RNA–Protein interactions for RNA: ENST00000586538.1

ACTN4-209, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-209ENST00000586538 LRRC71Q8N4P6 559 aa12.62□□□□□ -0.39
ACTN4-209ENST00000586538 LINC01465Q8N7H1 131 aa12.62□□□□□ -0.39
ACTN4-209ENST00000586538 GTF3C6Q969F1 213 aa12.62□□□□□ -0.39
ACTN4-209ENST00000586538 PPP1R16BQ96T49 567 aa12.62□□□□□ -0.39
ACTN4-209ENST00000586538 POP1Q99575 1024 aaKnown RBP12.62□□□□□ -0.39
ACTN4-209ENST00000586538 LARP6Q9BRS8 491 aaKnown RBP12.62□□□□□ -0.39
ACTN4-209ENST00000586538 KCNMB3Q9NPA1 279 aa12.62□□□□□ -0.39
ACTN4-209ENST00000586538 PUF60Q9UHX1 559 aaKnown RBP12.62□□□□□ -0.39
ACTN4-209ENST00000586538 KCNJ14Q9UNX9 436 aa12.62□□□□□ -0.39
ACTN4-209ENST00000586538 PLAGL2Q9UPG8 496 aa12.62□□□□□ -0.39
ACTN4-209ENST00000586538 NCOR1O75376 2440 aa12.62□□□□□ -0.39
ACTN4-209ENST00000586538 DDX11L8A8MPP1 907 aa12.61□□□□□ -0.39
ACTN4-209ENST00000586538 GRM6O15303 877 aa12.61□□□□□ -0.39
ACTN4-209ENST00000586538 MAFO75444 373 aaPredicted RBP12.61□□□□□ -0.39
ACTN4-209ENST00000586538 DARSP14868 501 aaKnown RBP12.61□□□□□ -0.39
ACTN4-209ENST00000586538 IBSPP21815 317 aaPredicted RBP12.61□□□□□ -0.39
ACTN4-209ENST00000586538 RFC5P40937 340 aa12.61□□□□□ -0.39
ACTN4-209ENST00000586538 RAB27AP51159 221 aa12.61□□□□□ -0.39
ACTN4-209ENST00000586538 NEK4P51957 841 aa12.61□□□□□ -0.39
ACTN4-209ENST00000586538 COL19A1Q14993 1142 aa12.61□□□□□ -0.39
ACTN4-209ENST00000586538 SAFBQ15424 915 aaKnown RBP eCLIP12.61□□□□□ -0.39
ACTN4-209ENST00000586538 TARBP2Q15633 366 aaKnown RBP12.61□□□□□ -0.39
ACTN4-209ENST00000586538 NPY5RQ15761 445 aa12.61□□□□□ -0.39
ACTN4-209ENST00000586538 UGCGQ16739 394 aa12.61□□□□□ -0.39
ACTN4-209ENST00000586538 THNSL1Q8IYQ7 743 aa12.61□□□□□ -0.39
ACTN4-209ENST00000586538 KLHL23Q8NBE8 558 aa12.61□□□□□ -0.39
ACTN4-209ENST00000586538 TCP11Q8WWU5 503 aa12.61□□□□□ -0.39
ACTN4-209ENST00000586538 CCDC43Q96MW1 224 aaKnown RBP12.61□□□□□ -0.39
ACTN4-209ENST00000586538 AIFM3Q96NN9 605 aa12.61□□□□□ -0.39
ACTN4-209ENST00000586538 CDCA3Q99618 268 aaPredicted RBP12.61□□□□□ -0.39
ACTN4-209ENST00000586538 ADAMTS10Q9H324 1103 aa12.61□□□□□ -0.39
ACTN4-209ENST00000586538 LZTS1Q9Y250 596 aa12.61□□□□□ -0.39
ACTN4-209ENST00000586538 TCF20Q9UGU0 1960 aaKnown RBP12.61□□□□□ -0.39
ACTN4-209ENST00000586538 IGKV6-21A0A0C4DH24 114 aa12.6□□□□□ -0.39
ACTN4-209ENST00000586538 A0A0U1RQF3 1178 aa12.6□□□□□ -0.39
ACTN4-209ENST00000586538 GRXCR2A6NFK2 248 aa12.6□□□□□ -0.39
ACTN4-209ENST00000586538 SLC37A4O43826 429 aa12.6□□□□□ -0.39
ACTN4-209ENST00000586538 MGEA5O60502 916 aa12.6□□□□□ -0.39
ACTN4-209ENST00000586538 ITGB1P05556 798 aa12.6□□□□□ -0.39
ACTN4-209ENST00000586538 SSTR3P32745 418 aaPredicted RBP12.6□□□□□ -0.39
ACTN4-209ENST00000586538 POLGP54098 1239 aaPredicted RBP12.6□□□□□ -0.39
ACTN4-209ENST00000586538 FAM189BP81408 668 aa12.6□□□□□ -0.39
ACTN4-209ENST00000586538 KRT17Q04695 432 aa12.6□□□□□ -0.39
ACTN4-209ENST00000586538 PCBP1Q15365 356 aaKnown RBP eCLIP12.6□□□□□ -0.39
ACTN4-209ENST00000586538 EPHA7Q15375 998 aa12.6□□□□□ -0.39
ACTN4-209ENST00000586538 FAM178BQ8IXR5 827 aa12.6□□□□□ -0.39
ACTN4-209ENST00000586538 C4orf19Q8IY42 314 aa12.6□□□□□ -0.39
ACTN4-209ENST00000586538 MICAL1Q8TDZ2 1067 aa12.6□□□□□ -0.39
ACTN4-209ENST00000586538 POF1BQ8WVV4 589 aa12.6□□□□□ -0.39
ACTN4-209ENST00000586538 ZSWIM4Q9H7M6 989 aa12.6□□□□□ -0.39
ACTN4-209ENST00000586538 CDHR5Q9HBB8 845 aa12.6□□□□□ -0.39
ACTN4-209ENST00000586538 ALG13Q9NP73 1137 aaKnown RBP12.6□□□□□ -0.39
ACTN4-209ENST00000586538 CYP26B1Q9NR63 512 aa12.6□□□□□ -0.39
ACTN4-209ENST00000586538 TLR9Q9NR96 1032 aa12.6□□□□□ -0.39
ACTN4-209ENST00000586538 STK39Q9UEW8 545 aa12.6□□□□□ -0.39
ACTN4-209ENST00000586538 FNDC1Q4ZHG4 1894 aaPredicted RBP12.59□□□□□ -0.39
ACTN4-209ENST00000586538 REV3LO60673 3130 aa12.59□□□□□ -0.39
ACTN4-209ENST00000586538 ASAP2O43150 1006 aa12.59□□□□□ -0.39
ACTN4-209ENST00000586538 EDIL3O43854 480 aa12.59□□□□□ -0.39
ACTN4-209ENST00000586538 ALADP13716 330 aa12.59□□□□□ -0.39
ACTN4-209ENST00000586538 NDUFV1P49821 464 aa12.59□□□□□ -0.39
ACTN4-209ENST00000586538 DSC3Q14574 896 aa12.59□□□□□ -0.39
ACTN4-209ENST00000586538 ME3Q16798 604 aa12.59□□□□□ -0.39
ACTN4-209ENST00000586538 CTC1Q2NKJ3 1217 aa12.59□□□□□ -0.39
ACTN4-209ENST00000586538 RHPN2Q8IUC4 686 aa12.59□□□□□ -0.39
ACTN4-209ENST00000586538 GJD3Q8N144 294 aa12.59□□□□□ -0.39
ACTN4-209ENST00000586538 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.59□□□□□ -0.39
ACTN4-209ENST00000586538 SPPL3Q8TCT6 385 aa12.59□□□□□ -0.39
ACTN4-209ENST00000586538 PSPC1Q8WXF1 523 aaKnown RBP12.59□□□□□ -0.39
ACTN4-209ENST00000586538 CEP170P1Q96L14 293 aa12.59□□□□□ -0.39
ACTN4-209ENST00000586538 NECAB3Q96P71 396 aaPredicted RBP12.59□□□□□ -0.39
ACTN4-209ENST00000586538 LXNQ9BS40 222 aa12.59□□□□□ -0.39
ACTN4-209ENST00000586538 TRAIPQ9BWF2 469 aa12.59□□□□□ -0.39
ACTN4-209ENST00000586538 SUCLA2Q9P2R7 463 aaPredicted RBP12.59□□□□□ -0.39
ACTN4-209ENST00000586538 VAV3Q9UKW4 847 aa12.59□□□□□ -0.39
ACTN4-209ENST00000586538 KIAA1671Q9BY89 1806 aa12.59□□□□□ -0.39
ACTN4-209ENST00000586538 H3BQ06 376 aaPredicted RBP12.58□□□□□ -0.4
ACTN4-209ENST00000586538 FGF18O76093 207 aa12.58□□□□□ -0.4
ACTN4-209ENST00000586538 YWHABP31946 246 aaKnown RBP12.58□□□□□ -0.4
ACTN4-209ENST00000586538 PLCB3Q01970 1234 aa12.58□□□□□ -0.4
ACTN4-209ENST00000586538 NCBP1Q09161 790 aaKnown RBP12.58□□□□□ -0.4
ACTN4-209ENST00000586538 HYAL1Q12794 435 aa12.58□□□□□ -0.4
ACTN4-209ENST00000586538 ORC2Q13416 577 aaPredicted RBP12.58□□□□□ -0.4
ACTN4-209ENST00000586538 SMAD4Q13485 552 aaKnown RBP12.58□□□□□ -0.4
ACTN4-209ENST00000586538 CALCRLQ16602 461 aa12.58□□□□□ -0.4
ACTN4-209ENST00000586538 FAM102BQ5T8I3 360 aa12.58□□□□□ -0.4
ACTN4-209ENST00000586538 TWF2Q6IBS0 349 aaKnown RBP12.58□□□□□ -0.4
ACTN4-209ENST00000586538 NCAPH2Q6IBW4 605 aa12.58□□□□□ -0.4
ACTN4-209ENST00000586538 CATSPER4Q7RTX7 472 aa12.58□□□□□ -0.4
ACTN4-209ENST00000586538 SRGAP1Q7Z6B7 1085 aa12.58□□□□□ -0.4
ACTN4-209ENST00000586538 ECHDC2Q86YB7 292 aa12.58□□□□□ -0.4
ACTN4-209ENST00000586538 EFHBQ8N7U6 833 aa12.58□□□□□ -0.4
ACTN4-209ENST00000586538 COLGALT1Q8NBJ5 622 aa12.58□□□□□ -0.4
ACTN4-209ENST00000586538 GJA10Q969M2 543 aa12.58□□□□□ -0.4
ACTN4-209ENST00000586538 PGBD4Q96DM1 585 aa12.58□□□□□ -0.4
ACTN4-209ENST00000586538 ZNF558Q96NG5 402 aa12.58□□□□□ -0.4
ACTN4-209ENST00000586538 NGRNQ9NPE2 291 aaKnown RBP12.58□□□□□ -0.4
ACTN4-209ENST00000586538 TYW1Q9NV66 732 aaKnown RBP12.58□□□□□ -0.4
ACTN4-209ENST00000586538 CD207Q9UJ71 328 aa12.58□□□□□ -0.4
ACTN4-209ENST00000586538 PCDHA12Q9UN75 941 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms