RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 KBTBD4Q9NVX7 518 aa12.14□□□□□ -0.47
TOP3A-216ENST00000583804 SUCLA2Q9P2R7 463 aaPredicted RBP12.14□□□□□ -0.47
TOP3A-216ENST00000583804 AKT3Q9Y243 479 aa12.14□□□□□ -0.47
TOP3A-216ENST00000583804 IGKV6-21A0A0C4DH24 114 aa12.14□□□□□ -0.47
TOP3A-216ENST00000583804 SMIM35A0A1B0GVV1 85 aa12.14□□□□□ -0.47
TOP3A-216ENST00000583804 DRP2Q13474 957 aa12.14□□□□□ -0.47
TOP3A-216ENST00000583804 SNX17Q15036 470 aa12.14□□□□□ -0.47
TOP3A-216ENST00000583804 C1orf53Q5VUE5 145 aa12.14□□□□□ -0.47
TOP3A-216ENST00000583804 IER5Q5VY09 327 aa12.14□□□□□ -0.47
TOP3A-216ENST00000583804 KANK3Q6NY19 840 aa12.14□□□□□ -0.47
TOP3A-216ENST00000583804 TAF2Q6P1X5 1199 aa12.14□□□□□ -0.47
TOP3A-216ENST00000583804 ANKRD33Q7Z3H0 272 aa12.14□□□□□ -0.47
TOP3A-216ENST00000583804 RSPH3Q86UC2 560 aa12.14□□□□□ -0.47
TOP3A-216ENST00000583804 SERINC5Q86VE9 423 aa12.14□□□□□ -0.47
TOP3A-216ENST00000583804 TCP11Q8WWU5 503 aa12.14□□□□□ -0.47
TOP3A-216ENST00000583804 DDX12PQ92771 950 aa12.14□□□□□ -0.47
TOP3A-216ENST00000583804 TIGD1Q96MW7 591 aa12.14□□□□□ -0.47
TOP3A-216ENST00000583804 TOX2Q96NM4 488 aa12.14□□□□□ -0.47
TOP3A-216ENST00000583804 MAP7D2Q96T17 732 aa12.14□□□□□ -0.47
TOP3A-216ENST00000583804 GPRC5CQ9NQ84 441 aa12.14□□□□□ -0.47
TOP3A-216ENST00000583804 XPNPEP1Q9NQW7 623 aa12.14□□□□□ -0.47
TOP3A-216ENST00000583804 PDLIM7Q9NR12 457 aa12.14□□□□□ -0.47
TOP3A-216ENST00000583804 KCND2Q9NZV8 630 aa12.14□□□□□ -0.47
TOP3A-216ENST00000583804 PCDHA5Q9Y5H7 936 aa12.14□□□□□ -0.47
TOP3A-216ENST00000583804 SFI1A8K8P3 1242 aa12.13□□□□□ -0.47
TOP3A-216ENST00000583804 GAS2O43903 313 aaKnown RBP12.13□□□□□ -0.47
TOP3A-216ENST00000583804 HIP1RO75146 1068 aa12.13□□□□□ -0.47
TOP3A-216ENST00000583804 CD4P01730 458 aa12.13□□□□□ -0.47
TOP3A-216ENST00000583804 IDEP14735 1019 aa12.13□□□□□ -0.47
TOP3A-216ENST00000583804 GUCY2CP25092 1073 aa12.13□□□□□ -0.47
TOP3A-216ENST00000583804 THPOP40225 353 aa12.13□□□□□ -0.47
TOP3A-216ENST00000583804 ASIC1P78348 528 aa12.13□□□□□ -0.47
TOP3A-216ENST00000583804 TYRO3Q06418 890 aa12.13□□□□□ -0.47
TOP3A-216ENST00000583804 TMEM62Q0P6H9 643 aa12.13□□□□□ -0.47
TOP3A-216ENST00000583804 PTK7Q13308 1070 aa12.13□□□□□ -0.47
TOP3A-216ENST00000583804 MKRN4PQ13434 485 aaPredicted RBP12.13□□□□□ -0.47
TOP3A-216ENST00000583804 GIT2Q14161 759 aa12.13□□□□□ -0.47
TOP3A-216ENST00000583804 SASS6Q6UVJ0 657 aa12.13□□□□□ -0.47
TOP3A-216ENST00000583804 RHPN2Q8IUC4 686 aa12.13□□□□□ -0.47
TOP3A-216ENST00000583804 KIAA0319LQ8IZA0 1049 aa12.13□□□□□ -0.47
TOP3A-216ENST00000583804 PRPF31Q8WWY3 499 aaKnown RBP12.13□□□□□ -0.47
TOP3A-216ENST00000583804 PSPC1Q8WXF1 523 aaKnown RBP12.13□□□□□ -0.47
TOP3A-216ENST00000583804 SMARCE1Q969G3 411 aa12.13□□□□□ -0.47
TOP3A-216ENST00000583804 CTAGE1Q96RT6 745 aa12.13□□□□□ -0.47
TOP3A-216ENST00000583804 REEP2Q9BRK0 252 aa12.13□□□□□ -0.47
TOP3A-216ENST00000583804 POLR3FQ9H1D9 316 aaPredicted RBP12.13□□□□□ -0.47
TOP3A-216ENST00000583804 HOOK1Q9UJC3 728 aaKnown RBP12.13□□□□□ -0.47
TOP3A-216ENST00000583804 MAN1B1Q9UKM7 699 aa12.13□□□□□ -0.47
TOP3A-216ENST00000583804 KAT6AQ92794 2004 aa12.13□□□□□ -0.47
TOP3A-216ENST00000583804 RSPH10B2B2RC85 870 aa12.12□□□□□ -0.47
TOP3A-216ENST00000583804 GTPBP6O43824 516 aaPredicted RBP12.12□□□□□ -0.47
TOP3A-216ENST00000583804 TBCAO75347 108 aaKnown RBP12.12□□□□□ -0.47
TOP3A-216ENST00000583804 FAM13AO94988 1023 aa12.12□□□□□ -0.47
TOP3A-216ENST00000583804 VTNP04004 478 aa12.12□□□□□ -0.47
TOP3A-216ENST00000583804 RSPH10BP0C881 870 aa12.12□□□□□ -0.47
TOP3A-216ENST00000583804 SRGAP2CP0DJJ0 459 aa12.12□□□□□ -0.47
TOP3A-216ENST00000583804 ARL2P36404 184 aa12.12□□□□□ -0.47
TOP3A-216ENST00000583804 MDM2Q00987 491 aaPredicted RBP12.12□□□□□ -0.47
TOP3A-216ENST00000583804 FAAP100Q0VG06 881 aa12.12□□□□□ -0.47
TOP3A-216ENST00000583804 SH3RF1Q7Z6J0 888 aa12.12□□□□□ -0.47
TOP3A-216ENST00000583804 GAS2L3Q86XJ1 694 aa12.12□□□□□ -0.47
TOP3A-216ENST00000583804 KSR1Q8IVT5 923 aa12.12□□□□□ -0.47
TOP3A-216ENST00000583804 SMYD4Q8IYR2 804 aaPredicted RBP12.12□□□□□ -0.47
TOP3A-216ENST00000583804 LINC01465Q8N7H1 131 aa12.12□□□□□ -0.47
TOP3A-216ENST00000583804 RNF214Q8ND24 703 aa12.12□□□□□ -0.47
TOP3A-216ENST00000583804 KIFAP3Q92845 792 aa12.12□□□□□ -0.47
TOP3A-216ENST00000583804 WNT8BQ93098 351 aa12.12□□□□□ -0.47
TOP3A-216ENST00000583804 HPS3Q969F9 1004 aa12.12□□□□□ -0.47
TOP3A-216ENST00000583804 ZNF668Q96K58 619 aaPredicted RBP12.12□□□□□ -0.47
TOP3A-216ENST00000583804 DRC1Q96MC2 740 aa12.12□□□□□ -0.47
TOP3A-216ENST00000583804 PPP1R16BQ96T49 567 aa12.12□□□□□ -0.47
TOP3A-216ENST00000583804 C7orf25Q9BPX7 421 aa12.12□□□□□ -0.47
TOP3A-216ENST00000583804 HTATIP2Q9BUP3 242 aa12.12□□□□□ -0.47
TOP3A-216ENST00000583804 TIPINQ9BVW5 301 aa12.12□□□□□ -0.47
TOP3A-216ENST00000583804 TRIM9Q9C026 710 aa12.12□□□□□ -0.47
TOP3A-216ENST00000583804 PRDM5Q9NQX1 630 aaPredicted RBP12.12□□□□□ -0.47
TOP3A-216ENST00000583804 TMEM39AQ9NV64 488 aa12.12□□□□□ -0.47
TOP3A-216ENST00000583804 KIAA1468Q9P260 1216 aa12.12□□□□□ -0.47
TOP3A-216ENST00000583804 GINS2Q9Y248 185 aa12.12□□□□□ -0.47
TOP3A-216ENST00000583804 CLTBP09497 229 aa12.11□□□□□ -0.47
TOP3A-216ENST00000583804 CTSHP09668 335 aa12.11□□□□□ -0.47
TOP3A-216ENST00000583804 LAMTOR4Q0VGL1 99 aa12.11□□□□□ -0.47
TOP3A-216ENST00000583804 DPYDQ12882 1025 aa12.11□□□□□ -0.47
TOP3A-216ENST00000583804 C11orf57Q6ZUT1 292 aaPredicted RBP12.11□□□□□ -0.47
TOP3A-216ENST00000583804 DAW1Q8N136 415 aa12.11□□□□□ -0.47
TOP3A-216ENST00000583804 NME8Q8N427 588 aa12.11□□□□□ -0.47
TOP3A-216ENST00000583804 MYCT1Q8N699 235 aa12.11□□□□□ -0.47
TOP3A-216ENST00000583804 DNAJC19Q96DA6 116 aa12.11□□□□□ -0.47
TOP3A-216ENST00000583804 IFT74Q96LB3 600 aa12.11□□□□□ -0.47
TOP3A-216ENST00000583804 NLRP4Q96MN2 994 aa12.11□□□□□ -0.47
TOP3A-216ENST00000583804 SCLT1Q96NL6 688 aa12.11□□□□□ -0.47
TOP3A-216ENST00000583804 TSPY26PQ9H489 355 aa12.11□□□□□ -0.47
TOP3A-216ENST00000583804 GRPEL1Q9HAV7 217 aa12.11□□□□□ -0.47
TOP3A-216ENST00000583804 ODF2LQ9ULJ1 636 aa12.11□□□□□ -0.47
TOP3A-216ENST00000583804 COL4A3BPQ9Y5P4 624 aa12.11□□□□□ -0.47
TOP3A-216ENST00000583804 ARID2Q68CP9 1835 aa12.1□□□□□ -0.47
TOP3A-216ENST00000583804 CCDC169A6NNP5 214 aa12.1□□□□□ -0.47
TOP3A-216ENST00000583804 ASAP2O43150 1006 aa12.1□□□□□ -0.47
TOP3A-216ENST00000583804 LETM1O95202 739 aaPredicted RBP12.1□□□□□ -0.47
TOP3A-216ENST00000583804 SMC2O95347 1197 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms