RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 POTECB2RU33 542 aa6.31□□□□□ -1.4
RTTN-209ENST00000583043 TCP10L2B9ZVM9 353 aa6.31□□□□□ -1.4
RTTN-209ENST00000583043 BUB1O43683 1085 aa6.31□□□□□ -1.4
RTTN-209ENST00000583043 PALMO75781 387 aa6.31□□□□□ -1.4
RTTN-209ENST00000583043 CYP11B2P19099 503 aa6.31□□□□□ -1.4
RTTN-209ENST00000583043 CDC25AP30304 524 aa6.31□□□□□ -1.4
RTTN-209ENST00000583043 AARSP49588 968 aaKnown RBP eCLIP6.31□□□□□ -1.4
RTTN-209ENST00000583043 LRRC41Q15345 812 aa6.31□□□□□ -1.4
RTTN-209ENST00000583043 POTEBQ6S5H4 581 aa6.31□□□□□ -1.4
RTTN-209ENST00000583043 BZW1Q7L1Q6 419 aaKnown RBP6.31□□□□□ -1.4
RTTN-209ENST00000583043 SLC9A9Q8IVB4 645 aa6.31□□□□□ -1.4
RTTN-209ENST00000583043 BCAS4Q8TDM0 211 aa6.31□□□□□ -1.4
RTTN-209ENST00000583043 RAB3IPQ96QF0 476 aaPredicted RBP6.31□□□□□ -1.4
RTTN-209ENST00000583043 IL17RBQ9NRM6 502 aa6.31□□□□□ -1.4
RTTN-209ENST00000583043 BCAP29Q9UHQ4 241 aa6.31□□□□□ -1.4
RTTN-209ENST00000583043 DTNBO60941 627 aa6.3□□□□□ -1.4
RTTN-209ENST00000583043 NR1D1P20393 614 aa6.3□□□□□ -1.4
RTTN-209ENST00000583043 OSBPP22059 807 aa6.3□□□□□ -1.4
RTTN-209ENST00000583043 STXBP2Q15833 593 aa6.3□□□□□ -1.4
RTTN-209ENST00000583043 ARHGAP44Q17R89 818 aa6.3□□□□□ -1.4
RTTN-209ENST00000583043 DALRD3Q5D0E6 543 aaKnown RBP6.3□□□□□ -1.4
RTTN-209ENST00000583043 XKR3Q5GH77 459 aa6.3□□□□□ -1.4
RTTN-209ENST00000583043 CYFIP1Q7L576 1253 aa6.3□□□□□ -1.4
RTTN-209ENST00000583043 PPM1KQ8N3J5 372 aa6.3□□□□□ -1.4
RTTN-209ENST00000583043 CHST13Q8NET6 341 aa6.3□□□□□ -1.4
RTTN-209ENST00000583043 MAGOHBQ96A72 148 aaKnown RBP6.3□□□□□ -1.4
RTTN-209ENST00000583043 ZNF653Q96CK0 615 aa6.3□□□□□ -1.4
RTTN-209ENST00000583043 ISCUQ9H1K1 167 aa6.3□□□□□ -1.4
RTTN-209ENST00000583043 DBNDD1Q9H9R9 158 aa6.3□□□□□ -1.4
RTTN-209ENST00000583043 ZHX1Q9UKY1 873 aaPredicted RBP6.3□□□□□ -1.4
RTTN-209ENST00000583043 L1RE1Q9UN81 338 aa6.3□□□□□ -1.4
RTTN-209ENST00000583043 NUP188Q5SRE5 1749 aa6.3□□□□□ -1.4
RTTN-209ENST00000583043 ASAP2O43150 1006 aa6.3□□□□□ -1.4
RTTN-209ENST00000583043 ZEB2O60315 1214 aa6.3□□□□□ -1.4
RTTN-209ENST00000583043 HNRNPCL1O60812 293 aaKnown RBP6.3□□□□□ -1.4
RTTN-209ENST00000583043 CD44P16070 742 aaKnown RBP6.3□□□□□ -1.4
RTTN-209ENST00000583043 MAPK4P31152 587 aa6.3□□□□□ -1.4
RTTN-209ENST00000583043 FMO5P49326 533 aa6.3□□□□□ -1.4
RTTN-209ENST00000583043 CYP4A11Q02928 519 aa6.3□□□□□ -1.4
RTTN-209ENST00000583043 BYSLQ13895 437 aaKnown RBP6.3□□□□□ -1.4
RTTN-209ENST00000583043 MICALL1Q8N3F8 863 aa6.3□□□□□ -1.4
RTTN-209ENST00000583043 RIBC1Q8N443 379 aaPredicted RBP6.3□□□□□ -1.4
RTTN-209ENST00000583043 ANKRD36BP1Q96IX9 119 aa6.3□□□□□ -1.4
RTTN-209ENST00000583043 CEP170P1Q96L14 293 aa6.3□□□□□ -1.4
RTTN-209ENST00000583043 EFCC1Q9HA90 598 aa6.3□□□□□ -1.4
RTTN-209ENST00000583043 PRR12Q9ULL5 1215 aa6.3□□□□□ -1.4
RTTN-209ENST00000583043 FAN1Q9Y2M0 1017 aa6.3□□□□□ -1.4
RTTN-209ENST00000583043 ICAM1P05362 532 aa6.3□□□□□ -1.4
RTTN-209ENST00000583043 TM4SF1P30408 202 aa6.3□□□□□ -1.4
RTTN-209ENST00000583043 FNTAP49354 379 aa6.3□□□□□ -1.4
RTTN-209ENST00000583043 PLCB3Q01970 1234 aa6.3□□□□□ -1.4
RTTN-209ENST00000583043 PPP2R5CQ13362 524 aa6.3□□□□□ -1.4
RTTN-209ENST00000583043 LDHDQ86WU2 507 aa6.3□□□□□ -1.4
RTTN-209ENST00000583043 FBXL13Q8NEE6 735 aa6.3□□□□□ -1.4
RTTN-209ENST00000583043 ATP6V1G3Q96LB4 118 aa6.3□□□□□ -1.4
RTTN-209ENST00000583043 ACAD9Q9H845 621 aa6.3□□□□□ -1.4
RTTN-209ENST00000583043 HOMER2Q9NSB8 354 aa6.3□□□□□ -1.4
RTTN-209ENST00000583043 TMEM260Q9NX78 707 aa6.3□□□□□ -1.4
RTTN-209ENST00000583043 ZBTB21Q9ULJ3 1066 aa6.3□□□□□ -1.4
RTTN-209ENST00000583043 AGTPBP1Q9UPW5 1226 aa6.3□□□□□ -1.4
RTTN-209ENST00000583043 A0A087WWV3 80 aa6.3□□□□□ -1.4
RTTN-209ENST00000583043 TESPA1A2RU30 521 aaPredicted RBP6.3□□□□□ -1.4
RTTN-209ENST00000583043 RNF8O76064 485 aa6.3□□□□□ -1.4
RTTN-209ENST00000583043 SUN1O94901 812 aa6.3□□□□□ -1.4
RTTN-209ENST00000583043 FCER1AP12319 257 aa6.3□□□□□ -1.4
RTTN-209ENST00000583043 GARTP22102 1010 aa6.3□□□□□ -1.4
RTTN-209ENST00000583043 IL9RQ01113 521 aa6.3□□□□□ -1.4
RTTN-209ENST00000583043 CYP27A1Q02318 531 aa6.3□□□□□ -1.4
RTTN-209ENST00000583043 BFSP1Q12934 665 aa6.3□□□□□ -1.4
RTTN-209ENST00000583043 BEND6Q5SZJ8 279 aaPredicted RBP6.3□□□□□ -1.4
RTTN-209ENST00000583043 GPD1LQ8N335 351 aa6.3□□□□□ -1.4
RTTN-209ENST00000583043 C4orf32Q8N8J7 132 aa6.3□□□□□ -1.4
RTTN-209ENST00000583043 TMEM35BQ8NCS4 154 aa6.3□□□□□ -1.4
RTTN-209ENST00000583043 SPIRE2Q8WWL2 714 aa6.3□□□□□ -1.4
RTTN-209ENST00000583043 AGPAT1Q99943 283 aa6.3□□□□□ -1.4
RTTN-209ENST00000583043 KLHL14Q9P2G3 628 aa6.3□□□□□ -1.4
RTTN-209ENST00000583043 PNMA3Q9UL41 463 aa6.3□□□□□ -1.4
RTTN-209ENST00000583043 IVNS1ABPQ9Y6Y0 642 aa6.3□□□□□ -1.4
RTTN-209ENST00000583043 USP17L15C9J2P7 530 aa6.3□□□□□ -1.4
RTTN-209ENST00000583043 USP17L13C9JLJ4 530 aa6.3□□□□□ -1.4
RTTN-209ENST00000583043 USP17L11C9JVI0 530 aa6.3□□□□□ -1.4
RTTN-209ENST00000583043 USP17L18D6R9N7 530 aa6.3□□□□□ -1.4
RTTN-209ENST00000583043 USP17L22D6RA61 530 aa6.3□□□□□ -1.4
RTTN-209ENST00000583043 USP17L17D6RBQ6 530 aa6.3□□□□□ -1.4
RTTN-209ENST00000583043 USP17L19D6RCP7 530 aa6.3□□□□□ -1.4
RTTN-209ENST00000583043 USP17L20D6RJB6 530 aa6.3□□□□□ -1.4
RTTN-209ENST00000583043 BUB1BO60566 1050 aaPredicted RBP6.3□□□□□ -1.4
RTTN-209ENST00000583043 LYPLA2O95372 231 aa6.3□□□□□ -1.4
RTTN-209ENST00000583043 TMEM191BP0C7N4 346 aa6.3□□□□□ -1.4
RTTN-209ENST00000583043 MNAT1P51948 309 aa6.3□□□□□ -1.4
RTTN-209ENST00000583043 RHBDL3P58872 404 aa6.3□□□□□ -1.4
RTTN-209ENST00000583043 CENPCQ03188 943 aa6.3□□□□□ -1.4
RTTN-209ENST00000583043 USP17L24Q0WX57 530 aa6.3□□□□□ -1.4
RTTN-209ENST00000583043 C11orf63Q6NUN7 778 aa6.3□□□□□ -1.4
RTTN-209ENST00000583043 USP17L6PQ6QN14 398 aa6.3□□□□□ -1.4
RTTN-209ENST00000583043 C12orf56Q8IXR9 622 aa6.3□□□□□ -1.4
RTTN-209ENST00000583043 CCDC24Q8N4L8 307 aa6.3□□□□□ -1.4
RTTN-209ENST00000583043 CCDC197Q8NCU1 140 aa6.3□□□□□ -1.4
RTTN-209ENST00000583043 DYDC2Q96IM9 177 aa6.3□□□□□ -1.4
RTTN-209ENST00000583043 PSMD1Q99460 953 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms