RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 SCLT1Q96NL6 688 aa11.27□□□□□ -0.61
TPM4-207ENST00000588032 OSMRQ99650 979 aa11.27□□□□□ -0.61
TPM4-207ENST00000588032 MTRQ99707 1265 aa11.27□□□□□ -0.61
TPM4-207ENST00000588032 TSPYL2Q9H2G4 693 aaPredicted RBP11.27□□□□□ -0.61
TPM4-207ENST00000588032 ZSCAN16Q9H4T2 348 aaPredicted RBP11.27□□□□□ -0.61
TPM4-207ENST00000588032 ERVK-5Q9HDB9 667 aa11.27□□□□□ -0.61
TPM4-207ENST00000588032 C1orf112Q9NSG2 853 aa11.27□□□□□ -0.61
TPM4-207ENST00000588032 ST3GAL5Q9UNP4 418 aa11.27□□□□□ -0.61
TPM4-207ENST00000588032 TET1Q8NFU7 2136 aa11.27□□□□□ -0.61
TPM4-207ENST00000588032 ZBTB39O15060 712 aa11.26□□□□□ -0.61
TPM4-207ENST00000588032 STX6O43752 255 aa11.26□□□□□ -0.61
TPM4-207ENST00000588032 MED24O75448 989 aa11.26□□□□□ -0.61
TPM4-207ENST00000588032 CA3P07451 260 aa11.26□□□□□ -0.61
TPM4-207ENST00000588032 STAG3L1P0CL83 205 aa11.26□□□□□ -0.61
TPM4-207ENST00000588032 ZSCAN20P17040 1043 aaPredicted RBP11.26□□□□□ -0.61
TPM4-207ENST00000588032 CCT6AP40227 531 aaKnown RBP11.26□□□□□ -0.61
TPM4-207ENST00000588032 HTRA4P83105 476 aaPredicted RBP11.26□□□□□ -0.61
TPM4-207ENST00000588032 POU5F1BQ06416 359 aa11.26□□□□□ -0.61
TPM4-207ENST00000588032 DRP2Q13474 957 aa11.26□□□□□ -0.61
TPM4-207ENST00000588032 EMC2Q15006 297 aa11.26□□□□□ -0.61
TPM4-207ENST00000588032 SLC24A5Q71RS6 500 aa11.26□□□□□ -0.61
TPM4-207ENST00000588032 RHPN2Q8IUC4 686 aa11.26□□□□□ -0.61
TPM4-207ENST00000588032 PIGOQ8TEQ8 1089 aa11.26□□□□□ -0.61
TPM4-207ENST00000588032 AK8Q96MA6 479 aa11.26□□□□□ -0.61
TPM4-207ENST00000588032 FAM161BQ96MY7 647 aa11.26□□□□□ -0.61
TPM4-207ENST00000588032 ATP6V0A4Q9HBG4 840 aa11.26□□□□□ -0.61
TPM4-207ENST00000588032 RGS18Q9NS28 235 aa11.26□□□□□ -0.61
TPM4-207ENST00000588032 STXBP5LQ9Y2K9 1186 aa11.26□□□□□ -0.61
TPM4-207ENST00000588032 COL4A3BPQ9Y5P4 624 aa11.26□□□□□ -0.61
TPM4-207ENST00000588032 WDR81Q562E7 1941 aa11.25□□□□□ -0.61
TPM4-207ENST00000588032 DENND3A2RUS2 1198 aa11.25□□□□□ -0.61
TPM4-207ENST00000588032 SLC26A4O43511 780 aa11.25□□□□□ -0.61
TPM4-207ENST00000588032 UPP2O95045 317 aa11.25□□□□□ -0.61
TPM4-207ENST00000588032 MYOGP15173 224 aa11.25□□□□□ -0.61
TPM4-207ENST00000588032 SFPQP23246 707 aaKnown RBP eCLIP11.25□□□□□ -0.61
TPM4-207ENST00000588032 TFDP1Q14186 410 aa11.25□□□□□ -0.61
TPM4-207ENST00000588032 GRIN2CQ14957 1233 aa11.25□□□□□ -0.61
TPM4-207ENST00000588032 PCBP1Q15365 356 aaKnown RBP eCLIP11.25□□□□□ -0.61
TPM4-207ENST00000588032 SRGAP1Q7Z6B7 1085 aa11.25□□□□□ -0.61
TPM4-207ENST00000588032 RTN4RL1Q86UN2 441 aaPredicted RBP11.25□□□□□ -0.61
TPM4-207ENST00000588032 FERMT3Q86UX7 667 aa11.25□□□□□ -0.61
TPM4-207ENST00000588032 FAM228AQ86W67 206 aa11.25□□□□□ -0.61
TPM4-207ENST00000588032 NPAS4Q8IUM7 802 aa11.25□□□□□ -0.61
TPM4-207ENST00000588032 MCPH1Q8NEM0 835 aa11.25□□□□□ -0.61
TPM4-207ENST00000588032 SNX29Q8TEQ0 813 aa11.25□□□□□ -0.61
TPM4-207ENST00000588032 PRPF31Q8WWY3 499 aaKnown RBP11.25□□□□□ -0.61
TPM4-207ENST00000588032 TMEM143Q96AN5 459 aa11.25□□□□□ -0.61
TPM4-207ENST00000588032 GUCD1Q96NT3 240 aa11.25□□□□□ -0.61
TPM4-207ENST00000588032 PPP1R16BQ96T49 567 aa11.25□□□□□ -0.61
TPM4-207ENST00000588032 YME1L1Q96TA2 773 aa11.25□□□□□ -0.61
TPM4-207ENST00000588032 CDX2Q99626 313 aaPredicted RBP11.25□□□□□ -0.61
TPM4-207ENST00000588032 ADAM2Q99965 735 aa11.25□□□□□ -0.61
TPM4-207ENST00000588032 TMX1Q9H3N1 280 aa11.25□□□□□ -0.61
TPM4-207ENST00000588032 CHST12Q9NRB3 414 aa11.25□□□□□ -0.61
TPM4-207ENST00000588032 DACT1Q9NYF0 836 aa11.25□□□□□ -0.61
TPM4-207ENST00000588032 MTMR6Q9Y217 621 aa11.25□□□□□ -0.61
TPM4-207ENST00000588032 A0A087WZ62 844 aa11.24□□□□□ -0.61
TPM4-207ENST00000588032 ARHGEF35A5YM69 484 aa11.24□□□□□ -0.61
TPM4-207ENST00000588032 ARL2P36404 184 aa11.24□□□□□ -0.61
TPM4-207ENST00000588032 SARSP49591 514 aaKnown RBP11.24□□□□□ -0.61
TPM4-207ENST00000588032 FAM189BP81408 668 aa11.24□□□□□ -0.61
TPM4-207ENST00000588032 TAP1Q03518 808 aa11.24□□□□□ -0.61
TPM4-207ENST00000588032 LAMTOR4Q0VGL1 99 aa11.24□□□□□ -0.61
TPM4-207ENST00000588032 RESTQ13127 1097 aa11.24□□□□□ -0.61
TPM4-207ENST00000588032 DSC3Q14574 896 aa11.24□□□□□ -0.61
TPM4-207ENST00000588032 SF3A1Q15459 793 aaKnown RBP11.24□□□□□ -0.61
TPM4-207ENST00000588032 IL17AQ16552 155 aa11.24□□□□□ -0.61
TPM4-207ENST00000588032 FAM117BQ6P1L5 589 aa11.24□□□□□ -0.61
TPM4-207ENST00000588032 POTEGQ6S5H5 508 aa11.24□□□□□ -0.61
TPM4-207ENST00000588032 TMCO2Q7Z6W1 182 aaPredicted RBP11.24□□□□□ -0.61
TPM4-207ENST00000588032 CRIPAKQ8N1N5 446 aa11.24□□□□□ -0.61
TPM4-207ENST00000588032 NLRP4Q96MN2 994 aa11.24□□□□□ -0.61
TPM4-207ENST00000588032 SAMD11Q96NU1 681 aa11.24□□□□□ -0.61
TPM4-207ENST00000588032 GAS2L1Q99501 681 aaPredicted RBP11.24□□□□□ -0.61
TPM4-207ENST00000588032 FDXACB1Q9BRP7 624 aaPredicted RBP11.24□□□□□ -0.61
TPM4-207ENST00000588032 NT5C3AQ9H0P0 336 aa11.24□□□□□ -0.61
TPM4-207ENST00000588032 ELAC1Q9H777 363 aaKnown RBP11.24□□□□□ -0.61
TPM4-207ENST00000588032 IFT122Q9HBG6 1241 aa11.24□□□□□ -0.61
TPM4-207ENST00000588032 XPNPEP1Q9NQW7 623 aa11.24□□□□□ -0.61
TPM4-207ENST00000588032 LRFN2Q9ULH4 789 aa11.24□□□□□ -0.61
TPM4-207ENST00000588032 KIAA1024Q9UPX6 916 aa11.24□□□□□ -0.61
TPM4-207ENST00000588032 DNM3Q9UQ16 869 aa11.24□□□□□ -0.61
TPM4-207ENST00000588032 PCDHB7Q9Y5E2 793 aa11.24□□□□□ -0.61
TPM4-207ENST00000588032 EVPLQ92817 2033 aa11.23□□□□□ -0.61
TPM4-207ENST00000588032 VWA3AA6NCI4 1184 aa11.23□□□□□ -0.61
TPM4-207ENST00000588032 C9IYK1 514 aa11.23□□□□□ -0.61
TPM4-207ENST00000588032 DGKIO75912 1065 aa11.23□□□□□ -0.61
TPM4-207ENST00000588032 SRGAP2CP0DJJ0 459 aa11.23□□□□□ -0.61
TPM4-207ENST00000588032 SKIP12755 728 aa11.23□□□□□ -0.61
TPM4-207ENST00000588032 CYP11B2P19099 503 aa11.23□□□□□ -0.61
TPM4-207ENST00000588032 LONP1P36776 959 aaKnown RBP11.23□□□□□ -0.61
TPM4-207ENST00000588032 PHKA2P46019 1235 aa11.23□□□□□ -0.61
TPM4-207ENST00000588032 ERVK-21P61565 698 aa11.23□□□□□ -0.61
TPM4-207ENST00000588032 NCBP1Q09161 790 aaKnown RBP11.23□□□□□ -0.61
TPM4-207ENST00000588032 HYIQ5T013 277 aa11.23□□□□□ -0.61
TPM4-207ENST00000588032 PADI6Q6TGC4 694 aa11.23□□□□□ -0.61
TPM4-207ENST00000588032 IFNLR1Q8IU57 520 aaPredicted RBP11.23□□□□□ -0.61
TPM4-207ENST00000588032 KSR1Q8IVT5 923 aa11.23□□□□□ -0.61
TPM4-207ENST00000588032 RNF149Q8NC42 400 aa11.23□□□□□ -0.61
TPM4-207ENST00000588032 LINC01599Q8WXQ3 324 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms