RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 C9IYK1 514 aa19.82■□□□□ 0.76
TPM4-206ENST00000587201 WNT7AO00755 349 aa19.82■□□□□ 0.76
TPM4-206ENST00000587201 LINC00271P0C7V0 271 aa19.82■□□□□ 0.76
TPM4-206ENST00000587201 DARSP14868 501 aaKnown RBP19.82■□□□□ 0.76
TPM4-206ENST00000587201 ZSCAN20P17040 1043 aaPredicted RBP19.82■□□□□ 0.76
TPM4-206ENST00000587201 ATP2B1P20020 1258 aa19.82■□□□□ 0.76
TPM4-206ENST00000587201 GATMP50440 423 aa19.82■□□□□ 0.76
TPM4-206ENST00000587201 NPEPPSP55786 919 aa19.82■□□□□ 0.76
TPM4-206ENST00000587201 CDC42EP1Q00587 391 aa19.82■□□□□ 0.76
TPM4-206ENST00000587201 C4orf19Q8IY42 314 aa19.82■□□□□ 0.76
TPM4-206ENST00000587201 HLA-CQ95604 372 aa19.82■□□□□ 0.76
TPM4-206ENST00000587201 MRPL38Q96DV4 380 aaKnown RBP19.82■□□□□ 0.76
TPM4-206ENST00000587201 CEP170P1Q96L14 293 aa19.82■□□□□ 0.76
TPM4-206ENST00000587201 SUCLA2Q9P2R7 463 aaPredicted RBP19.82■□□□□ 0.76
TPM4-206ENST00000587201 MRPL42Q9Y6G3 142 aaKnown RBP19.82■□□□□ 0.76
TPM4-206ENST00000587201 NLRC5Q86WI3 1866 aa19.82■□□□□ 0.76
TPM4-206ENST00000587201 VCANP13611 3396 aa19.81■□□□□ 0.76
TPM4-206ENST00000587201 C5orf67F2Z3F1 127 aa19.81■□□□□ 0.76
TPM4-206ENST00000587201 ST18O60284 1047 aa19.81■□□□□ 0.76
TPM4-206ENST00000587201 FGFR4P22455 802 aa19.81■□□□□ 0.76
TPM4-206ENST00000587201 TXKP42681 527 aa19.81■□□□□ 0.76
TPM4-206ENST00000587201 CYP4A11Q02928 519 aa19.81■□□□□ 0.76
TPM4-206ENST00000587201 TFF2Q03403 129 aa19.81■□□□□ 0.76
TPM4-206ENST00000587201 GNL2Q13823 731 aaKnown RBP19.81■□□□□ 0.76
TPM4-206ENST00000587201 CTTNQ14247 550 aaKnown RBP19.81■□□□□ 0.76
TPM4-206ENST00000587201 DSC3Q14574 896 aa19.81■□□□□ 0.76
TPM4-206ENST00000587201 AAK1Q2M2I8 961 aa19.81■□□□□ 0.76
TPM4-206ENST00000587201 OTUD6AQ7L8S5 288 aa19.81■□□□□ 0.76
TPM4-206ENST00000587201 RHPN2Q8IUC4 686 aa19.81■□□□□ 0.76
TPM4-206ENST00000587201 C11orf84Q9BUA3 381 aaPredicted RBP19.81■□□□□ 0.76
TPM4-206ENST00000587201 GCOM2Q9BZD3 368 aaPredicted RBP19.81■□□□□ 0.76
TPM4-206ENST00000587201 ZSWIM4Q9H7M6 989 aa19.81■□□□□ 0.76
TPM4-206ENST00000587201 TTC12Q9H892 705 aaPredicted RBP19.81■□□□□ 0.76
TPM4-206ENST00000587201 RALGAPA2Q2PPJ7 1873 aa19.81■□□□□ 0.76
TPM4-206ENST00000587201 A0A087WZ62 844 aa19.8■□□□□ 0.76
TPM4-206ENST00000587201 YWHABP31946 246 aaKnown RBP19.8■□□□□ 0.76
TPM4-206ENST00000587201 MCM7P33993 719 aa19.8■□□□□ 0.76
TPM4-206ENST00000587201 POLGP54098 1239 aaPredicted RBP19.8■□□□□ 0.76
TPM4-206ENST00000587201 TPH2Q8IWU9 490 aa19.8■□□□□ 0.76
TPM4-206ENST00000587201 EXOC8Q8IYI6 725 aa19.8■□□□□ 0.76
TPM4-206ENST00000587201 ZNF579Q8NAF0 562 aaKnown RBP19.8■□□□□ 0.76
TPM4-206ENST00000587201 FBXO18Q8NFZ0 1043 aa19.8■□□□□ 0.76
TPM4-206ENST00000587201 SLC7A3Q8WY07 619 aa19.8■□□□□ 0.76
TPM4-206ENST00000587201 EIF2AK1Q9BQI3 630 aaKnown RBP19.8■□□□□ 0.76
TPM4-206ENST00000587201 FDXACB1Q9BRP7 624 aaPredicted RBP19.8■□□□□ 0.76
TPM4-206ENST00000587201 FOXP1Q9H334 677 aaPredicted RBP19.8■□□□□ 0.76
TPM4-206ENST00000587201 ATP6V0A4Q9HBG4 840 aa19.8■□□□□ 0.76
TPM4-206ENST00000587201 PPME1Q9Y570 386 aa19.8■□□□□ 0.76
TPM4-206ENST00000587201 TBKBP1A7MCY6 615 aa19.79■□□□□ 0.76
TPM4-206ENST00000587201 CSDE1O75534 798 aaKnown RBP19.79■□□□□ 0.76
TPM4-206ENST00000587201 SLITRK3O94933 977 aa19.79■□□□□ 0.76
TPM4-206ENST00000587201 FAM189BP81408 668 aa19.79■□□□□ 0.76
TPM4-206ENST00000587201 TIGD5Q53EQ6 642 aa19.79■□□□□ 0.76
TPM4-206ENST00000587201 XKR9Q5GH70 373 aa19.79■□□□□ 0.76
TPM4-206ENST00000587201 FAM102BQ5T8I3 360 aa19.79■□□□□ 0.76
TPM4-206ENST00000587201 ZNF410Q86VK4 478 aa19.79■□□□□ 0.76
TPM4-206ENST00000587201 NLRP4Q96MN2 994 aa19.79■□□□□ 0.76
TPM4-206ENST00000587201 MTMR9Q96QG7 549 aa19.79■□□□□ 0.76
TPM4-206ENST00000587201 PLVAPQ9BX97 442 aa19.79■□□□□ 0.76
TPM4-206ENST00000587201 ELAC1Q9H777 363 aaKnown RBP19.79■□□□□ 0.76
TPM4-206ENST00000587201 BMP2KQ9NSY1 1161 aaPredicted RBP19.79■□□□□ 0.76
TPM4-206ENST00000587201 TMEM161AQ9NX61 479 aa19.79■□□□□ 0.76
TPM4-206ENST00000587201 GRM6O15303 877 aa19.78■□□□□ 0.76
TPM4-206ENST00000587201 RFC5P40937 340 aa19.78■□□□□ 0.76
TPM4-206ENST00000587201 SPOUT1Q5T280 376 aaKnown RBP19.78■□□□□ 0.76
TPM4-206ENST00000587201 KSR1Q8IVT5 923 aa19.78■□□□□ 0.76
TPM4-206ENST00000587201 NEK9Q8TD19 979 aa19.78■□□□□ 0.76
TPM4-206ENST00000587201 INO80BQ9C086 356 aaPredicted RBP19.78■□□□□ 0.76
TPM4-206ENST00000587201 LMAN2LQ9H0V9 348 aa19.78■□□□□ 0.76
TPM4-206ENST00000587201 TMEM60Q9H2L4 133 aa19.78■□□□□ 0.76
TPM4-206ENST00000587201 DHX33Q9H6R0 707 aaKnown RBP19.78■□□□□ 0.76
TPM4-206ENST00000587201 ZBTB39O15060 712 aa19.77■□□□□ 0.76
TPM4-206ENST00000587201 CSPG5O95196 566 aa19.77■□□□□ 0.76
TPM4-206ENST00000587201 FGFR1P11362 822 aa19.77■□□□□ 0.76
TPM4-206ENST00000587201 SFPQP23246 707 aaKnown RBP eCLIP19.77■□□□□ 0.76
TPM4-206ENST00000587201 KCNQ1P51787 676 aa19.77■□□□□ 0.76
TPM4-206ENST00000587201 ZNF174Q15697 407 aa19.77■□□□□ 0.76
TPM4-206ENST00000587201 TMEM143Q96AN5 459 aa19.77■□□□□ 0.76
TPM4-206ENST00000587201 HSD17B14Q9BPX1 270 aa19.77■□□□□ 0.76
TPM4-206ENST00000587201 ALG13Q9NP73 1137 aaKnown RBP19.77■□□□□ 0.76
TPM4-206ENST00000587201 COL4A3BPQ9Y5P4 624 aa19.77■□□□□ 0.76
TPM4-206ENST00000587201 CUL9Q8IWT3 2517 aa19.76■□□□□ 0.75
TPM4-206ENST00000587201 POTEMA6NI47 508 aa19.76■□□□□ 0.75
TPM4-206ENST00000587201 EMC2Q15006 297 aa19.76■□□□□ 0.75
TPM4-206ENST00000587201 NAALADL2Q58DX5 795 aa19.76■□□□□ 0.75
TPM4-206ENST00000587201 TCEAL5Q5H9L2 206 aa19.76■□□□□ 0.75
TPM4-206ENST00000587201 ECHDC2Q86YB7 292 aa19.76■□□□□ 0.75
TPM4-206ENST00000587201 NOSTRINQ8IVI9 506 aa19.76■□□□□ 0.75
TPM4-206ENST00000587201 RNF169Q8NCN4 708 aa19.76■□□□□ 0.75
TPM4-206ENST00000587201 ADAMTS19Q8TE59 1207 aa19.76■□□□□ 0.75
TPM4-206ENST00000587201 TCP11Q8WWU5 503 aa19.76■□□□□ 0.75
TPM4-206ENST00000587201 PSPC1Q8WXF1 523 aaKnown RBP19.76■□□□□ 0.75
TPM4-206ENST00000587201 P2RX5Q93086 422 aa19.76■□□□□ 0.75
TPM4-206ENST00000587201 NSUN3Q9H649 340 aaKnown RBP19.76■□□□□ 0.75
TPM4-206ENST00000587201 UBE2ZQ9H832 354 aaPredicted RBP19.76■□□□□ 0.75
TPM4-206ENST00000587201 CHST12Q9NRB3 414 aa19.76■□□□□ 0.75
TPM4-206ENST00000587201 DACT1Q9NYF0 836 aa19.76■□□□□ 0.75
TPM4-206ENST00000587201 PLAGL2Q9UPG8 496 aa19.76■□□□□ 0.75
TPM4-206ENST00000587201 HOXA2O43364 376 aa19.75■□□□□ 0.75
TPM4-206ENST00000587201 GAS2O43903 313 aaKnown RBP19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms