00000588210 C6orf222P0C671 652 aaPredicted RBP16.07■□□□□ 0.16
CCDC43-203ENST00000588210 TRIM21P19474 475 aaKnown RBP16.07■□□□□ 0.16
CCDC43-203ENST00000588210 RGS19P49795 217 aa16.07■□□□□ 0.16
CCDC43-203ENST00000588210 MNX1P50219 401 aaPredicted RBP16.07■□□□□ 0.16
CCDC43-203ENST00000588210 STK4Q13043 487 aa16.07■□□□□ 0.16
CCDC43-203ENST00000588210 LY6KQ17RY6 165 aa16.07■□□□□ 0.16
CCDC43-203ENST00000588210 MIIPQ5JXC2 388 aa16.07■□□□□ 0.16
CCDC43-203ENST00000588210 GJC2Q5T442 439 aaPredicted RBP16.07■□□□□ 0.16
CCDC43-203ENST00000588210 CNNM4Q6P4Q7 775 aa16.07■□□□□ 0.16
CCDC43-203ENST00000588210 KIAA1328Q86T90 577 aa16.07■□□□□ 0.16
CCDC43-203ENST00000588210 KLHDC9Q8NEP7 349 aa16.07■□□□□ 0.16
CCDC43-203ENST00000588210 RPGRIP1Q96KN7 1286 aa16.07■□□□□ 0.16
CCDC43-203ENST00000588210 MXRA8Q9BRK3 442 aa16.07■□□□□ 0.16
CCDC43-203ENST00000588210 JADE2Q9NQC1 790 aa16.07■□□□□ 0.16
CCDC43-203ENST00000588210 SAR1BQ9Y6B6 198 aa16.07■□□□□ 0.16
CCDC43-203ENST00000588210 MYH7BA7E2Y1 1941 aa16.07■□□□□ 0.16
CCDC43-203ENST00000588210 ATP1A1P05023 1023 aaKnown RBP16.07■□□□□ 0.16
CCDC43-203ENST00000588210 ITGB5P18084 799 aa16.07■□□□□ 0.16
CCDC43-203ENST00000588210 CKAP4Q07065 602 aaKnown RBP16.07■□□□□ 0.16
CCDC43-203ENST00000588210 TBC1D8BQ0IIM8 1120 aa16.07■□□□□ 0.16
CCDC43-203ENST00000588210 MCM6Q14566 821 aa16.07■□□□□ 0.16
CCDC43-203ENST00000588210 CASP8Q14790 479 aa16.07■□□□□ 0.16
CCDC43-203ENST00000588210 CEP55Q53EZ4 464 aa16.07■□□□□ 0.16
CCDC43-203ENST00000588210 UBE2Q1Q7Z7E8 422 aa16.07■□□□□ 0.16
CCDC43-203ENST00000588210 TSEN34Q9BSV6 310 aaKnown RBP16.07■□□□□ 0.16
CCDC43-203ENST00000588210 MMTAG2Q9BU76 263 aaKnown RBP16.07■□□□□ 0.16
CCDC43-203ENST00000588210 AGPAT5Q9NUQ2 364 aa16.07■□□□□ 0.16
CCDC43-203ENST00000588210 ANO9A1A5B4 782 aa16.06■□□□□ 0.16
CCDC43-203ENST00000588210 IPO7O95373 1038 aaKnown RBP16.06■□□□□ 0.16
CCDC43-203ENST00000588210 GH1P01241 217 aa16.06■□□□□ 0.16
CCDC43-203ENST00000588210 MYCNP04198 464 aaPredicted RBP16.06■□□□□ 0.16
CCDC43-203ENST00000588210 ZNF76P36508 570 aa16.06■□□□□ 0.16
CCDC43-203ENST00000588210 MTIF2P46199 727 aaKnown RBP16.06■□□□□ 0.16
CCDC43-203ENST00000588210 USP11P51784 963 aa16.06■□□□□ 0.16
CCDC43-203ENST00000588210 MTMR1Q13613 665 aa16.06■□□□□ 0.16
CCDC43-203ENST00000588210 NECAB2Q7Z6G3 386 aa16.06■□□□□ 0.16
CCDC43-203ENST00000588210 PCSK9Q8NBP7 692 aaKnown RBP16.06■□□□□ 0.16
CCDC43-203ENST00000588210 OR6J1Q8NGC5 347 aa16.06■□□□□ 0.16
CCDC43-203ENST00000588210 TBCKQ8TEA7 893 aa16.06■□□□□ 0.16
CCDC43-203ENST00000588210 COPS5Q92905 334 aa16.06■□□□□ 0.16
CCDC43-203ENST00000588210 PAWRQ96IZ0 340 aaKnown RBP16.06■□□□□ 0.16
CCDC43-203ENST00000588210 NHEJ1Q9H9Q4 299 aaPredicted RBP16.06■□□□□ 0.16
CCDC43-203ENST00000588210 ADAM21Q9UKJ8 722 aa16.06■□□□□ 0.16
CCDC43-203ENST00000588210 MCM3P25205 808 aa16.06■□□□□ 0.16
CCDC43-203ENST00000588210 HNRNPH2P55795 449 aaKnown RBP16.06■□□□□ 0.16
CCDC43-203ENST00000588210 NEDD9Q14511 834 aa16.06■□□□□ 0.16
CCDC43-203ENST00000588210 GNASQ5JWF2 1037 aa16.06■□□□□ 0.16
CCDC43-203ENST00000588210 CCSAPQ6IQ19 270 aaPredicted RBP16.06■□□□□ 0.16
CCDC43-203ENST00000588210 NIPA1Q7RTP0 329 aa16.06■□□□□ 0.16
CCDC43-203ENST00000588210 KIAA0895Q8NCT3 520 aa16.06■□□□□ 0.16
CCDC43-203ENST00000588210 EMID1Q96A84 441 aaPredicted RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms