RNA–Protein interactions for RNA: ENST00000583277.1

SENP3-208, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 1,578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-208ENST00000583277 TRIM32Q13049 653 aa16.16■□□□□ 0.18
SENP3-208ENST00000583277 PPP2R5AQ15172 486 aa16.16■□□□□ 0.18
SENP3-208ENST00000583277 LRRC41Q15345 812 aa16.16■□□□□ 0.18
SENP3-208ENST00000583277 TTI2Q6NXR4 508 aa16.16■□□□□ 0.18
SENP3-208ENST00000583277 PPP4R3CPQ6ZMV5 832 aa16.16■□□□□ 0.18
SENP3-208ENST00000583277 ZNF720Q7Z2F6 126 aa16.16■□□□□ 0.18
SENP3-208ENST00000583277 GLIS3Q8NEA6 775 aa16.16■□□□□ 0.18
SENP3-208ENST00000583277 SPIRE2Q8WWL2 714 aa16.16■□□□□ 0.18
SENP3-208ENST00000583277 TCP11Q8WWU5 503 aa16.16■□□□□ 0.18
SENP3-208ENST00000583277 MED15Q96RN5 788 aa16.16■□□□□ 0.18
SENP3-208ENST00000583277 FIZ1Q96SL8 496 aa16.16■□□□□ 0.18
SENP3-208ENST00000583277 FGFBP2Q9BYJ0 223 aa16.16■□□□□ 0.18
SENP3-208ENST00000583277 RNPEPQ9H4A4 650 aa16.16■□□□□ 0.18
SENP3-208ENST00000583277 ST6GALNAC4Q9H4F1 302 aa16.16■□□□□ 0.18
SENP3-208ENST00000583277 POLD4Q9HCU8 107 aa16.16■□□□□ 0.18
SENP3-208ENST00000583277 TSKSQ9UJT2 592 aa16.16■□□□□ 0.18
SENP3-208ENST00000583277 TRIM17Q9Y577 477 aa16.16■□□□□ 0.18
SENP3-208ENST00000583277 MAGEB2O15479 319 aa16.15■□□□□ 0.18
SENP3-208ENST00000583277 ZEB2O60315 1214 aa16.15■□□□□ 0.18
SENP3-208ENST00000583277 MSCO60682 206 aa16.15■□□□□ 0.18
SENP3-208ENST00000583277 C6orf222P0C671 652 aaPredicted RBP16.15■□□□□ 0.18
SENP3-208ENST00000583277 MYBP10242 640 aa16.15■□□□□ 0.18
SENP3-208ENST00000583277 CASP5P51878 434 aa16.15■□□□□ 0.18
SENP3-208ENST00000583277 PEX3P56589 373 aa16.15■□□□□ 0.18
SENP3-208ENST00000583277 SARM1Q6SZW1 724 aa16.15■□□□□ 0.18
SENP3-208ENST00000583277 RETREG2Q8NC44 543 aa16.15■□□□□ 0.18
SENP3-208ENST00000583277 ZNF507Q8TCN5 953 aa16.15■□□□□ 0.18
SENP3-208ENST00000583277 HVCN1Q96D96 273 aa16.15■□□□□ 0.18
SENP3-208ENST00000583277 FANCLQ9NW38 375 aa16.15■□□□□ 0.18
SENP3-208ENST00000583277 CENPFP49454 3210 aa16.15■□□□□ 0.18
SENP3-208ENST00000583277 EVPLQ92817 2033 aa16.14■□□□□ 0.17
SENP3-208ENST00000583277 IGKV6-21A0A0C4DH24 114 aa16.14■□□□□ 0.17
SENP3-208ENST00000583277 TRIM49BA6NDI0 452 aa16.14■□□□□ 0.17
SENP3-208ENST00000583277 PPP1R37O75864 691 aa16.14■□□□□ 0.17
SENP3-208ENST00000583277 FGFR1OPO95684 399 aaKnown RBP16.14■□□□□ 0.17
SENP3-208ENST00000583277 INHAP05111 366 aa16.14■□□□□ 0.17
SENP3-208ENST00000583277 INSRRP14616 1297 aa16.14■□□□□ 0.17
SENP3-208ENST00000583277 ZNF18P17022 549 aa16.14■□□□□ 0.17
SENP3-208ENST00000583277 CCND3P30281 292 aaPredicted RBP16.14■□□□□ 0.17
SENP3-208ENST00000583277 NMT1P30419 496 aaKnown RBP16.14■□□□□ 0.17
SENP3-208ENST00000583277 GRK4P32298 578 aa16.14■□□□□ 0.17
SENP3-208ENST00000583277 ARL2P36404 184 aa16.14■□□□□ 0.17
SENP3-208ENST00000583277 NCKAP1LP55160 1127 aa16.14■□□□□ 0.17
SENP3-208ENST00000583277 PPFIA1Q13136 1202 aa16.14■□□□□ 0.17
SENP3-208ENST00000583277 KNOP1Q1ED39 458 aaKnown RBP16.14■□□□□ 0.17
SENP3-208ENST00000583277 IER5Q5VY09 327 aa16.14■□□□□ 0.17
SENP3-208ENST00000583277 HSD3B7Q9H2F3 369 aa16.14■□□□□ 0.17
SENP3-208ENST00000583277 SEMA6BQ9H3T3 888 aa16.14■□□□□ 0.17
SENP3-208ENST00000583277 FRMPD3Q5JV73 1810 aa16.14■□□□□ 0.17
SENP3-208ENST00000583277 SIP14410 1827 aa16.14■□□□□ 0.17
SENP3-208ENST00000583277 RRN3P2A6NIE6 340 aa16.13■□□□□ 0.17
SENP3-208ENST00000583277 MYL3P08590 195 aa16.13■□□□□ 0.17
SENP3-208ENST00000583277 NAMPTP43490 491 aa16.13■□□□□ 0.17
SENP3-208ENST00000583277 NPTX2P47972 431 aa16.13■□□□□ 0.17
SENP3-208ENST00000583277 DNM2P50570 870 aa16.13■□□□□ 0.17
SENP3-208ENST00000583277 PMS1P54277 932 aaKnown RBP16.13■□□□□ 0.17
SENP3-208ENST00000583277 PLCB2Q00722 1185 aa16.13■□□□□ 0.17
SENP3-208ENST00000583277 SPAG1Q07617 926 aa16.13■□□□□ 0.17
SENP3-208ENST00000583277 MFSD10Q14728 455 aa16.13■□□□□ 0.17
SENP3-208ENST00000583277 ZCWPW2Q504Y3 356 aa16.13■□□□□ 0.17
SENP3-208ENST00000583277 CDKAL1Q5VV42 579 aa16.13■□□□□ 0.17
SENP3-208ENST00000583277 ANKRD40Q6AI12 368 aa16.13■□□□□ 0.17
SENP3-208ENST00000583277 NELFCDQ8IXH7 590 aa16.13■□□□□ 0.17
SENP3-208ENST00000583277 CSGALNACT2Q8N6G5 542 aa16.13■□□□□ 0.17
SENP3-208ENST00000583277 PSPC1Q8WXF1 523 aaKnown RBP16.13■□□□□ 0.17
SENP3-208ENST00000583277 TMEM143Q96AN5 459 aa16.13■□□□□ 0.17
SENP3-208ENST00000583277 NTPCRQ9BSD7 190 aaKnown RBP16.13■□□□□ 0.17
SENP3-208ENST00000583277 STRA6Q9BX79 667 aa16.13■□□□□ 0.17
SENP3-208ENST00000583277 KCTD10Q9H3F6 313 aa16.13■□□□□ 0.17
SENP3-208ENST00000583277 THAP9Q9H5L6 903 aa16.13■□□□□ 0.17
SENP3-208ENST00000583277 XPNPEP3Q9NQH7 507 aa16.13■□□□□ 0.17
SENP3-208ENST00000583277 KMT5AQ9NQR1 393 aa16.13■□□□□ 0.17
SENP3-208ENST00000583277 DDX20Q9UHI6 824 aaKnown RBP16.13■□□□□ 0.17
SENP3-208ENST00000583277 SCN10AQ9Y5Y9 1956 aa16.13■□□□□ 0.17
SENP3-208ENST00000583277 CCDC169A6NNP5 214 aa16.13■□□□□ 0.17
SENP3-208ENST00000583277 PRPF6O94906 941 aaKnown RBP16.13■□□□□ 0.17
SENP3-208ENST00000583277 C22orf31O95567 290 aa16.13■□□□□ 0.17
SENP3-208ENST00000583277 CST5P28325 142 aaPredicted RBP16.13■□□□□ 0.17
SENP3-208ENST00000583277 SOX10P56693 466 aa16.13■□□□□ 0.17
SENP3-208ENST00000583277 GTF2BQ00403 316 aa16.13■□□□□ 0.17
SENP3-208ENST00000583277 PURAQ00577 322 aaKnown RBP16.13■□□□□ 0.17
SENP3-208ENST00000583277 BEX3Q00994 111 aa16.13■□□□□ 0.17
SENP3-208ENST00000583277 MXD4Q14582 209 aaPredicted RBP16.13■□□□□ 0.17
SENP3-208ENST00000583277 GRIK4Q16099 956 aa16.13■□□□□ 0.17
SENP3-208ENST00000583277 KIAA0753Q2KHM9 967 aa16.13■□□□□ 0.17
SENP3-208ENST00000583277 EDRF1Q3B7T1 1238 aa16.13■□□□□ 0.17
SENP3-208ENST00000583277 GNASQ5JWF2 1037 aa16.13■□□□□ 0.17
SENP3-208ENST00000583277 HAUS6Q7Z4H7 955 aa16.13■□□□□ 0.17
SENP3-208ENST00000583277 FAM114A1Q8IWE2 563 aa16.13■□□□□ 0.17
SENP3-208ENST00000583277 DNAJC5GQ8N7S2 189 aa16.13■□□□□ 0.17
SENP3-208ENST00000583277 ANKRD20A12PQ8NF67 263 aa16.13■□□□□ 0.17
SENP3-208ENST00000583277 GOLGA5Q8TBA6 731 aa16.13■□□□□ 0.17
SENP3-208ENST00000583277 BSNDQ8WZ55 320 aa16.13■□□□□ 0.17
SENP3-208ENST00000583277 KAT2BQ92831 832 aa16.13■□□□□ 0.17
SENP3-208ENST00000583277 KCNN1Q92952 543 aa16.13■□□□□ 0.17
SENP3-208ENST00000583277 DUSP9Q99956 384 aaKnown RBP16.13■□□□□ 0.17
SENP3-208ENST00000583277 TMEM206Q9H813 350 aa16.13■□□□□ 0.17
SENP3-208ENST00000583277 TYW1Q9NV66 732 aaKnown RBP16.13■□□□□ 0.17
SENP3-208ENST00000583277 PTCH2Q9Y6C5 1203 aa16.13■□□□□ 0.17
SENP3-208ENST00000583277 NRCAMQ92823 1304 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms