RNA–Protein interactions for RNA: ENST00000587580.1

CHAF1A-205, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 3

Gene CHAF1A, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-205ENST00000587580 CDC42EP1Q00587 391 aa26.24■■□□□ 1.79
CHAF1A-205ENST00000587580 EMC2Q15006 297 aa26.24■■□□□ 1.79
CHAF1A-205ENST00000587580 FAM43BQ6ZT52 329 aaPredicted RBP26.24■■□□□ 1.79
CHAF1A-205ENST00000587580 C4orf32Q8N8J7 132 aa26.24■■□□□ 1.79
CHAF1A-205ENST00000587580 CCDC43Q96MW1 224 aaKnown RBP26.24■■□□□ 1.79
CHAF1A-205ENST00000587580 ADAM2Q99965 735 aa26.24■■□□□ 1.79
CHAF1A-205ENST00000587580 COL6A3P12111 3177 aa26.24■■□□□ 1.79
CHAF1A-205ENST00000587580 ERVK-21P61565 698 aa26.23■■□□□ 1.79
CHAF1A-205ENST00000587580 PTGDRQ13258 359 aa26.23■■□□□ 1.79
CHAF1A-205ENST00000587580 RILPL1Q5EBL4 403 aa26.23■■□□□ 1.79
CHAF1A-205ENST00000587580 NPAS4Q8IUM7 802 aa26.23■■□□□ 1.79
CHAF1A-205ENST00000587580 ERMNQ8TAM6 284 aa26.23■■□□□ 1.79
CHAF1A-205ENST00000587580 GCOM2Q9BZD3 368 aaPredicted RBP26.23■■□□□ 1.79
CHAF1A-205ENST00000587580 TUFT1Q9NNX1 390 aa26.23■■□□□ 1.79
CHAF1A-205ENST00000587580 ANKEF1Q9NU02 776 aa26.23■■□□□ 1.79
CHAF1A-205ENST00000587580 ADGRA3Q8IWK6 1321 aa26.22■■□□□ 1.79
CHAF1A-205ENST00000587580 A0A087WZ62 844 aa26.22■■□□□ 1.79
CHAF1A-205ENST00000587580 MED24O75448 989 aa26.22■■□□□ 1.79
CHAF1A-205ENST00000587580 STAG3L1P0CL83 205 aa26.22■■□□□ 1.79
CHAF1A-205ENST00000587580 SPATA31C1P0DKV0 1188 aa26.22■■□□□ 1.79
CHAF1A-205ENST00000587580 SARSP49591 514 aaKnown RBP26.22■■□□□ 1.79
CHAF1A-205ENST00000587580 ZNF410Q86VK4 478 aa26.22■■□□□ 1.79
CHAF1A-205ENST00000587580 PIGOQ8TEQ8 1089 aa26.22■■□□□ 1.79
CHAF1A-205ENST00000587580 TMEM143Q96AN5 459 aa26.22■■□□□ 1.79
CHAF1A-205ENST00000587580 NLRP4Q96MN2 994 aa26.22■■□□□ 1.79
CHAF1A-205ENST00000587580 MTRQ99707 1265 aa26.22■■□□□ 1.79
CHAF1A-205ENST00000587580 FDXACB1Q9BRP7 624 aaPredicted RBP26.22■■□□□ 1.79
CHAF1A-205ENST00000587580 RC3H2Q9HBD1 1191 aaKnown RBP26.22■■□□□ 1.79
CHAF1A-205ENST00000587580 EIF4ENIF1Q9NRA8 985 aaKnown RBP26.22■■□□□ 1.79
CHAF1A-205ENST00000587580 C1orf112Q9NSG2 853 aa26.22■■□□□ 1.79
CHAF1A-205ENST00000587580 CHD7Q9P2D1 2997 aa26.22■■□□□ 1.79
CHAF1A-205ENST00000587580 NLRC5Q86WI3 1866 aa26.21■■□□□ 1.79
CHAF1A-205ENST00000587580 K7ELQ4 463 aaPredicted RBP26.21■■□□□ 1.79
CHAF1A-205ENST00000587580 GAS2O43903 313 aaKnown RBP26.21■■□□□ 1.79
CHAF1A-205ENST00000587580 FGFR4P22455 802 aa26.21■■□□□ 1.79
CHAF1A-205ENST00000587580 FXR2P51116 673 aaKnown RBP eCLIP26.21■■□□□ 1.79
CHAF1A-205ENST00000587580 CATSPER3Q86XQ3 398 aa26.21■■□□□ 1.79
CHAF1A-205ENST00000587580 KSR1Q8IVT5 923 aa26.21■■□□□ 1.79
CHAF1A-205ENST00000587580 PSPC1Q8WXF1 523 aaKnown RBP26.21■■□□□ 1.79
CHAF1A-205ENST00000587580 C17orf80Q9BSJ5 609 aa26.21■■□□□ 1.79
CHAF1A-205ENST00000587580 POLR3CQ9BUI4 534 aaPredicted RBP26.21■■□□□ 1.79
CHAF1A-205ENST00000587580 RGS18Q9NS28 235 aa26.21■■□□□ 1.79
CHAF1A-205ENST00000587580 LRFN2Q9ULH4 789 aa26.21■■□□□ 1.79
CHAF1A-205ENST00000587580 COL4A3BPQ9Y5P4 624 aa26.21■■□□□ 1.79
CHAF1A-205ENST00000587580 A0A087WWV3 80 aa26.2■■□□□ 1.78
CHAF1A-205ENST00000587580 LAD1O00515 517 aa26.2■■□□□ 1.78
CHAF1A-205ENST00000587580 CSDE1O75534 798 aaKnown RBP26.2■■□□□ 1.78
CHAF1A-205ENST00000587580 DGKIO75912 1065 aa26.2■■□□□ 1.78
CHAF1A-205ENST00000587580 RARRES1P49788 294 aa26.2■■□□□ 1.78
CHAF1A-205ENST00000587580 DSC3Q14574 896 aa26.2■■□□□ 1.78
CHAF1A-205ENST00000587580 HAUS3Q68CZ6 603 aa26.2■■□□□ 1.78
CHAF1A-205ENST00000587580 CRIPAKQ8N1N5 446 aa26.2■■□□□ 1.78
CHAF1A-205ENST00000587580 FIBCD1Q8N539 461 aa26.2■■□□□ 1.78
CHAF1A-205ENST00000587580 GDPD5Q8WTR4 605 aa26.2■■□□□ 1.78
CHAF1A-205ENST00000587580 TCP11Q8WWU5 503 aa26.2■■□□□ 1.78
CHAF1A-205ENST00000587580 RALGAPA2Q2PPJ7 1873 aa26.19■■□□□ 1.78
CHAF1A-205ENST00000587580 GRB10Q13322 594 aa26.19■■□□□ 1.78
CHAF1A-205ENST00000587580 POTEGQ6S5H5 508 aa26.19■■□□□ 1.78
CHAF1A-205ENST00000587580 SLC24A5Q71RS6 500 aa26.19■■□□□ 1.78
CHAF1A-205ENST00000587580 PPM1EQ8WY54 764 aa26.19■■□□□ 1.78
CHAF1A-205ENST00000587580 ZNF689Q96CS4 500 aaPredicted RBP26.19■■□□□ 1.78
CHAF1A-205ENST00000587580 SAMD11Q96NU1 681 aa26.19■■□□□ 1.78
CHAF1A-205ENST00000587580 ATP6V0A4Q9HBG4 840 aa26.19■■□□□ 1.78
CHAF1A-205ENST00000587580 XPNPEP1Q9NQW7 623 aa26.19■■□□□ 1.78
CHAF1A-205ENST00000587580 VPS37CA5D8V6 355 aaPredicted RBP26.18■■□□□ 1.78
CHAF1A-205ENST00000587580 C9IYK1 514 aa26.18■■□□□ 1.78
CHAF1A-205ENST00000587580 GTPBP6O43824 516 aaPredicted RBP26.18■■□□□ 1.78
CHAF1A-205ENST00000587580 DGAT1O75907 488 aa26.18■■□□□ 1.78
CHAF1A-205ENST00000587580 ZSCAN20P17040 1043 aaPredicted RBP26.18■■□□□ 1.78
CHAF1A-205ENST00000587580 SFPQP23246 707 aaKnown RBP eCLIP26.18■■□□□ 1.78
CHAF1A-205ENST00000587580 RPA1P27694 616 aa26.18■■□□□ 1.78
CHAF1A-205ENST00000587580 BTG3Q14201 252 aaPredicted RBP26.18■■□□□ 1.78
CHAF1A-205ENST00000587580 MICALL1Q8N3F8 863 aa26.18■■□□□ 1.78
CHAF1A-205ENST00000587580 FBXO22Q8NEZ5 403 aa26.18■■□□□ 1.78
CHAF1A-205ENST00000587580 PRPF31Q8WWY3 499 aaKnown RBP26.18■■□□□ 1.78
CHAF1A-205ENST00000587580 RAB34Q9BZG1 259 aa26.18■■□□□ 1.78
CHAF1A-205ENST00000587580 INO80BQ9C086 356 aaPredicted RBP26.18■■□□□ 1.78
CHAF1A-205ENST00000587580 LRWD1Q9UFC0 647 aa26.18■■□□□ 1.78
CHAF1A-205ENST00000587580 PCDHB7Q9Y5E2 793 aa26.18■■□□□ 1.78
CHAF1A-205ENST00000587580 XRCC6P12956 609 aaKnown RBP eCLIP26.17■■□□□ 1.78
CHAF1A-205ENST00000587580 PDCP20941 246 aa26.17■■□□□ 1.78
CHAF1A-205ENST00000587580 CCT6AP40227 531 aaKnown RBP26.17■■□□□ 1.78
CHAF1A-205ENST00000587580 PRPHP41219 470 aa26.17■■□□□ 1.78
CHAF1A-205ENST00000587580 LAMTOR4Q0VGL1 99 aa26.17■■□□□ 1.78
CHAF1A-205ENST00000587580 EPC2Q52LR7 807 aa26.17■■□□□ 1.78
CHAF1A-205ENST00000587580 FERMT3Q86UX7 667 aa26.17■■□□□ 1.78
CHAF1A-205ENST00000587580 INTS4Q96HW7 963 aaKnown RBP26.17■■□□□ 1.78
CHAF1A-205ENST00000587580 NACC1Q96RE7 527 aa26.17■■□□□ 1.78
CHAF1A-205ENST00000587580 FOXD4L1Q9NU39 408 aa26.17■■□□□ 1.78
CHAF1A-205ENST00000587580 RNF216Q9NWF9 866 aaPredicted RBP26.17■■□□□ 1.78
CHAF1A-205ENST00000587580 LPXNO60711 386 aa26.16■■□□□ 1.78
CHAF1A-205ENST00000587580 USO1O60763 962 aaKnown RBP26.16■■□□□ 1.78
CHAF1A-205ENST00000587580 GATMP50440 423 aa26.16■■□□□ 1.78
CHAF1A-205ENST00000587580 ATP2C1P98194 919 aaPredicted RBP26.16■■□□□ 1.78
CHAF1A-205ENST00000587580 CCDC85BQ15834 202 aaPredicted RBP26.16■■□□□ 1.78
CHAF1A-205ENST00000587580 PAN2Q504Q3 1202 aaKnown RBP26.16■■□□□ 1.78
CHAF1A-205ENST00000587580 TMEM192Q8IY95 271 aa26.16■■□□□ 1.78
CHAF1A-205ENST00000587580 CMTR2Q8IYT2 770 aaKnown RBP26.16■■□□□ 1.78
CHAF1A-205ENST00000587580 IGSF22Q8N9C0 903 aa26.16■■□□□ 1.78
CHAF1A-205ENST00000587580 SLC17A8Q8NDX2 589 aa26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms